Comparison of enzyme immunoassay and reverse transcriptase PCR for identification of serotype G9 rotaviruses

Journal of Clinical Microbiology

Volumn 37, Issue 10, 1999, Pages 3187-3193

  Coulson, Barbara S ^a   Gentsch, Jon R ^b   Das, Bimal K ^c   Bhan, M K ^c   Glass, Roger I ^b  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^c ALL INDIA INSTITUTE OF MEDICAL SCIENCES   (India)

Author keywords

[No Author keywords available]

Indexed keywords

MONOCLONAL ANTIBODY;

ACCURACY; ARTICLE; ENZYME IMMUNOASSAY; GENOTYPE; NONHUMAN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS; SEROTYPE; VIRUS CHARACTERIZATION; VIRUS CLASSIFICATION; VIRUS CULTURE; VIRUS DETECTION;

RNA VIRUSES; ROTAVIRUS;

EID: 0032880572     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.37.10.3187-3193.1999     Document Type: Article

References (51)

1. Bhan, M. K., J. F. Lew, S. Sazawal, B. K. Das, J. R. Gentsch, and R. I. Glass. 1993. Protection conferred by neonatal rotavirus infection against subsequent rotavirus diarrhea. J. Infect. Dis. 168:282-287.
2. Chen, D. Y., M. K. Estes, and R. F. Ramig. 1992. Specific interactions between rotavirus outer capsid proteins VP4 and VP7 determine expression of a cross-reactive, neutralizing VP4-specific epitope. J. Virol. 66:432-439.
3. Clark, H. F., Y. Hoshino, L. M. Bell, J. Groff, G. Hess, P. Bachman, and P. A. Offit. 1987. Rotavirus isolate WI61 representing a presumptive new human serotype. J. Clin. Microbiol. 25:1757-1762.
4. Coulson, B. S. 1993. Typing of human rotavirus VP4 by an enzyme immunoassay using monoclonal antibodies. J. Clin. Microbiol. 31:1-8.
5. Coulson, B. S. 1987. Variation in neutralization epitopes of human rotaviruses in relation to genomic RNA polymorphism. Virology 159:209-216.
6. Coulson, B. S. 1996. VP4 and VP7 typing using monoclonal antibodies. Arch. Virol. Suppl. 12:113-118.
7. Coulson, B. S., K. J. Fowler, R. F. Bishop, and R. G. Cotton. 1985. Neutralizing monoclonal antibodies to human rotavirus and indications of antigenic drift among strains from neonates. J. Virol. 54:14-20.
8. Coulson, B. S., and C. Kirkwood. 1991. Relation of VP7 amino acid sequence to monoclonal antibody neutralization of rotavirus and rotavirus monotype. J. Virol. 65:5968-5974.
9. Coulson, B. S., C. D. Kirkwood, P. J. Masendycz, R. F. Bishop, and G. Gerna. 1996. Amino acids involved in distinguishing between monotypes of rotavirus G serotypes 2 and 4. J. Gen. Virol. 77:239-245.
10. Coulson, B. S., J. M. Tursi, W. J. McAdam, and R. F. Bishop. 1986. Derivation of neutralizing monoclonal antibodies to human rotaviruses and evidence that an immunodominant neutralization site is shared between serotypes 1 and 3. Virology 154:302-312.
11. Coulson, B. S., L. E. Unicomb, G. A. Pitson, and R. F. Bishop. 1987. Simple and specific enzyme immunoassay using monoclonal antibodies for serotyping human rotaviruses. J. Clin. Microbiol. 25:509-515.
12. Das, B. K., J. R. Gentsch, H. G. Cicirello, P. A. Woods, A. Gupta, M. Ramachandran, R. Kumar, M. K. Bhan, and R. I. Glass. 1994. Characterization of rotavirus strains from newborns in New Delhi, India. J. Clin. Microbiol. 32:1820-1822.
13. Das, B. K., J. R. Gentsch, Y. Hoshino, S. Ishida, O. Nakagomi, M. K. Bhan, R. Kumar, and R. I. Glass. 1993. Characterization of the G serotype and genogroup of New Delhi newborn rotavirus strain 116E. Virology 197:99-107.
14. Dormitzer, P. R., D. Y. Ho, E. R. Mackow, E. S. Mocarski, and H. B. Greenberg. 1992. Neutralizing epitopes on herpes simplex virus-1-expressed rotavirus VP7 are dependent on coexpression of other rotavirus proteins. Virology 187:18-32.
15. Dunn, S. J., J. W. Burns, T. L. Cross, P. T. Vo, R. L. Ward, M. Bremont, and H. B. Greenberg. 1994. Comparison of VP4 and VP7 of five murine rotavirus strains. Virology 203:250-259.
16. Dunn, S. J., R. L. Ward, M. M. McNeal, T. L. Cross, and H. B. Greenberg. 1993. Identification of a new neutralization epitope on VP7 of human serotype 2 rotavirus and evidence for electropherotype differences caused by single nucleotide substitutions. Virology 197:397-404.
