RNA - Cytoskeletal associations

FASEB Journal

Volumn 13, Issue 3, 1999, Pages 455-466

  Jansen, Ralf Peter ^a  

^a UNIVERSITY OF HEIDELBERG   (Germany)

Author keywords

Microfilaments; Microtubules; RNA binding proteins; RNA localization; Translation

Indexed keywords

MESSENGER RNA;

CYTOSKELETON; HUMAN; MICROFILAMENT; MICROTUBULE ASSEMBLY; NERVE CELL; OLIGODENDROGLIA; OOCYTE; PRIORITY JOURNAL; PROTEIN RNA BINDING; REVIEW; RNA TRANSLATION;

AMPHIBIA; MAMMALIA;

EID: 0032967476     PISSN: 08926638     EISSN: None     Source Type: Journal    
DOI: 10.1096/fasebj.13.3.455     Document Type: Review

References (107)

1. Bershadsky, A. D., and Vasiliev, J. M. (1988) Cytoskeleton, 1st Ed, Plenum Press, New York
2. St. Johnston, D. (1995) The intracellular localization of messenger RNAs. Cell 81, 161-170
3. Bogucka Glotzer, J., and Ephrussi, A. (1996) mRNA localization and the cytoskeleton. Semin. Cell Dev. Biol. 7, 357-365
4. Hesketh, J. E. (1996) Sorting of messenger RNAs in the cytoplasm: mRNA localization and the cytoskeleton. Exp. Cell Res. 225, 219-236
5. Hovland, R., Hesketh, J. E., and Pryme, I. F. (1996) The compartmentalization of protein synthesis: importance of cytoskeleton and role in mRNA targetting. Int. J. Biochem. Cell Biol. 28, 1089-1105
6. Hesketh, J., Campbell, G., Piechaczyk, M., and Blanchard, J.-M. (1994) Targetting of c-myc and β-globin coding sequences to the cytoskeletal-bound polysomes by c-myc 3′ untranslated region. Biochem. J. 298, 143-148
7. Taneja, K. L., Lifshitz, L.M., Fay, F. S., and Singer, R. H. (1992) Poly(A) RNA codistribution with microfilaments: evaluation by in situ hybridization and quantitative digital imaging microscopy. J. Cell Biol. 119, 1245-1260
8. Heuser, J. E., and Kirschner, M. W. (1980) Filament organization revealed in platinum replicas of freeze-dried cytoskeletons. J. Cell Biol. 86, 212-234
9. Brown, S., Levinson, W., and Spudich J. A. (1976) Cytoskeletal elements of chick fibroblasts revealed by detergent extraction. J. Supramol. Struct. 5, 119-130
10. Lenk, R., Ransom, L., Kaufmann, Y., and Penman, S. (1977) A cytoskeletal structure with associated polyribosomes obtained from HeLa cells. Cell 10, 67-78
11. Lenk, R., and Penman, S. (1979) The cytoskeletal framework and poliovirus metabolism. Cell 16, 289-301
12. van Venrooij, W. J., Sillekens, P. T. G., van Eekelen, C. A. G., and Reinders, R. J. (1981) On the association of mRNA with the cytoskeleton in uninfected and adenovirus-infected human KB cells. Exp. Cell Res. 135, 79-91
13. Howe, J. G., and Hershey J. W. B. (1984) Translational initiation factor and ribosome association with the cytoskeletal framework fraction from HeLa cells. Cell 37, 85-93
14. Yang, F., Demma, M., Warren, V., Dharmawardhane, S., and Condeelis, J. (1990) Identification of an actin-binding protein from Dictyostelium as elongation factor 1α. Nature (London) 347, 494-496
15. Biegel, D., and Pachter, J. S. (1992) mRNA association with the cytoskeletal framework likely represents a physiological binding event. J. Cell. Biochem. 48, 98-106
16. Hovland, R., Campbell, G., Pryme, I., and Hesketh, J. (1995) The mRNAs for cyclin A, c-myc and ribosomal proteins 1.4 and S6 are associated with cytoskeletal-bound polysomes in HepG2 cells. Biochem. J. 310, 193-196
