Replication regions from plant-pathogenic Pseudomonas syringae plasmids are similar to ColE2-related replicons

Microbiology

Volumn 145, Issue 2, 1999, Pages 325-334

  Gibbon, Marjorie J ^a   Sesma, Ane ^b   Canal, Arantzazu ^b   Wood, John R ^a,d   Hidalgo, Elena ^c   Brown, Judy ^a   Vivian, Alan ^a   Murillo, Jesus ^b  

^a UNIVERSITY OF THE WEST OF ENGLAND   (United Kingdom)

^b PUBLIC UNIVERSITY OF NAVARRE   (Spain)

^c Escla Tec Sup de Ing Agraria   (Spain)

^d Science and Advice for Scottish Agriculture   (United Kingdom)

Author keywords

Incompatibility; PPT23A like plasmids; Pseudomonas syringae pvs tomato and phaseolicola; UV light resistance; Virulence

Indexed keywords

BACTERIAL DNA;

ARTICLE; BACTERIAL VIRULENCE; CARBOXY TERMINAL SEQUENCE; DNA REPLICATION ORIGIN; DNA SEQUENCE; ESCHERICHIA COLI; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PATHOGENICITY; PLASMID; PRIORITY JOURNAL; PSEUDOMONAS SYRINGAE; REPLICON; THIOBACILLUS;

PSEUDOMONAS SYRINGAE;

EID: 0032993614     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/13500872-145-2-325     Document Type: Article

References (54)