17. Dyall Smith, M. L., I. Lazdins, G. W. Tregear, and I. H. Holmes. 1986. Location of the major antigenic sites involved in rotavirus serotype-specific neutralization. Proc. Natl. Acad. Sci. USA 83:3465-3468.
18. Estes, M. K. 1996. Rotaviruses and their replication, p. 1625-1655. In B. N. Fields, D. M. Knipe, P. M. Howley et al. (ed.), Fields virology, vol. 2, 3rd ed. Lippincott-Raven Publishers, Philadelphia, Pa.
19. Flores, J., J. Sears, I. Perez-Schael, L. White, D. Garcia, C. Lanata, and A. Z. Kapikian. 1990. Identification of human rotavirus serotype by hybridization to polymerase chain reaction-generated probes derived from a hyperdivergent region of the gene encoding outer capsid protein VP7. J. Virol. 64: 4021-4024.
20. Gentsch, J. R., B. K. Das, B. Jiang, M. K. Bhan, and R. I. Glass. 1993. Similarity of the VP4 protein of human rotavirus strain 116E to that of the bovine B223 strain. Virology 194:424-430.
21. Gentsch, J. R., R. I. Glass, P. Woods, V. Gouvea, M. Gorziglia, J. Flores, B. K. Das, and M. K. Bhan. 1992. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J. Clin. Microbiol. 30:1365-1373.
22. Gentsch, J. R., P. A. Woods, M. Ramachandran, B. K. Das, J. P. Leite, A. Alfieri, R. Kumar, M. K. Bhan, and R. I. Glass. 1996. Review of G and P typing results from a global collection of rotavirus strains: implications for vaccine development. J. Infect. Dis. 174:S30-S36.
23. Glass, R. I., J. Keith, O. Nakagomi, T. Nakagomi, J. Askaa, A. Z. Kapikian, R. M. Chanock, and J. Flores. 1985. Nucleotide sequence of the structural glycoprotein VP7 gene of Nebraska calf diarrhea virus rotavirus: comparison with homologous genes from four strains of human and animal rotaviruses. Virology 141:292-298.
24. Gorziglia, M., G. Larralde, A. Z. Kapikian, and R. M. Chanock. 1990. Antigenic relationships among human rotaviruses as determined by outer capsid protein VP4. Proc. Natl. Acad. Sci. USA 87:7155-7159.
25. Gouvea, V., R. I. Glass, P. Woods, K. Taniguchi, H. F. Clark, B. Forrester, and Z. Y. Fang. 1990. Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J. Clin. Microbiol. 28:276-282.
26. Gouvea, V., C. Ramirez, B. Li, N. Santos, L. Saif, H. F. Clark, and Y. Hoshino. 1993. Restriction endonuclease analysis of the vp7 genes of human and animal rotaviruses. J. Clin. Microbiol. 31:917-923.
27. Green, K. Y., Y. Hoshino, and N. Ikegami. 1989. Sequence analysis of the gene encoding the serotype-specific glycoprotein (VP7) of two new human rotavirus serotypes. Virology 168:429-433.
28. Green, K. Y., K. Midthun, M. Gorziglia, Y. Hoshino, A. Z. Kapikian, R. M. Chanock, and J. Flores. 1987. Comparison of the amino acid sequences of the major neutralization protein of four human rotavirus serotypes. Virology 161:153-159.
29. Hoshino, Y., and A. Z. Kapikian. 1994. Rotavirus antigens. Curr. Top. Microbiol. Immunol. 185:179-227.
30. Hoshino, Y., M. M. Sereno, K. Midthun, J. Flores, A. Z. Kapikian, and R. M. Chanock. 1985. Independent segregation of two antigenic specificities (VP3 and VP7) involved in neutralization of rotavirus infectivity. Proc. Natl. Acad. Sci. USA 82:8701-8704.
31. Iizuka, M., M. Chiba, O. Masamune, G. Gerna, and O. Nakagomi. 1993. Molecular characterization of human rotavirus VP4 genes by polymerase chain reaction and restriction fragment length polymorphism assay. Microbiol. Immunol. 37:729-735.
32. Ikegami, N., K. Akatani, T. Hosaka, and H. Ushijima. 1987. Prevalence of a new serotype of group A human rotaviruses in Japan, abstr. R11.29, p. 113. In Program and abstracts of the VII International Congress of Virology. National Research Council of Canada, Ottawa, Ontario, Canada.
33. Kapikian, A. Z., and R. M. Chanock. 1996. Rotaviruses, p. 1657-1708. In B. N. Fields, D. M. Knipe, P. M. Howley et al. (ed.), Fields virology, vol. 2, 3rd ed. Lippincott-Raven Publishers, Philadelphia, Pa.
34. Kirkwood, C., P. J. Masendycz, and B. S. Coulson. 1993. Characteristics and location of cross-reactive and serotype-specific neutralization sites on VP7 of human G type 9 rotaviruses. Virology 196:79-88.