17. Vedeler, A., Pryme, I. F., and Hesketh, J. E. (1991) The characterization of free, cytoskeletal and membrane-bound polysomes in Krebs II ascites and 3T3 cells. Mol. Cell. Biochem. 100, 183-193
18. Zambetti, G., Schmidt, W., Stein, G., and Stein J (1985) Subcellular localization of histone messenger RNAs on cytoskeleton-associated free polysomes in HeLa S3 cells. J. Cell Physiol. 125, 345-353
19. Ornelles, D. A., Fey, E. G., and Penman, S. (1986) Cytochalasin releases mRNA from the cytoskeletal framework and inhibits protein synthesis. Mol. Cell. Biol. 6, 1650-1662
20. Hesketh, J. E., Home, Z., and Campbell, G. P. (1991) Immunohistochemical evidence for an association of ribosomes with microfilaments in 3T3 fibroblasts. Cell Biol. Int. Rep. 15, 141-150
21. Heuijerjans, J. H., Pieper, F. R., Ramaekers, F. C., Timmermans, L. J., Kuijpers, H., Bloemendal, H., van Venrooij, W. J. (1989) Association of mRNA and elF-2 alpha with the cytoskeleton in cells lacking vimentin. Exp. Cell Res. 181, 317-330
22. Shestakova, E. A., Motuz, L. P., and Gavrilova, L. P. (1993) Co-localization of components of the protein-synthesizing machinery with the cytoskeleton in G0-arrested cells. Cell Biol. Int. 17, 417-424
23. Bassell, G. J., Singer, R. F., and Kosik, K. S. (1994) Association of poly(A) mRNA with microtubules in cultured neurons. Neuron 12, 571-082
24. Ainger, K., Avossa, D., Morgan, F., Hill, S. J., Barry, C., Barbarese, E., and Carson, J. H. (1993) Transport and localization of exogenous myelin basic protein mRNA microinjected into oligodendrocytes. J. Cell Biol. 123: 431-441
25. Bassell, G. J., Powers, G. M., Taneja, K. L., and Singer, R. H. (1994) Single mRNAs visualized by ultrastructural in situ hybridization are principally localized at actin filament intersections in fibroblasts. J. Cell Biol. 126, 863-876
26. 1 50,000 cap-binding protein with the cytoskeleton in baby hamster kidney cells. Proc. Natl. Acad. Sci. USA 79: 2927-2931
27. Erickson, P. A., Feinstein, S. C., Lewis, G. P., and Ficher, S. K. (1992) Glial fibrillary acidic protein and its mRNA: ultrastructural detection and determination of changes after CNS injury. J. Struct. Biol. 108, 148-161
28. Sundell, C. L., and Singer, R. H. (1991) Requirement of microfilaments in sorting of actin messenger RNA. Science 252, 1270-1277
29. Broadus, J., and Doe, C. D. (1997) Extrinsic cues, intrinsic cues and microfilaments regulate asymmetric protein localization in Drosophila neuroblasts. Curr. Biol. 7, 827-835
30. Han, J. W., Park, J. H., Kim, M., and Lee, J. (1997) mRNAs for microtubule proteins are specifically colocalized during the sequential formation of basal body, flagella, and cytoskeletal microtubules in the differentiation of Naegleria gruberi. J. Cell Biol. 137, 871-879
31. + RNA during polarization of the Fucus zygote is dependent upon microfilaments. Dev. Biol. 171, 258-261
32. Long, R. M., Singer, R. H., Meng, X., Gonzalez, I., Nasmyth, K., and Jansen, R.-P. (1997) Mating type switching in yeast controlled by assymetric localization of ASH 1 mRNA. Science 277, 383-387
33. Takizawa, P. A., Sil, A., Swedlow, J. R., Herskowitz, I., and Vale, R. D. (1997) Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast. Nature (London) 389, 90-93
34. Glotzer, J. B., Saffrich, R., Glotzer, M., and Ephrussi, A. (1997) Cytoplasmic flows localize injected oskar RNA in Drosophila oocytes. Curr. Biol. 7, 326-337
