-
1
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
ANDERSON, S., A. T. BANKIER, B. G. BARRELL et al. (14 co-authors). 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-465.
-
(1981)
Nature
, vol.290
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
-
2
-
-
0030056912
-
The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism
-
ARIS-BROSOU, S., and L. EXCOFFIER. 1996. The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Mol. Biol. Evol. 13:494-504.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 494-504
-
-
Aris-Brosou, S.1
Excoffier, L.2
-
3
-
-
0029097280
-
The number of segregating sites in expanding human populations, with implications for estimates of demographic parameters
-
BERTORELLE, G., and M. SLATKIN. 1995. The number of segregating sites in expanding human populations, with implications for estimates of demographic parameters. Mol. Biol. Evol. 12:887-892.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 887-892
-
-
Bertorelle, G.1
Slatkin, M.2
-
4
-
-
0029365975
-
Toward a characterization of landscapes of combinatorial optimization problems, with special attention to the phylogeny problem
-
CHARLESTON, M. A. 1995. Toward a characterization of landscapes of combinatorial optimization problems, with special attention to the phylogeny problem. J. Comput. Biol. 2: 439-450.
-
(1995)
J. Comput. Biol.
, vol.2
, pp. 439-450
-
-
Charleston, M.A.1
-
5
-
-
0028963294
-
The relationship between parsimony and maximum-likelihood analyses: Tree scores and confidence estimates for three real data sets
-
DEBRY, R. W., and L. G. ABELE. 1995. The relationship between parsimony and maximum-likelihood analyses: tree scores and confidence estimates for three real data sets. Mol. Biol. Evol. 12:291-297.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 291-297
-
-
Debry, R.W.1
Abele, L.G.2
-
6
-
-
0030877471
-
The geographic apportionment of mitochondrial genetic diversity in east african chimpanzees, Pan troglodytes schweinfurthii
-
GOLDBERG, T. L., and M. RUVOLO. 1997. The geographic apportionment of mitochondrial genetic diversity in east African chimpanzees, Pan troglodytes schweinfurthii. Mol. Biol. Evol. 14:976-984.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 976-984
-
-
Goldberg, T.L.1
Ruvolo, M.2
-
8
-
-
0031831298
-
Compilation of human mtDNA control region sequences
-
HANDT, O., S. MEYER, and A. VON HAESELER. 1998. Compilation of human mtDNA control region sequences. Nucleic Acids Res. 26:126-129.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 126-129
-
-
Handt, O.1
Meyer, S.2
Von Haeseler, A.3
-
9
-
-
0027428406
-
Toward a more accurate time scale for the human mitochondrial DNA tree
-
HASEGAWA, M., A. DIRIENZO, T. D. KOCHER, and A. C. WILSON. 1993. Toward a more accurate time scale for the human mitochondrial DNA tree. J. Mol. Evol. 37:347-354.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 347-354
-
-
Hasegawa, M.1
Dirienzo, A.2
Kocher, T.D.3
Wilson, A.C.4
-
10
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO, and T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
11
-
-
0026521195
-
Human origins and analysis of mitochondrial DNA sequences
-
HEDGES, S. B., S. KUMAR, K. TAMURA, and M. STONEKING. 1992. Human origins and analysis of mitochondrial DNA sequences. Science 255:737-739.
-
(1992)
Science
, vol.255
, pp. 737-739
-
-
Hedges, S.B.1
Kumar, S.2
Tamura, K.3
Stoneking, M.4
-
12
-
-
0028894410
-
Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs
-
HORAI, S., K. HAYASAKA, R. KONDO, K. TSUGANE, and N. TAKAHATA. 1995. Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs. Proc. Natl. Acad. Sci. USA 92:532-536.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 532-536
-
-
Horai, S.1
Hayasaka, K.2
Kondo, R.3
Tsugane, K.4
Takahata, N.5
-
13
-
-
0029759163
-
How rapidly does the human mitochondrial genome evolve?
-
HOWELL, N., I. KUBACHA, and D. A. MACKEY. 1996. How rapidly does the human mitochondrial genome evolve? Am. J. Hum. Genet. 59:501-509.
