메뉴 건너뛰기




Volumn 9, Issue 1, 1996, Pages 125-133

An improved method of partially digesting plant megabase DNA suitable for YAC cloning: Application to the construction of a 5.5 genome equivalent YAC library of tomato

Author keywords

[No Author keywords available]

Indexed keywords

CLADOSPORIUM; CLADOSPORIUM FULVUM; LYCOPERSICON ESCULENTUM;

EID: 0030064555     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1996.09010125.x     Document Type: Article
Times cited : (41)

References (46)
  • 2
    • 0025368589 scopus 로고
    • Construction and characterization of a yeast artificial chromosome library containing seven haploid human genome equivalents
    • Albertsen, H.M., Abderrahin, H., Cann, H.M., Dausset, J., Le Paslier, D. and Cohen, D. (1990) Construction and characterization of a yeast artificial chromosome library containing seven haploid human genome equivalents. Proc. Natl Acad. Sci. USA, 87, 4256-4260.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 4256-4260
    • Albertsen, H.M.1    Abderrahin, H.2    Cann, H.M.3    Dausset, J.4    Le Paslier, D.5    Cohen, D.6
  • 3
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plant species
    • Arumuganathan, K. and Earle, E.D. (1991) Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9, 208-218.
    • (1991) Plant Mol. Biol. Rep. , vol.9 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.D.2
  • 4
    • 0027954746 scopus 로고
    • RFLP linkage analysis of the Cf-4 and Cf-9 genes for resistance to Cladosporium fulvum in tomato
    • Balint-Kurti, P.J., Dixon, M.S., Jones, D.A., Norcott, K.A. and Jones, J.D.G. (1994) RFLP linkage analysis of the Cf-4 and Cf-9 genes for resistance to Cladosporium fulvum in tomato. Theor. Appl. Genet. 88, 691-700.
    • (1994) Theor. Appl. Genet. , vol.88 , pp. 691-700
    • Balint-Kurti, P.J.1    Dixon, M.S.2    Jones, D.A.3    Norcott, K.A.4    Jones, J.D.G.5
  • 5
    • 0026072844 scopus 로고
    • Theoretical analysis of library screening using a N-dimensional pooling strategy
    • Barillot, E., Lacroix, B. and Cohen, D. (1991) Theoretical analysis of library screening using a N-dimensional pooling strategy. Nucl. Acids Res. 19, 6241-6247.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 6241-6247
    • Barillot, E.1    Lacroix, B.2    Cohen, D.3
  • 7
    • 0023360013 scopus 로고
    • Transformation of yeast spheroplasts without cell fusion
    • Burgers, W.J. and Percival, K.J. (1987) Transformation of yeast spheroplasts without cell fusion. Anal. Biochem. 163, 391-397.
    • (1987) Anal. Biochem. , vol.163 , pp. 391-397
    • Burgers, W.J.1    Percival, K.J.2
  • 8
    • 0023349389 scopus 로고
    • Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors
    • Burke, D.T., Carle, G.F. and Olson, M.V. (1988) Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science, 236, 806-812.
    • (1988) Science , vol.236 , pp. 806-812
    • Burke, D.T.1    Carle, G.F.2    Olson, M.V.3
  • 9
    • 0025431119 scopus 로고
    • The isolation of high molecular-weight DNA from wheat, barley and rye for the analysis by pulsed field get electrophoresis
    • Cheung, W.Y. and Gale, M.D. (1990) The isolation of high molecular-weight DNA from wheat, barley and rye for the analysis by pulsed field get electrophoresis. Plant Mol. Biol. 14, 881-888.
    • (1990) Plant Mol. Biol. , vol.14 , pp. 881-888
    • Cheung, W.Y.1    Gale, M.D.2
  • 10
    • 6844222016 scopus 로고
    • Preparation of high molecular-weight plant DNA and analysis by pulsed field gel electrophoresis
    • van Daelen, R.A.J. and Zabel, P. (1994) Preparation of high molecular-weight plant DNA and analysis by pulsed field gel electrophoresis. Plant Mol. Biol. Manual, H3, 1-21.
    • (1994) Plant Mol. Biol. Manual , vol.H3 , pp. 1-21
    • Van Daelen, R.A.J.1    Zabel, P.2
  • 11
    • 0011087316 scopus 로고
    • Preparation of megabase-sized tomato DNA and separation of large restriction fragments by field inversion gel electrophoresis (FIGE)