35. Manseau, L., Calley, J., and Phan, H. (1996) Profilin is required for posterior patterning of the Drosophila oocyte. Development 122, 2109-2116
36. Erdelyi, M., Michon, A.-M., Guichet, A., Bogucka Glotzer, J., and Ephrussi, A. (1995) Requirement for Drosophila cytoplasmic tropomyosin in oskar mRNA localization. Nature (London) 377, 524-527
37. Tetzlaff, M. T., Jaeckle, H., and Pankratz, M. J. (1995) Lack of Drosophila cytoskeletal tropomyosin affects head morphogenesis and the accumulation of oskar mRNA required for germ cell formation. EMBO J. 15 1247-1254
38. Kim-Ha, J., Smith, J. L., and MacDonald, P. M. (1991) Oskar mRNA is localized to the posterior pole of the Drosophila oocyte. Cell 66, 23-35
39. Ephrussi, A., Dickinson, L. K., and Lehmann, R. (1991) Oskar organizes the germ plasm and directs localization of the posterior determinant nanos. Cell 66, 37-50
40. Yisraeli, J. K., Sokol, S., and Mellon, D. A. (1990) A two-step model for the localization of maternal mRNA in Xenopus oocytes: involvement of microtubules and microfilaments in the translocation and anchoring of Vg1 mRNA. Development 108, 289-298
41. Montana, G., Bonura, A., Romancino, D. P., Shisa, E., and Di Carlo, M. (1997) A 54-kDa protein specifically associates the 3′ untranslated region of three maternal mRNAs with the cytoskeleton of the animal part of the Paracentrotus lividus egg. Eur. J. Biochem. 247, 183-189
42. Romancino, D. P., Montana, G., and Di Carlo, M. (1998) Involvement of the cytoskeleton in localization of Paracentrotus lividus maternal BEP mRNAs and proteins. Exp. Cell Res. 238, 101-109
43. Zhou, V., and King, M. L. (1996) RNA transport to the vegetal cortex of Xenopus oocytes. Dev. Biol. 179, 173-183
44. Warn, R. M., Gutzeit, H. O., Smith, L., and Warn, A. (1985) F-actin rings are associated with the ring canals of the Drosophila egg chamber. Exp. Cell Res. 157, 255-363
45. Rodionov, V. I., Hope, A. J., Svitkina, T. M., and Borisy G. G. (1998) Functional coordination of microtubule-based and actin-based motility in melanophores. Curr. Biol. 8, 165-168
46. Rogers, S. L., and Gelfand, V. I. (1998) Myosin cooperates with microtubule motors during organelle transport in melanophores. Curr. Biol. 8, 161-164
47. Bonneau, A. M., Darveau, A., and Sonenberg, N. (1985) Effect of viral infection on host protein synthesis and mRNA association with the cytoplasmic cytoskeletal structure. J. Cell Biol. 100, 1209-1218
48. King, M. L. (1996) Molecular basis for cytoplasmic localization. Dev. Genet. 19, 183-189
49. Micklem, D. R. (1995) mRNA localization during development. Dev. Biol. 172, 377-395
50. Gavis, E. R., Curtis, D., and Lehmann, R. (1996) Identification of cis-acting sequences that control nanos mRNA localization. Dev. Biol. 176, 36-50
51. MacDonald, P. M. (1990) Bicoid mRNA localization signal : phylogenetic conservation of function and RNA secondary structure. Development 110, 161-171
52. Ross, A. F., Oleynikov, Y., Kislauskis, E. H., Taneja, K. L., and Singer, R. H. (1997) Characterization of a β-actin mRNA zipcode-binding protein. Mol. Cell. Biol. 17, 2158-2165
53. Lipshitz, H. D. (1995) Localized RNAs. Molecular Biology Intelligence Unit, 1st Ed. pp. 1-322, R. G. Landes Co., Austin, Texas