-
(1996)
Am. J. Hum. Genet.
, vol.59
, pp. 501-509
-
-
Howell, N.1
Kubacha, I.2
Mackey, D.A.3
-
14
-
-
0001935493
-
Gene genealogies and the coalescent process
-
D. J. FUTUYMA and J. D. ANTONOVICS, eds. Oxford University Press, New York
-
HUDSON, R. R. 1990. Gene genealogies and the coalescent process. Pp. 1-44 in D. J. FUTUYMA and J. D. ANTONOVICS, eds. Oxford surveys in evolutionary biology. Oxford University Press, New York.
-
(1990)
Oxford Surveys in Evolutionary Biology
, pp. 1-44
-
-
Hudson, R.R.1
-
15
-
-
0031992675
-
Mitochondrial mutation rate revisited: Hot spots and polymorphism
-
JAZIN, E., H. SOODYALL, P. JALONEN, E. LINDHOLM, M. STONEKING, and U. GYLLENSTEN. 1998. Mitochondrial mutation rate revisited: hot spots and polymorphism. Nat. Genet. 18: 109-110.
-
(1998)
Nat. Genet.
, vol.18
, pp. 109-110
-
-
Jazin, E.1
Soodyall, H.2
Jalonen, P.3
Lindholm, E.4
Stoneking, M.5
Gyllensten, U.6
-
16
-
-
0000732090
-
Evolution of protein molecules
-
H. N. MUNRO, ed. Academic Press, New York
-
JUKES, T., and C. CANTOR. 1969. Evolution of protein molecules. Pp. 21-132 in H. N. MUNRO, ed. Mammalian protein metabolism. Academic Press, New York.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.1
Cantor, C.2
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences
-
KIMURA, M. 1980. A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0002538268
-
Sequence evolution of mitochondrial DNA in humans and chimpanzees: Control region and protein-coding region
-
S. OSAWA and T. HONJO, eds. Springer-Verlag, Tokyo
-
KOCHER, T. D., and A. C. WILSON. 1991. Sequence evolution of mitochondrial DNA in humans and chimpanzees: control region and protein-coding region. Pp. 391-413 in S. OSAWA and T. HONJO, eds. Evolution of life: fossils, molecules and culture. Springer-Verlag, Tokyo.
-
(1991)
Evolution of Life: Fossils, Molecules and Culture
, pp. 391-413
-
-
Kocher, T.D.1
Wilson, A.C.2
-
20
-
-
0029027992
-
Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling
-
KUHNER, M. K., J. YAMATO, and J. FELSENSTEIN. 1995. Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling. Genetics 140:1421-1430.
-
(1995)
Genetics
, vol.140
, pp. 1421-1430
-
-
Kuhner, M.K.1
Yamato, J.2
Felsenstein, J.3
-
21
-
-
0026667140
-
Estimating substitution rates from molecular data using the coalescent
-
LUNDSTROM, R., S. TAVARÉ, and R. H. WARD. 1992a. Estimating substitution rates from molecular data using the coalescent. Proc. Natl. Acad. Sci. USA 89:5961-5965.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5961-5965
-
-
Lundstrom, R.1
Tavaré, S.2
Ward, R.H.3
-
22
-
-
0027055828
-
Modeling the evolution of the human mitochondrial genome
-
_. 1992b. Modeling the evolution of the human mitochondrial genome. Math. Biosci. 112:319-335.
-
(1992)
Math. Biosci.
, vol.112
, pp. 319-335
-
-
-
23
-
-
0032779612
-
Pattern of nucleotide substitution and rate heterogeneity in the hyper-variable regions I and II of human mtDNA
-
MEYER, S., G. WEISS, and A. VON HAESELER. 1999. Pattern of nucleotide substitution and rate heterogeneity in the hyper-variable regions I and II of human mtDNA. Genetics 152: 1103-1110.
-
(1999)
Genetics
, vol.152
, pp. 1103-1110
-
-
Meyer, S.1
Weiss, G.2
Von Haeseler, A.3
-
24
-
-
0028128340
-
Kin selection, social structure, gene flow, and the evolution of chimpanzees
-
MORIN, P. A., J. J. MOORE, R. CHAKRABORTY, L. JIN, J. GOODALL, and D. S. WOODRUFF. 1994. Kin selection, social structure, gene flow, and the evolution of chimpanzees. Science 265:1193-1201.