35. Lazdins, I., B. S. Coulson, C. Kirkwood, M. Dyall Smith, P. J. Masendycz, S. Sonza, and I. H. Holmes. 1995. Rotavirus antigenicity is affected by the genetic context and glycosylation of VP7. Virology 209:80-89.
36. Lazdins, I., S. Sonza, M. L. Dyall Smith, B. S. Coulson, and I. H. Holmes. 1985. Demonstration of an immunodominant neutralization site by analysis of antigenic variants of SA11 rotavirus. J. Virol. 56:317-319.
37. Midthun, K., J. Valdesuso, A. Z. Kapikian, Y. Hoshino, and K. Y. Green. 1989. Identification of serotype 9 human rotavirus by enzyme-linked immunosorbent assay with monoclonal antibodies. J. Clin. Microbiol. 27:2112-2114.
38. Nakagomi, O., H. Oyamada, and T. Nakagomi. 1989. Use of alkaline Northern blot hybridization for the identification of genetic relatedness of the fourth gene of rotaviruses. Mol. Cell. Probes 3:263-271.
39. Nakagomi, T., K. Akatani, N. Ikegami, N. Katsushima, and O. Nakagomi. 1988. Occurrence of changes in human rotavirus serotypes with concurrent changes in genomic RNA electropherotypes. J. Clin. Microbiol, 26:2586-2592.
40. Nakagomi, T., A. Ohshima, K. Akatani, N. Ikegami, N. Katsushima, and O. Nakagomi. 1990. Isolation and molecular characterization of a serotype 9 human rotavirus strain. Microbiol. Immunol. 34:77-82.
41. Noel, J. S., G. M. Beards, and W. D. Cubitt. 1991. Epidemiological survey of human rotavirus serotypes and electropherotypes in young children admitted to two children's hospitals in northeast London from 1984 to 1990. J. Clin. Microbiol. 29:2213-2219.
42. Padilla-Noriega, L., M. Mendez-Toss, G. Menchaca, J. F. Contreras, P. Romero-Guido, F. I. Puerto, H. Guiscarfe, F. Mota, I. Herrera, R. Cedillo, O. Munoz, J. Calva, M. De Lourdes Guerrero, B. S. Coulson, H. B. Greenberg, S. Lopez, and C. F. Arias. 1998. Antigenic and genomic diversity of human rotavirus VP4 in two consecutive epidemic seasons in Mexico. J. Clin. Microbiol. 36:1688-1692.
43. Ramachandran, M., B. K. Das, A. Vij, R. Kumar, S. S. Bhambal, N. Kesari, H. Rawat, L. Bahl, S. Thakur, P. A. Woods, R. I. Glass, M. K. Bhan, and J. R. Gentsch. 1996. Unusual diversity of human rotavirus G and P genotypes in India. J. Clin. Microbiol. 34:436-439.
44. Ramachandran, M., J. R. Gentsch, U. D. Parashar, S. Jin, P. A. Woods, J. L. Holmes, C. D. Kirkwood, R. F. Bishop, H. B. Greenberg, S. Urasawa, G. Gerna, B. S. Coulson, K. Taniguchi, J. S. Bresee, R. I. Glass, and the National Rotavirus Strain Surveillance System Collaborating Laboratories. 1998. Detection and characterization of novel rotavirus strains in the United States. J. Clin. Microbiol. 34:3223-3229.
45. Shaw, R. D., D. L. Stoner-Ma, M. K. Estes, and H. B. Greenberg. 1985. Specific enzyme-linked immunoassay for rotavirus serotypes 1 and 3. J. Clin. Microbiol. 22:286-291.
46. Shaw, R. D., P. T. Vo, P. A. Offit, B. S. Coulson, and H. B. Greenberg. 1986. Antigenic mapping of the surface proteins of rhesus rotavirus. Virology 155:434-451.
47. Taniguchi, K., T. Urasawa, Y. Monta, H. B. Greenberg, and S. Urasawa. 1987. Direct serotyping of human rotavirus in stools by an enzyme-linked immunosorbent assay using serotype 1-, 2-, 3-, and 4-specific monoclonal antibodies to VP7. J. Infect. Dis. 155:1159-1166.
48. Taniguchi, K., F. Wakasugi, Y. Pongsuwanna, T. Urasawa, S. Ukae, S. Chiba, and S. Urasawa. 1992. Identification of human and bovine rotavirus serotypes by polymerase chain reaction. Epidemiol. Infect. 109:303-312.
49. Unicomb, L. E., B. S. Coulson, and R. F. Bishop. 1989. Experience with an enzyme immunoassay for serotyping human group A rotaviruses. J. Clin. Microbiol. 27:586-588.
50. Unicomb, L. E., G. Podder, J. R. Gentsch, K. Z. Hasan, A. S. G. Faruque, M. J. Albert, and R. I. Glass. 1999. Evidence of high-frequency genomic reassortment of group A rotavirus strains in Bangladesh: emergence of type G9 in 1995. J. Clin. Microbiol. 37:1885-1891.
51. Ushijima, H., H. Koike, A. Mukoyama, A. Hasegawa, S. Nishimura, and J. Gentsch. 1992. Detection and serotyping of rotaviruses in stool specimens by using reverse transcription and polymerase chain reaction amplification. J. Med. Virol. 38:292-297. (Erratum, 44:165, 1994.)