1. Ankri, S., Bouvier, I., Reyes, O., Predali, F. & Leblon, G. (1996). A Brevibacterium linens pRBL1 replicon functional in Corynebacterium glutamicum. Plasmid 36, 36-41.
2. Austin, S. & Nordström, K. (1990). Partition-mediated incompatibility of bacterial plasmids. Cell 60, 351-354.
3. Bender, C. & Cooksey, D. (1986). Indigenous plasmids in Pseudomonas syringae pv. tomato: conjugative transfer and role in copper resistance. J Bacteriol 165, 534-541.
4. Bender, C. L., Stone, H. E., Sims, J. J. & Cooksey, D. A. (1987). Reduced pathogen fitness of Pseudomonas syringae pv. tomato Tn5 mutants defective in coronatine production. Physiol Mol Plant Pathol 30, 273-283.
5. Bender, C. L., Malvick, D. K. & Mitchell, R. E. (1989). Plasmid-mediated production of the phytotoxin coronatine in Pseudomonas syringae pv. tomato. J Bacteriol 171, 807-812.
6. Bonas, U., Stall, R. E. & Staskawicz, B. J. (1989). Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomanas campestris pv. vesicatoria. Mol Gen Genet 218, 127-136.
7. Comai, L. & Kosuge, T. (1980). Involvement of plasmid deoxyrihonucleic acid in indoleacetic acid synthesis in Pseudomonas savastanoi. J Bacteriol 143, 950-957.
8. Cooksey, D. A. (1990). Genetics of bactericide resistance in plant pathogenic bacteria. Annu Rev Phytopathol 28, 201-219.
9. Coplin, D. L. (1989). Plasmids and their role in the evolution of plant pathogenic bacteria. Annu Rev Phytopathol 27, 187-212.
10. Crouse, G. F., Frischauf, A. & Lehrach, H. (1983). An integrated and simplified approach for cloning into plasmids and single-stranded phages. Methods Enzymol 101, 78-89.
11. Curiale, M. S. & Mills, D. (1983). Molecular relatedness among cryptic plasmids in Pseudomonas syringae pv. glycinea. Phytopathology 73, 1440-1444.
12. Dangl, J., Ritter, C., Gibbon, M. J., Mur, L. A. J., Wood, J. R., Goss, G., Mansfield, J., Taylor, J. D. & Vivian, A. (1992). Functional homologs of the Arabidopsis RPM1 disease resistance gene in bean and pea. Plant Cell 4, 1359-1369.
13. De Mot, R., Nagy, I., De Schrijver, A., Pattanapipitpaisal, P., Schoofs, G. & Vanderleyden, J. (1997). Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectors. Microbiology 143, 3137-3147.
14. Devereux, J., Haeberli, P. & Smithies, O. (1984). A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12, 387-395.
15. English, R. S., Lorbach, S. C., Huffman, K. M. & Shively, J. M. (1995). Isolation and characterization of the replicon of a Thiobacillus intermedius plasmid. Plasmid 33, 1-6.
16. Gallagher, S. R. (1992). Quantitation of GUS activity by fluorometry. In GUS Protocols, pp. 47-59. Edited by S. R. Gallagher. San Diego, CA: Academic Press.
17. Hidalgo, E., Palacios, J. M., Murillo, J. & Ruiz-Argüeso, T. (1992). Nucleotide sequence and characterization of four additional genes of the hydrogenase structural operon from Rhizobium leguminosarum bv. viciae, J Bacteriol 174, 4130-4139.
18. Hiraga, S., Sugiyama, T. & Itoh, T. (1994). Comparative analysis of the replicon regions of eleven ColEZ-related plasmids. J Bacteriol 176, 7233-7243.
19. Holt, J. G., Krieg, N. R., Sneath, P. H. A., Staley, J. T. & Williams, S. T. (1994). Bergey's Manual of Determinative Bacteriology, 9th edn. Baltimore: Williams & Wilkins.
20. Jackson, R. (1997). Plasmids and virulence in Pseudomonas syringae pv. phaseolicola. PhD thesis, University of the West of England.
21. Jobling, M. G. & Holmes, R. K. (1990). Construction of vectors with the p15a replicon, kanamycin resistance, inducible lacZα and pUC18 or pUC19 multiple cloning sites. Nucleic Acids Res 18, 5315-5316.
22. Kamiunten, H. (1995). Involvement of a plasmid in the expression of virulence of Pseudomonas syringae pv. eriobotryae. Ann Phytopathol Soc Jpn 61, 376-380.
23. Keen, N. T., Tamaki, S., Kobayashi, D. & Trollinger, D. (1988). Improved broad-host-range plasmids for DNA cloning in Gram-negative bacteria. Gene 70, 191-197.
24. Keen, N. T., Shen, H. & Cooksey, D. A. (1992). Introduction of DNA into plant pathogenic hacteria. In Molecular Plant Pathology. A Practical Approach, pp. 45-50. Edited by S. J. Gurr, M. J. McPherson & D. J. Bowles. Oxford: IRL Press.
25. King, E. O., Ward, N. K. & Raney, D. E. (1954). Two simple media for the demonstration of pyocyanin and fluorescein. J Lab Clin Med 44, 301-307.
26. Kobayashi, D. Y., Tamaki, S. J. & Keen, N.T. (1990). Molecular characterization of avirulence gene D from Pseudomonas syringae pv. tomato. Mol Plant-Microbe Interact 3, 94-102.
27. Korch, C, Hagblom, P., Ohman, H., Goransson, M. & Normark, S. (1985). Cryptic plasmid of Neisseria gonorrhoeae: complete nucleotide sequence and genetic organization. J Bacteriol 163, 430-438.
28. Mukhopadhyay, P., Mukhopadhyay, M. & Mills, D. (1990). Construction of a stable shuttle vector for high-frequency transformation in Pseudomonas syringae pv. syringae. J Bacteriol 172, 477-480.
29. Murillo, J. & Keen, N.T. (1994). Two native plasmids of Pseudomonas syringae pathovar tomato strain PT23 share a large amount of repeated DNA, including replication sequences. Mol Microbiol 12, 941-950.
