A TATA-binding protein mutant defective for TFIID complex formation in vivo

Molecular and Cellular Biology

Volumn 19, Issue 6, 1999, Pages 3951-3957

  Ranallo, Ryan T ^b   Struhl, Kevin ^a   Stargell, Laurie A ^b  

^a HARVARD MEDICAL SCHOOL   (United States)

^b Immunology and Pathology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE; DNA DIRECTED RNA POLYMERASE III; TATA BINDING PROTEIN;

ARTICLE; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN INTERACTION; PROTEIN ISOLATION; TEMPERATURE SENSITIVE MUTANT; TRANSCRIPTION INITIATION; YEAST;

EID: 0032973825     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.19.6.3951     Document Type: Article

References (62)

1. II present in TFIID and SAGA. Mol. Cell 2:653-661.
2. 2/M but not for general transcription activation. Genes Dev. 10:2368-2380.
3. II130. Mol. Cell. Biol. 17:3081-3093.
4. II60 of Drosophila. Genes Dev. 11:3020-3031.
5. Burley, S. K., and R. G. Roeder. 1996. Biochemistry and structural biology of transcription factor IID (TFIID). Annu. Rev. Biochem. 65:769-799.
6. Chatterjee, S., and K. Struhl. 1995. Connecting a promoter-bound protein to the TATA-binding protein overrides the need for a transcriptional activation region. Nature 374:820-822.
7. Chen, J.-L., L. D. Attardi, C. P. Verrijzer, K. Yokomori, and R. Tjian. 1994. Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators. Cell 79:93-105.
8. Colgan, J., and J. L. Manley. 1992. TFIID can be rate limiting in vivo for TATA-containing, but not TATA-lacking, RNA polymerase II promoters. Genes Dev. 6:304-315.
9. Cormack, B. P., M. Strubin, A. S. Ponticelli, and K. Struhl. 1991. Functional differences between yeast and human TFIID are localized to the highly conserved region. Cell 65:341-348.
10. Cormack, B. P., M. Strubin, L. A. Stargell, and K. Struhl. 1994. Conserved and nonconserved functions of yeast and human TATA-binding proteins. Genes Dev. 8:1335-1343.
11. Cormack, B. P., and K. Struhl. 1993. Regional codon randomization: defining a TATA-binding protein surface required for RNA polymerase III transcription. Science 262:244-248.
12. Drysdale, C. M., B. M. Jackson, R. McVeigh, E. R. Klebanow, Y. Bai, T. Kokubo, M. Swanson, Y. Nakatani, P. A. Weil, and A. G. Hinnebusch. 1998. The Gcn-4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex. Mol. Cell. Biol. 18:1711-1724.
13. Geiger, J. H., S. Hahn, S. Lee, and P. B. Sigler. 1996. Crystal structure of the yeast TFIIA/TBP/DNA complex. Science 272:830-836.
14. Gonzalez-Couto, E., N. Klages, and M. Strubin. 1997. Synergistic and promoter-selective activation of transcription by recruitment of transcription factors TFIID and TFIIB. Proc. Natl. Acad. Sci. USA 94:8036-8041.
15. II40 interacts with both a VP16 activation domain and the basal transcription factor TFIIB. Cell 75:519-530.
16. IIS are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation. Cell 94:45-53.
17. Hoey, T., R. O. J. Weinzierl, G. Gill, J.-L. Chen, B. D. Dynlacht, and R. Tjian. 1993. Molecular cloning and functional analysis of Drosophila TAF110 reveal properties expected of coactivators. Cell 72:247-260.
18. Holstege, F. C. P., E. G. Jennings, C. J. Wyrick, T. I. Lee, C. J. Hengartner, M. R. Green, T. R. Golub, E. S. Lander, and R. A. Young. 1998. Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95:717-728.
19. Ingles, C. J., M. Shales, W. D. Cress, S. J. Triezenberg, and J. Greenblatt. 1991. Reduced binding of TFIID to transcriptionally compromised mutants of VP16. Nature 351:588-590.
20. Iyer, V., and K. Struhl. 1996. Absolute mRNA levels and transcriptional initiation rates in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 93: 5208-5212.
21. Joliot, V., M. Demma, and R. Prywes. 1995. Interaction with RAP74 subunit of TFIIF is required for transcriptional activation by serum response factor. Nature 373:632-635.
22. Keaveney, M., and K. Struhl. 1998. Activator-mediated recruitment of the RNA polymerase II machinery is the predominant mechanism for transcriptional activation in yeast. Mol. Cell 1:917-924.
23. Kim, J. L., D. B. Nikolov, and S. K. Burley. 1993. Co-crystal structure of TBP recognizing the minor groove of a TATA element. Nature 365:520-527.
24. Kim, Y.-J., S. Bjorklund, Y. Li, M. H. Sayre, and R. D. Kornberg. 1994. A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II. Cell 77:599-608.
25. Klages, N., and M. Strubin. 1995. Stimulation of RNA polymerase II transcription initiation by recruitment of TBP in vivo. Nature 374:822-823.
26. Klein, C., and K. Struhl. 1994. Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivo. Science 266:280-282.
27. Koleske, A. J., and R. A. Young. 1994. An RNA polymerase II holoenzyme responsive to activators. Nature 368:466-469.
28. Lin, Y.-S., I. Ha, E. Maldonado, D. Reinberg, and M. R. Green. 1991. Binding of general transcription factor TFIIB to an acidic activating region. Nature 353:569-571.