54. Luby-Phelps, K. (1994) Physical properties of cytoplasm. Curr. Opin. Cell Biol. 6, 3-9
55. Hirokawa, N. (1998) Kinesin and dynein superfamily proteins and the mechanism of organelles transport. Science 279, 519-526
56. Clark, I., Giniger, E., Ruohola-Baker, H., Jan, L. Y., and Jan, Y. N. (1994) Transient posterior localization of a kinesin fusion protein reflects anteroposterior polarity of the Drosophila oocyte. Curr. Biol. 4: 289-300
57. Lane M. E., and Kalderon, D. (1994) RNA localization along the anteroposterior axis of the Drosaphila oocyte requires PKA-mediated signal transduction to direct normal microtubule organization. Genes & Dev. 8, 2986-2995
58. Carson, J. H., Worboys, K., Ainger, K., and Barbarese, E. (1997) Translocation of myelin basic protein mRNA in oligodendrocytes requires microtubules and kinesin. Cell Motil. Cytoskeleton 38, 318-328
59. Vallee, R. B., and Bloom, G. S. (1991) Mechanisms of fast and slow axonal transport. Annu. Rev. Neurosci. 14, 59-92
60. Knowles, R. B., Sabry, J. H., Martone, M., Deerinck, T. J., Ellisman, M. H., Bassell, G. J., and Kosik, K. S. (1996) Translocation of RNA granules in living neurons. J. Neurosci. 16, 7812-7820
61. Haarer, B. K., Petzold, A., Lillie, S. H., and Brown, S. S. (1994) Identification of MYO4, a second class V myosin gene in yeast. J. Cell Sci. 107, 1055-1064
62. Mooseker, M. S., and Cheney, R. E. (1995) Unconventional myosins. Annu. Rev. Cell Dev. Biol. 11, 633-675
63. Wang, S. Z., and Adler, R. (1995) Chromokinesin: a DNA-binding, kinesin-like nuclear protein. J. Cell Biol. 128, 761-768
64. Oberman, F., and Yisraeli, J. K. (1995) Two protocols for nonradioactive in situ hybridization to Xenopus oocytes. Trends Genet. 11, 83-84
65. Schroeder, K. E., and Yost, H. J. (1996) Xenopus poly (A) binding protein maternal RNA is localized during oogenesis and associated with large complexes in blastula. Dev. Genet. 19, 268-276
66. Ferrandon, D., Elphick, L., Nüsslein-Volhard, C., and St. Johnson, D. (1994) Staufen protein associates with the 3′ UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner. Cell 79, 1221-1232
67. Wang, S., and Hazelrigg, T. (1994) Implications for bcd mRNA localization from spatial distribution of exit protein in Drosophila oogenesis. Nature (London) 369, 400-403
68. Barbarese, E., Koppel, D. E., Deutscher, M. P., Smith, C. L., Ainger, K., Morgan, F., and Carson, J. H. (1995) Protein translation components are colocalized in granules in oligodendrocytes. J. Cell Sci. 108, 2781-2790
69. Bassell, G. J., Zhang, H., Byrd, A. L., Femino, A. M., Singer, R. H., Taneja, K. L., Lifshitz, L. M., Herman, I. M., and Kosik, K. S. (1998) Sorting of beta-actin mRNA and protein to neurites and growth cones in culture. J. Neurosci. 18, 251-265
70. Hoek, K. S., Kidd, G. J., Carson, J. H., and Smith, R. (1998) hnRNP A2 selectively binds the cytoplasmic transport sequence of myelin basic protein mRNA. Biochemistry 37, 7021-7029
71. Weighardt, F., Biamonti, G., and Riva, S. (1996) The roles of heterogeneous nuclear ribonucleoproteins (hnRNP) in RNA metabolism. Bioessays 18, 747-756
72. Antic, D., and Keene, J. D. (1998) Messenger ribonucleoprotein complexes containing human ELAV proteins: interactions with cytoskeleton and translational apparatus. J. Cell Sci. 111, 185-197