30. Murillo, J., Shen, H., Gerhold, D., Sharma, A. K., Cooksey, D. A. & Keen, N.T. (1994). Characterization of pPT23B, the plasmid involved in syringolide production by Pseudomonas syringae pv. tomato. Plasmid 31, 275-287.
31. Nagahama, K., Yoshino, K., Matsuoka, M., Sato, M., Tanase, S., Ogawa, T. & Fukuda, H. (1994). Ethylene production by strains of the plant-pathogenic bacterium Pseudomonas syringae depends upon the presence of indigenous plasmids carrying homologous genes for the ethylene-forming enzyme. Microbiology 140, 2309-2313.
32. Nieto, C., Giraldo, R., Fernández-Tresguerres, E. & Díaz, R. (1992). Genetic and functional analysis of the basic replicon of pPS10, a plasmid specific for Pseudomonas isolated from Pseudomonas syringae pathovar savastanoi. J Mol Biol 223, 415-426.
33. Nordström, K. (1993). Plasmid replication and maintenance. In Plasmids: a Practical Approach, pp. 1-38. Edited by K. G. Hardy. New York: Oxford University Press.
34. Nordström, K. & Austin, S. J. (1989). Mechanisms that contribute to the stable segregation of plasmids. Annu Rev Genet 23, 37-69.
35. Novick, R. P. (1987). Plasmid incompatibility. Microbiol Rev 51, 381-395.
36. Page, R. D. M. (1996). TREEVIEW: an application to display phylogenetic trees on personal computers. Compitt Appl Biosci 12, 357-358.
37. Palleroni, N. J. (1984). Genus I. Pseudomonas. In Bergey's Manual of Systematic Bacteriology, vol. 1, pp. 141-199. Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins.
38. Rauzier, J., Moniz-Pereira, J. & Gicquel-Sanzey, B. (1988). Complete nucleotide sequence of pAL5000, a plasmid from Mycobacterium fortuitum. Gene 71, 315-321.
39. Rina, M., Caufrier, F., Markaki, M., Mavromatis, K., Kokkinidis, M. & Bouriotis, V. (1997). Cloning and characterization of the gene encoding PspPI methyltransferase from the antarctic psychrophile Psychrobacter sp. strain TA137. Predicted interactions with DNA and organization of the variable region. Gene 197, 353-360.
40. Rossi, M., Brigidi, P., Gonzalez Vara y Rodriguez, A. & Matteuzzi, D. (1996). Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction. Res Microbiol 147, 133-143.
41. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning : a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
42. Sesma, A., Ortiz, A., Bacáicoa, B., Etuláin, D., Aizpún, M. T., Canal, A. & Murillo, J. (1997). Analysis of plasmid determined phenotypes in Pseudomonas syringae: evidence for plasmid involvement in virulence in P. s. pv. tomato strain PT23. In 10th Congress of the Mediterranean Phytopathological Union, pp. 475-480. Montpellier, France: Société Française de Phytopathologie.
43. Sesma, A., Sundin, G. & Murillo, J. (1998). Closely related replicons coexisting in the phytopathogen Pseudomonas syringae show a mosaic organization of the replication region and an altered incompatibility behavior. Appl Environ Microbiol 64, 3948-3953.
44. del Solar, G., Giraldo, R., Ruiz-Echevarría, M. J., Espinosa, M. & Díaz-Orejas, R. (1998). Replication and control of circular bacterial plasmids. Microbiol Mol Biol Rev 62, 434-464.
45. Stachel, S. E., An, G., Flores, C. W. & Nester, E. W. (1985). A Tn3lacZ transposon for the random generation of β-galactosidase gene fusions: application to the analysis of gene expression in Agrobacterium. EMBO J 4, 891-898.
46. Studier, F. W. & Moffatt, B. A. (1986). Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189, 113-130.
47. Sundin, G. W. & Bender, C. L. (1993). Ecological and genetic analysis of copper and streptomycin resistance in Pseudomonas syringae pv. syringae. Appl Environ Microbiol 59, 1018-1024.
48. Sundin, G. W. & Bender, C. L. (1996). Molecular analysis of closely related copper- and streptomycin-resistance plasmids in Pseudomonas syringae pv. syringae. Plasmid 35, 98-107.
49. Sundin, G. W., Demezas, D. H. & Bender, C. L. (1994). Genetic and plasmid diversity within natural populations of Pseudomonas syringae with various exposures to copper and streptomycin bactericides. Appl Environ Microbiol 60, 4421-4431.
50. Sundin, G. W., Kidambi, S. P., Ullrich, M. & Bender, C. L. (1996). Resistance to ultraviolet light in Pseudomonas syringae: sequence and functional analysis of the plasmid-encoded rulAB genes. Gene 177, 77-81.
51. Vivian, A. & Gibbon, M. J. (1997). A virulence genes in plant-pathogenic bacteria: signals or weapons? Microbiology 143, 693-704.
52. West, S. E. H., Schweizer, H. P., Dall, C., Sample, A. K. & Runyen-Janecky, L. J. (1994). Construction of improved Escherichia-Pseudomonas shuttle vectors derived from pUC18/19 and sequence of the region required for their replication in Pseudomonas aeruginosa. Gene 128, 81-86.
53. Wood, J. R., Vivian, A., Jenner, C., Mansfield, J. W. & Taylor, J. D. (1994). Detection of a gene in pea controlling non-host resistance to Pseudomonas syringae pv. phaseolicola. Mol Plant-Microbe Interact 7, 534-537.
54. Zhou, C, Yang, Y. & Jong, A. Y. (1990). Miniprep in ten minutes. Biotechniques 8, 172-173.