Topology of RbsC, a membrane component of the ribose transporter, belonging to the AraH superfamily

Journal of Bacteriology

Volumn 181, Issue 3, 1999, Pages 1039-1042

  Park, Yongkyu ^a   Park, Chankyu ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CARRIER PROTEIN; MEMBRANE PROTEIN;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIAL MEMBRANE; CARBOXY TERMINAL SEQUENCE; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FAMILY;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 0032890882     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.181.3.1039-1042.1999     Document Type: Article

References (28)

1. Bell, A. W., S. D. Buckel, J. M. Groarke, J. N. Hope, D. H. Kingsley, and M. A. Hermodson. 1986. The nucleotide sequences of the rbsD, rhsA, and rbsC genes of Escherichia coli K12. J. Biol. Chem. 261:7652-7658.
2. Boyd, D., and J. Beckwith. 1989. Positively charged amino acid residues can act as topogenic determinants in membrane proteins. Proc. Natl. Acad. Sci. USA 86:9446-9450.
3. Boyd, D., C. Manoil, and J. Beckwith. 1987. Determinants of membrane protein topology. Proc. Natl. Acad. Sci. USA 84:8525-8529.
4. Brickman, E., and J. Beckwith. 1975. Analysis of the regulation of Escherichia coli alkaline phosphatase synthesis using deletions and φ80 transducing phages. J. Mol. Biol. 96:307-316.
5. Dassa, E., and S. Muir. 1993. Membrane topology of MalG. an inner membrane protein from the maltose transport system of Escherichia coli. Mol. Microbiol. 7:29-38.
6. + antiporter TetA(K) from Staphylococcus aureus. J. Bacteriol. 179:3786-3789.
7. Haardt, M., and E. Bremer. 1996. Use of phoA and lacZ fusions to study the membrane topology of ProW, a component of the osmoregulated ProU transport system of Escherichia coli. J. Bacteriol. 178:5370-5381.
8. Hagting, A., J. Velde, B. Poolman, and W. N. Konings. 1997. Membrane topology of the di-and tripeptide transport protein of Lactococcus lactis. Biochemistry 36:6777-6785.
9. Henikoff, S. 1984. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28:351-359.
10. Higgins, C. F. 1992. ABC transporters: from microorganism to man. Annu. Rev. Cell Biol. 8:67-113.
11. Hofmann, K., and W. Stoffel. 1993. TM base - a database of membrane spanning proteins segments. Biol. Chem. Hoppe-Seyler 374:166-170.
12. Hogg, R. W., C. Voelker, and I. Carlowitz. 1991. Nucleotide sequence and analysis of the mgl operon of Escherichia coli K12. Mol. Gen. Genet. 229: 453-459.
13. Kerppola, R. E., and G. F. Ames. 1992. Topology of the hydrophobic membrane-bound components of the histidine periplasmic permease: comparison with other members of the family. J. Biol. Chem. 267:2329-2336.
14. Kim, C., S. Song, and C. Park. 1997. The D-allose operon of Escherichia coli K-12. J. Bacteriol. 179:7631-707.
15. Mourez, M., M. Hofnung, and E. Dassa. 1997. Subunit interactions in ABC transporters: a conserved sequence in hydrophobic membrane proteins of periplasmic permeases defines an important site of interaction with the ATPase subunits. EMBO J. 16:3066-3077.
16. Mowbray, S. L. 1992. Ribose and glucose-galactose receptors: competitors in bacterial chemotaxis. J. Mol. Biol. 227:418-440.
17. Pearce, S. R., M. L. Mimmack, M. P. Gallagher, U. Gileadi, S. C. Hyde, and C. F. Higgins. 1992. Membrane topology of the integral membrane components. OppB and OppC, of the oligopeptide permease of Salmonella typhimurium. Mol. Microbiol. 6:47-57.
18. Prossnitz, E., A. Gee, and G. F. Ames. 1989. Reconstitution of the histidine periplasmic transport system in membrane vesicles: energy coupling and interaction between the binding protein and the membrane complex. J. Biol. Chem. 264:5006-5014.
19. Rosenfeld, S. A., P. E. Tevis, and N. W. Y. Ho. 1984. Cloning and characterization of the xyl genes from Escherichia coli. Mol. Gen. Genet. 194:410-415.
20. Sarsero, J. P., and A. J. Pittard. 1995. Membrane topology analysis of Escherichia coli K-12 Mtr permease by alkaline phosphatase and β-galactosidase fusions. J. Bacteriol. 177:297-306.
21. Saurin, W., and E. Dassa. 1994. Sequence relationships between integral inner membrane proteins of binding protein-dependent transport system: evolution by recurrent gene duplications. Protein Sci. 3:325-344.
22. Saurin, W., W. Koster, and E. Dassa. 1994. Bacterial binding protein-dependent permeases: characterization of distinctive signatures for functionally related integral cytoplasmic membrane proteins. Mol. Microbiol. 12:993-1004.
23. Scripture, J. B., C. Voelker, S. Miller, R. T. O'Donnell, L. Polgar, J. Rade, B. F. Horazdovsky, and R. W. Hogg. 1987. High-affinity L-arabinose transport operon: nucleotide sequence and analysis of gene products. J. Mol. Biol. 197:37-46.
24. Song, S., and C. Park. 1998. Utilization of D-ribose through D-xylose transporter. FEMS Microbiol. Lett. 163:255-261
25. Sugiyama, J. E., S. Mahmoodian, and G. R. Jacobson. 1991. Membrane topology analysis of Escherichia coli mannitol permease by using a nested-deletion method to create mtLA-phoA fusions. Proc. Natl. Acad. Sci. USA 88:9603-9607.
26. von Heijne, G. 1986. The distribution of positively charged residues in bacterial inner membrane proteins correlates with the trans-membrane topology. EMBO J. 5:3021-3027.
27. Wilmes-Riesenberg, M. R., and B. L. Wanner. 1992. TnphoA and TnphoA' elements for making and switching fusions for study of transcription, translation, and cell surface localization. J. Bacteriol. 174:4558-4575.
28. Zaitseva, J., H. Zhang, R. A. Binnie, and M. Hermodson. 1996. The proteins encoded by the rbi operon of Escherichia coli. II. Use of chimeric protein constructs to isolate and characterize RbsC. Protein Sci. 5:1100-1107.