29. Martinez, E., Q. A. Zhou, N. D. Letoile, T. Oelgeschlager, A. J. Berk, and R. G. Roeder. 1995. Core promoter-specific function of a mutant transcription factor TFIID defective in TATA-box binding. Proc. Natl. Acad. Sci. USA 92:11864-11868.
30. Michel, B., P. Komarnitsky, and S. Buratowski. 1998. Histone-like TAFs are essential for transcription in vivo. Mol. Cell 2:663-672.
31. Moqtaderi, Z., Y. Bai, D. Poon, P. A. Weil, and K. Struhl. 1996. TBP-associated factors are not generally required for transcriptional activation in yeast. Nature 383:188-191.
32. Moqtaderi, Z., M. Keaveney, and K. Struhl. 1998. The histone H3-like TAF is broadly required for transcription in yeast. Mol. Cell 2:675-682.
33. Moqtaderi, Z., J. D. Yale, K. Struhl, and S. Buratowski. 1996. Yeast homologues of higher eukaryotic TFIID subunits. Proc. Natl. Acad. Sci. USA 93: 14654-14658.
34. Nikolov, D. B., and S. K. Burley. 1997. RNA polymerase II transcription initiation: a structural view. Proc. Natl. Acad. Sci. USA 94:15-22.
35. Nikolov, D. B., H. Chen, E. D. Halay, A. A. Usheva, K. Hisatake, D. K. Lee, R. G. Roeder, and S. K. Burley. 1995. Crystal structure of a TFIIB-TBP-TATA-elemem ternary complex. Nature 377:119-128.
36. Nogi, Y., R. Yano, and M. Nomura. 1991. Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I. Proc. Natl. Acad. Sci. USA 88:3962-3966.
37. IIS. Mol. Cell 1:925-931.
38. Ogryzko, V. V., T. Kotani, X. Zhang, R. L. Schiltz, T. Howard, X.-J. Yang, B. H. Howard, J. Qin, and Y. Nakatani. 1998. Histone-like TAFs within the PCAF histone acetylase complex. Cell 94:35-44.
39. Ozer, J., P. A. Moore, A. H. Bolden, A. Lee, C. A. Rosen, and P. M. Lieberman. 1994. Molecular cloning of the small (g) subunit of human TFIIA reveals functions critical for activated transcription. Genes Dev. 8:2324-2335.
40. Ptashne, M., and A. Gann. 1997. Transcriptional activation by recruitment. Nature 386:569-577.
41. IIS in a multisubunit complex required for activated transcription. Nature 371:523-527.
42. IIS mediate activation of transcription in the Drosophila embryo. Cell 87:1271-1284.
43. II145 functions as a core promoter selectivity factor, not a general coactivator. Cell 90:615-624.
44. Singer, V. L., C. R. Wobbe, and K. Struhl. 1990. A wide variety of DNA sequences can functionally replace a yeast TATA element for transcriptional activation. Genes Dev. 4:636-645.
45. Stargell, L. A., and K. Struhl. 1995. The TBP-TFIIA interaction in the response to acidic activators in vivo. Science 269:75-78.
46. Stargell, L. A., and K. Struhl. 1996. A new class of activation-defective TATA-binding protein mutants: evidence for two steps of transcriptional activation in vivo. Mol. Cell. Biol. 16:4456-4464.
47. Stringer, K. F., C. J. Ingles, and J. Greenblatt. 1990. Direct and selective binding of an acidic transcriptional activation domain to the TATA-box factor TFIID. Nature 345:783-786.
48. Struhl, K. 1996. Chromatin structure and RNA polymerase II connection: implications for transcription. Cell 84:179-182.
49. Struhl, K., and Z. Moqtaderi. 1998. The TAFs in the HAT. Cell 94:1-4.
50. 1 at the nonpermissive temperature. Mol. Cell. Biol. 17:3284-3294.
51. Tan, S., Y. Hunziker, D. F. Sargent, and T. J. Richmond. 1996. Crystal structure of a yeast TFIIA/TBP/DNA complex. Nature 381:127-134.
52. Verrijzer, C. P., J.-L. Chen, K. Yokomori, and R. Tjian. 1995. Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II. Cell 81:1115-1125.
53. Verrijzer, C. P., and R. Tijan. 1996. TAFs mediate transcriptional activation and promoter selectivity. Trends Biochem. Sci. 21:338-342.
54. IIS. Nature 382:185-188.
55. II145 required for transcription of GI/S cyclin genes and regulated by the cellular growth state. Cell 90:607-614.
56. II250. Science 263:811-814.
57. II70 reveal conserved interactions with other subunits of TFIID. EMBO J. 12: 5303-5309.
58. Workman, J. L., I. C. A. Taylor, and R. E. Kingston. 1991. Activation domains of stably bound GAL4 derivatives alleviate repression of promoters by nucleosomes. Cell 64:533-544.
59. II-independent activation mediated by human TBP in the presence of the positive cofactor PC4. EMBO J. 17:4478-4490.
60. Xiao, H., J. D. Friesen, and J. T. Lis. 1995. Recruiting TATA-binding protein to a promoter: transcriptional activation without an upstream activator. Mol. Cell. Biol. 15:5757-5761.
61. Xiao, H., A. Pearson, B. Coulombe, R. Truant, S. Zhang, J. L. Regier, S. J. Triezenberg, D. Reinberg, O. Flores, C. J. Ingles, and J. Greenblatt. 1994. Binding of basal transcription factor TFIIH to the acidic activation domains of VP16 and p53. Mol. Cell. Biol. 14:7013-7024.
62. Zhou, Q., P. M. Lieberman, T. G. Boyer, and A. J. Berk. 1992. Holo TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter. Genes Dev. 6:1964-1974.