73. St. Johnston, D., Beuchle, D., and Nüsslein-Volhard, C. (1991) Staufen, a gene required to localize maternal RNAs in the Drosophila egg. Cell 66, 51-63
74. Havin, L., Git, A., Elisha, Z., Oberman, F., Yaniv, K., Pressman Schwartz, S., Standart, N., and Yisraeli, J. K. (1998) RNA-binding protein conserved in both microtubule- and microfilament-based RNA localization. Genes & Dev. 12, 1593-1598
75. Deshler, J. O., Highett, M. I., Abramson, T., and Schnapp, B. J. (1998) A highly conserved RNA-binding protein for cytoplasmic mRNA localization in vertebrates. Curr. Biol. 8, 489-496
76. Han, J. R., Yiu, G. K., and Hecht, N. B. (1995) Testis/brain RNA-binding protein attaches translationally repressed and transported mRNAs to microtubules. Proc. Natl. Acad. Sci. USA 92, 9550-9554
77. Schumacher, J. M., Artzt, K., and Braun, R. E. (1998) Spermatid perinuclear ribonucleic acid-binding protein binds microtubules in vitro and associates with abnormal manchettes in vivo in mice. Biol. Reprod. 59, 69-76
78. Schumacher, J. M., Lee, K., Edelhoff, S., and Braun, R. E. (1995) Spnr, a murine RNA-binding protein that is localized to cytoplasmic microtubules. J. Cell Biol. 129, 1023-1032
79. Bycroft, M., Grünert, S., Murzin, A. G., Proctor, M., and St. Johnston, D. (1995) NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5. EMBO J. 14, 3563-3571
80. Pokrywka, N. J., and Stephenson, E. C. (1991) Microtubules mediate the localization of bicoid RNA during Drosophila oogenesis. Development 113, 55-66
81. Theurkauf, W. E., Smiley, S., Wong, M. L., and Alberts, B. M. (1992) Reorganization of the cytoskeleton during Drosophila oogenesis: implications for axis specification and intercellular transport. Development 115, 923-936
82. Pokrywka, N. J., and Stephenson, E. C. (1995) Microtubules are a general component of mRNA localization systems in Drosophila oocytes. Dev. Biol. 167, 363-370
83. Hirata, J., Nakagoshi, H., Nabeshima, Y.-I., and Matsuzaki, F. (1995) Asymmetric segregation of the homeodomain protein Prospero during Drosophila development. Nature (London) 377, 627-630
84. Knoblich, J. A., Jan, L. Y., and Jan, Y. N. (1995) Asymmetric segregation of Numb and Prospero during cell division. Nature (London) 377, 624-627
85. Li, P., Yang, X., Wasser, M., Cai, Y., and Chia, W. (1997) Inscuteable and Staufen mediate asymmetric localization and segregation of prospero RNA during Drosophila neuroblast cell divisions. Cell 90, 437-447
86. Broadus, J., Fuerstenberg, S., and Doe, C. Q. (1998) Staufen-dependent localization of prospero mRNA contributes to neuroblast daughter cell fate. Nature (London) 391, 792-795
87. Schuldt, A. J., Adams, J. H. J., Davidson, C. M., Micklem, D. R., Haseloff, J., St. Johnston, D., and Brand, A. H. (1998) Miranda mediates asymmetric protein and RNA localization in the developing nervous system. Genes & Dev. 12, 1847-1857
88. Shen, C.-P., Knoblich, J. A., Chan Y.-M., Jiang, M.-M., Jan, L. Y., and Jan, Y. N. (1998) Miranda as a multidomain adapter linking localized Inscuteable and basally localized Staufen and Prospero during asymmetric cell division in Drosophila. Genes & Dev. 12, 1837-1846
89. Kraut, R., Chia, W., Jan, L. Y., Jan, Y. N., and Knoblich, J. A. (1996) Role of inscuteable in orienting asymmetric cell divisions in Drosophila. Nature (London) 383, 50-55