    • van Daelen, R.A.J., Jonkers, J.J. and Zabel, P. (1989) Preparation of megabase-sized tomato DNA and separation of large restriction fragments by field inversion gel electrophoresis (FIGE). Plant Mol. Biol. 12, 341-352.
    • (1989) Plant Mol. Biol. , vol.12 , pp. 341-352
    • Van Daelen, R.A.J.1    Jonkers, J.J.2    Zabel, P.3
  • 13
    • 0000157704 scopus 로고
    • PFGE YAC analysis of the Arabidopsis genome
    • Ecker, J.R. (1990) PFGE YAC analysis of the Arabidopsis genome. Methods, 1, 186-194.
    • (1990) Methods , vol.1 , pp. 186-194
    • Ecker, J.R.1
  • 15
    • 0020793569 scopus 로고
    • A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity
    • Feinberg, A.P. and Vogelstein, B. (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
    • (1983) Anal. Biochem. , vol.132 , pp. 6-13
    • Feinberg, A.P.1    Vogelstein, B.2
  • 16
    • 51249174952 scopus 로고
    • Analysis of tomato DNA by pulsed field gel electrophoresis
    • Ganal, M.W. and Tanksley, S.D. (1989) Analysis of tomato DNA by pulsed field gel electrophoresis. Plant Mol. Biol. Rep. 7, 17-27.
    • (1989) Plant Mol. Biol. Rep. , vol.7 , pp. 17-27
    • Ganal, M.W.1    Tanksley, S.D.2
  • 17
    • 0025016822 scopus 로고
    • Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction
    • Green, E.D. and Olson, M.V. (1990) Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc. Natl Acad. Sci. USA, 87, 1213-1217.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 1213-1217
    • Green, E.D.1    Olson, M.V.2
  • 18
    • 0025765676 scopus 로고
    • Construction and characterization of a yeast artificial chromosome library of Arabidopsis which is suitable for chromosome walking
    • Grill, E. and Somerville, C. (1991) Construction and characterization of a yeast artificial chromosome library of Arabidopsis which is suitable for chromosome walking. Mol. Gen. Genet. 226, 484-490.
    • (1991) Mol. Gen. Genet. , vol.226 , pp. 484-490
    • Grill, E.1    Somerville, C.2
  • 20
    • 0024282985 scopus 로고
    • Development of large DNA methods for plants: Molecular cloning of large segments of Arabidopsis and carrot DNA into yeast
    • Guzman, P. and Ecker, J.R. (1988) Development of large DNA methods for plants: molecular cloning of large segments of Arabidopsis and carrot DNA into yeast. Nucl. Acids Res. 16, 11 091-11 105.
    • (1988) Nucl. Acids Res. , vol.16 , pp. 11091-11105
    • Guzman, P.1    Ecker, J.R.2
  • 21
    • 0025353556 scopus 로고
    • Methylase-limited partial Notl cleavage for physical mapping of genomic DNA
    • Hanish, J. and McClelland, M. (1990) Methylase-limited partial Notl cleavage for physical mapping of genomic DNA. Nucl. Acids Res. 18, 3287-3291.
    • (1990) Nucl. Acids Res. , vol.18 , pp. 3287-3291
    • Hanish, J.1    McClelland, M.2
  • 22
    • 0025786213 scopus 로고
    • Application of methylase-limited partial Notl cleavage for a long range restriction map of the human ABL locus
    • Hanish, J., Rebelsky, M., McClellend, M. and Westbrook, C. (1991) Application of methylase-limited partial Notl cleavage for a long range restriction map of the human ABL locus. Genomics, 10, 681-685.
    • (1991) Genomics , vol.10 , pp. 681-685
    • Hanish, J.1    Rebelsky, M.2    McClellend, M.3    Westbrook, C.4
  • 23
    • 0026952957 scopus 로고
    • The root-knot nematode resistance gene (Mi) in tomato: Construction of a molecular linkage map and identification of dominant cDNA markers in resistance genotypes
    • Ho, J.Y., Weide, R., Ma, H.M., van Wordragen, M.F.. Lambert, K.N., Koornneef, M., Zabel, P. and Williamson, V.M. (1992) The root-knot nematode resistance gene (Mi) in tomato: construction of a molecular linkage map and identification of dominant cDNA markers in resistance genotypes. Plant J. 2, 971-982.
    • (1992) Plant J. , vol.2 , pp. 971-982
    • Ho, J.Y.1    Weide, R.2    Ma, H.M.3    Van Wordragen, M.F.4    Lambert, K.N.5    Koornneef, M.6    Zabel, P.7    Williamson, V.M.8
  • 24
    • 0023481280 scopus 로고
    • A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli
    • Huffman, C.S. and Winston, F. (1987) A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene, 57, 267-272.
    • (1987) Gene , vol.57 , pp. 267-272
    • Huffman, C.S.1    Winston, F.2
  • 25
    • 0024791184 scopus 로고
    • Control of partial digestion combining the enzymes Dam methylase and Mbol
    • Hoheisel, J.D., Nizetic, D. and Lehrach, H. (1989) Control of partial digestion combining the enzymes Dam methylase and Mbol. Nucl. Acids Res. 17, 9571-9582.
    • (1989) Nucl. Acids Res. , vol.17 , pp. 9571-9582
    • Hoheisel, J.D.1    Nizetic, D.2    Lehrach, H.3
  • 26
    • 0025163052 scopus 로고
    • Second generation approach to the construction of yeast artificial-chromosome libraries
    • Imai, T. and Olson, M.V. (1990) Second generation approach to the construction of yeast artificial-chromosome libraries. Genomics, 8, 297-303.
    • (1990) Genomics , vol.8 , pp. 297-303
    • Imai, T.1    Olson, M.V.2
  • 27
    • 0028152968 scopus 로고
    • Isolation of the tomato Cf9 gene for resistance to Cladosporium fulvum by transposon tagging
    • Jones, D.A., Thomas, C.M., Hammond-Kosack, K.E., Balint-Kurti, P.J. and Jones, J.D.G. (1994) Isolation of the tomato Cf9 gene for resistance to Cladosporium fulvum by transposon tagging. Science, 266, 789-793.
    • (1994) Science , vol.266 , pp. 789-793
    • Jones, D.A.1    Thomas, C.M.2    Hammond-Kosack, K.E.3    Balint-Kurti, P.J.4    Jones, J.D.G.5
  • 28
    • 0027166214 scopus 로고
    • Construction of a barley (Hordeum vulgare L.) YAC library and isolation of a Hor1-specific clone
    • Kleine, M., Michalek, W., Graner, A., Herrmann, R.G. and Jung, C. (1993) Construction of a barley (Hordeum vulgare L.) YAC library and isolation of a Hor1-specific clone. Mol. Gen. Genet. 240, 265-272.
    • (1993) Mol. Gen. Genet. , vol.240 , pp. 265-272
    • Kleine, M.1    Michalek, W.2    Graner, A.3    Herrmann, R.G.4    Jung, C.5
  • 30
    • 0025897085 scopus 로고
    • Yeast artificial chromosome libraries containing large inserts from mouse and human DNA
    • Larin, Z., Monaco, A.P. and Lehrach, H. (1991) Yeast artificial chromosome libraries containing large inserts from mouse and human DNA. Proc. Natl Acad. Sci. USA, 88, 4123-4127.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 4123-4127
    • Larin, Z.1    Monaco, A.P.2    Lehrach, H.3
  • 31
    • 0026553755 scopus 로고
    • Construction and characterization of a yeast artificial chromosome library for Xpter-Xq27.3: A systematic determination of cocloning rate and X-chromosome representation
    • Lee, J.T., Murgia, A., Sosnoski, D.M., Olivos. I.M. and Nussbaum, R.L. (1992) Construction and characterization of a yeast artificial chromosome library for Xpter-Xq27.3: a systematic determination of cocloning rate and X-chromosome representation. Genomics, 12, 526-533.
    • (1992) Genomics , vol.12 , pp. 526-533
    • Lee, J.T.1    Murgia, A.2    Sosnoski, D.M.3    Olivos, I.M.4    Nussbaum, R.L.5
  • 32
    • 0027507643 scopus 로고
    • Construction of a bovine genomic library of large yeast artificial chromosome clones
    • Libert, F., Lefort, A., Okimoto, R., Womack, J. and Georges, M. (1993) Construction of a bovine genomic library of large yeast artificial chromosome clones. Genomics, 18, 270-276.
    • (1993) Genomics , vol.18 , pp. 270-276
    • Libert, F.1    Lefort, A.2    Okimoto, R.3    Womack, J.4    Georges, M.5
  • 33
    • 0026693412 scopus 로고
    • Construction of a yeast artificial chromosome library of tomato and identification of cloned segments linked to two disease resistance loci
    • Martin, G.B., Ganal, M.W. and Tanksley, S.D. (1992) Construction of a yeast artificial chromosome library of tomato and identification of cloned segments linked to two disease resistance loci. Mol Gen. Genet. 223, 25-32.
    • (1992) Mol Gen. Genet. , vol.223 , pp. 25-32
    • Martin, G.B.1    Ganal, M.W.2    Tanksley, S.D.3
  • 35
    • 0344007178 scopus 로고
    • 2 between Lycopersicon esculentum cv Allround and L. pennellii for mapping studies