90. Elisha, Z., Havin, L., Ringel, I., and Yisraeli, J. K. (1995) Vg1 RNA binding protein mediates the association of Vg1 RNA with microtubules in Xenopus oocytes. EMBO J. 14, 5109-5114
91. Nagai, K. (1996) RNA-protein complexes. Curr. Opin. Struct. Biol. 6, 53-61
92. Deshler, J. O., Highett, M. I., and Schnapp, B. J. (1997) Localization of Xenopus Vg1 mRNA by Vera protein and the endoplasmic reticulum. Science 276, 1128-1131
93. Kislauskis, E. H., Li, Z., Singer, R. H., and Taneja, K. L. (1993) Isoform-specific 3′-untranslated sequences sort a-cardiac and β-cytoplasmic actin messenger RNAs to different cytoplasmic compartments. J. Cell Biol. 123, 165-172
94. Micklem, D. R. (1998) Trans-acting factors required for the posterior localization of oskar mRNA. Ph.D. Thesis, Cambridge, U.K.
95. DeFranco, C., Chicurel, M. E., and Potter, H. (1998) A general RNA-binding protein complex that includes the cytoskeleton-associated protein MAP1A. Mol. Biol. Cell 9, 1695-1708
96. Wiche, G., Briones, E., Koszka, C., Artlieb, U., and Krepler, R. (1984) Widespread occurrence of polypeptides related to neurotubule-associated proteins (MAP-1 and MAP-2) in non-neuronal cells and tissues. EMBO J. 3, 991-998
97. Zhou, B., Boudreau, N., Coulber, C., Hammerback, J., and Rabinovitch, M. (1997) Microtubule-associated protein 1 light chain 3 is a fibronectin mRNA-binding protein linked to mRNA translation in lamb vascular smooth muscle cells. J. Clin. Invest. 100, 3070-3082
98. Kraemer, D., and Blobel, G. (1997) mRNA binding protein mrnp41 localizes to both nucleus and cytoplasm. Proc. Natl. Acad. Sci. USA 94, 9119-9124
99. Visa, N., Alzhanova-Ericsson, A. T., Sun, X., Kiseleva, E., Bjorkroth, B., Wurtz, T., and Daneholt, B. (1996) A pre-mRNA-binding protein accompanies the RNA from the gene through the nuclear pores and into polysomes. Cell 84, 253-264
100. Moon, R. T., Nicosia, R. F., Olsen, C., Hille, M. B., and Jeffery, W. R. (1983) The cytoskeletal framework of sea urchin eggs and embryos: developmental changes in the association of messenger RNA. Dev. Biol. 95, 447-458
101. Negrutskii, B. S., and Deutscher, M. P. (1991) Channeling of aminoacyl-tRNA for protein synthesis in vivo. Proc. Natl. Acad. Sci. USA 88 4991-4995
102. Sivaram, P., and Deutscher, M. P. (1990) Existence of two forms of rat liver arginyl-tRNA synthetase suggests channeling of aminoacyl-tRNA for protein synthesis. Proc. Natl. Acad. Sci. USA 87, 3665-3669
103. Stapulionis, R., Kolli, S., and Deutscher, M. P. (1998) Efficient mammalian protein synthesis requires an intact F-actin system. J. Biol. Chem. 272, 24980-24986
104. Negrutskii, B. S., Stapulionis, R., and Deutscher, M. P. (1994) Supramolecular organization of the mammalian translation system. Proc. Natl. Acad. Sci. USA 91, 964-968
105. Shiina, N., Gotoh, Y., Kubomura, N., Iwamatsu, A., and Nishida, E. (1994) Microtubule severing by elongation factor 1 alpha. Science 266, 282-285
106. Liu, G., Tang, J., Edmonds, B. T., Murray, J., Levin, S., and Condeelis J. (1996) F-actin sequestrs elongation factor 1α from interaction with aminoacyl-tRNA in a pH-dependent reaction. J. Cell Biol. 135, 953-963
107. Kimura, T., Hashimoto, I., Nishikawa, M., and Fujisawa, J. I. (1996) A role for Rev in the association of HIV-1 gag mRNA with cytoskeletal β-actin and viral protein expression. Biochimie 78, 1075-1080