    • 2 between Lycopersicon esculentum cv Allround and L. pennellii for mapping studies. Tomato Genet. Coop. Rep. 42, 27-29.
    • (1992) Tomato Genet. Coop. Rep. , vol.42 , pp. 27-29
    • Odinot, P.1    Pet, G.2    Lindhout, P.3
  • 37
    • 0344570067 scopus 로고
    • Construction, characterization and screening of YAC libraries
    • (Anand, R., ed.). London: Academic Press
    • Riley, J.H., Ogilvie, D. and Anand, R. (1992) Construction, characterization and screening of YAC libraries. In Techniques for the Analysis of Complex Genomes (Anand, R., ed.). London: Academic Press, pp. 59-79.
    • (1992) Techniques for the Analysis of Complex Genomes , pp. 59-79
    • Riley, J.H.1    Ogilvie, D.2    Anand, R.3
  • 38
    • 0040466495 scopus 로고
    • Construction of an overlapping YAC library of the Arabidopsis thaliana genome
    • Schmidt, R., Cnops, G., Bancroft, I. and Dean, C. (1992) Construction of an overlapping YAC library of the Arabidopsis thaliana genome. Aust J. Plant Physiol, 19, 341-351.
    • (1992) Aust J. Plant Physiol , vol.19 , pp. 341-351
    • Schmidt, R.1    Cnops, G.2    Bancroft, I.3    Dean, C.4
  • 39
    • 51249177419 scopus 로고
    • Analysis of the rice (Oryza sativa L.) genome by pulsed field gel electrophoresis and rare cutting restriction endonucleases
    • Sobral, D.W.S., Honeycutt, R.J., Atherley, A.G. and McClelland, A.G. (1990) Analysis of the rice (Oryza sativa L.) genome by pulsed field gel electrophoresis and rare cutting restriction endonucleases. Plant Mol. Biol. Rep. 8, 253-275.
    • (1990) Plant Mol. Biol. Rep. , vol.8 , pp. 253-275
    • Sobral, D.W.S.1    Honeycutt, R.J.2    Atherley, A.G.3    McClelland, A.G.4
  • 40
    • 7344254829 scopus 로고
    • Construction of integrated genetic linkage maps by means of a new computer package: JOINMAP
    • Stam, P. (1993) Construction of integrated genetic linkage maps by means of a new computer package: JOINMAP. Plant J. 3, 739-744.
    • (1993) Plant J. , vol.3 , pp. 739-744
    • Stam, P.1
  • 41
    • 0026482438 scopus 로고
    • High density linkage maps of the tomato and potato genomes
    • Tanksley, S.D., Ganal, M.W., Prince, J.P., et al. (1992) High density linkage maps of the tomato and potato genomes. Genetics, 132, 1141-1160.
    • (1992) Genetics , vol.132 , pp. 1141-1160
    • Tanksley, S.D.1    Ganal, M.W.2    Prince, J.P.3
  • 42
    • 0001838360 scopus 로고
    • Collections of isogenic tomato stocks
    • Tichelaar, E.C. (1984) Collections of isogenic tomato stocks. Rep. Tomato. Genet Coop. 34, 55-57.
    • (1984) Rep. Tomato. Genet Coop. , vol.34 , pp. 55-57
    • Tichelaar, E.C.1
  • 43
    • 0027231899 scopus 로고
    • Chopped inserts: A convenient alternative to agarose/DNA inserts or beads
    • Wang, Y.K. and Schwartz, D.C. (1993) Chopped inserts: a convenient alternative to agarose/DNA inserts or beads. Nucl. Acids Res. 21, 2528.
    • (1993) Nucl. Acids Res. , vol.21 , pp. 2528
    • Wang, Y.K.1    Schwartz, D.C.2
  • 45
    • 0027689324 scopus 로고
    • An improved method of plant megabase DNA isolation in agarose microbeads suitable for physical mapping and YAC cloning
    • Wing, R.A., Rastogi, V.K., Zhang, H.B., Paterson, A.M. and Tanksley, S.D. (1993) An improved method of plant megabase DNA isolation in agarose microbeads suitable for physical mapping and YAC cloning. Plant J. 4, 893-898.
    • (1993) Plant J. , vol.4 , pp. 893-898
    • Wing, R.A.1    Rastogi, V.K.2    Zhang, H.B.3    Paterson, A.M.4    Tanksley, S.D.5
  • 46
    • 0013571295 scopus 로고
    • Genetic and molecular organization of the short arm and pericentric region of tomato chromosome 6
    • van Wordragen, M.F., Weide, R., Liharska, T., Steen van der, A., Koornneef, M. and Zabel. P. (1994) Genetic and molecular organization of the short arm and pericentric region of tomato chromosome 6. Euphytica, 79, 169-174.
    • (1994) Euphytica , vol.79 , pp. 169-174
    • Van Wordragen, M.F.1    Weide, R.2    Liharska, T.3    Steen Van Der, A.4    Koornneef, M.5    Zabel, P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.