-
(1994)
Science
, vol.265
, pp. 1193-1201
-
-
Morin, P.A.1
Moore, J.J.2
Chakraborty, R.3
Jin, L.4
Goodall, J.5
Woodruff, D.S.6
-
26
-
-
0030898192
-
A high observed substitution rate in the human mitochondrial DNA control region
-
PARSONS, T. J., D. S. MUNIEC, K. SULLIVAN et al. (11 co-authors). 1997. A high observed substitution rate in the human mitochondrial DNA control region. Nat. Genet. 15: 363-368.
-
(1997)
Nat. Genet.
, vol.15
, pp. 363-368
-
-
Parsons, T.J.1
Muniec, D.S.2
Sullivan, K.3
-
27
-
-
0029846384
-
Mitochondrial mismatch analysis is insensitive to the mutational process
-
ROGERS, A. R., A. E. FRALEY, M. J. BAMSHAD, W. S. WATKINS, and L. B. JORDE. 1996. Mitochondrial mismatch analysis is insensitive to the mutational process. Mol. Biol. Evol. 13:895-902.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 895-902
-
-
Rogers, A.R.1
Fraley, A.E.2
Bamshad, M.J.3
Watkins, W.S.4
Jorde, L.B.5
-
28
-
-
0023375195
-
The neighbor joining method: A new method for reconstructing phylogenetic trees
-
SAITOU, N., and M. NEI. 1987. The neighbor joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
29
-
-
0032814604
-
Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: Application to human mitochondrial DNA
-
SCHNEIDER, S., and L. EXCOFFIER. 1999. Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA. Genetics 152: 1079-1089
-
(1999)
Genetics
, vol.152
, pp. 1079-1089
-
-
Schneider, S.1
Excoffier, L.2
-
30
-
-
0029880314
-
The effect of topology on estimates of among-site rate variation
-
SULLIVAN, J., K. E. HOLSINGER, and C. SIMON. 1996. The effect of topology on estimates of among-site rate variation. J. Mol. Evol. 42:308-312.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 308-312
-
-
Sullivan, J.1
Holsinger, K.E.2
Simon, C.3
-
31
-
-
0030014298
-
The amount of DNA polymorphism maintained in a finite population when the neutral mutation rate varies among sites
-
TAJIMA, F. 1996. The amount of DNA polymorphism maintained in a finite population when the neutral mutation rate varies among sites. Genetics 143:1457-1465.
-
(1996)
Genetics
, vol.143
, pp. 1457-1465
-
-
Tajima, F.1
-
32
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
TAMURA, K., and M. NEI. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10:512-526.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
-
33
-
-
0015219691
-
Fitting discrete probability distribution to evolutionary events
-
UZZELL, T., and K. W. CORBIN. 1971. Fitting discrete probability distribution to evolutionary events. Science 172: 1089-1096.
-
(1971)
Science
, vol.172
, pp. 1089-1096
-
-
Uzzell, T.1
Corbin, K.W.2
-
35
-
-
0026046333
-
African populations and the evolution of mitochondrial DNA
-
VIGILANT, L. A., M. STONEKING, H. HARPENDING, K. HAWKES, and A. C. WILSON. 1991. African populations and the evolution of mitochondrial DNA. Science 253:1503-1507.
-
(1991)
Science
, vol.253
, pp. 1503-1507
-
-
Vigilant, L.A.1
Stoneking, M.2
Harpending, H.3
Hawkes, K.4
Wilson, A.C.5
-
36
-
-
0027496790
-
Substitution rate variation among sites in hypervariable region I of human mitochondrial DNA
-
WAKELEY, J. 1993. Substitution rate variation among sites in hypervariable region I of human mitochondrial DNA. J. Mol. Evol. 37:613-623.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 613-623
-
-
Wakeley, J.1
-
37
-
-
0031827528
-
Inference of population history using a likelihood approach
-
WEISS, G., and A. VON HAESELER. 1998. Inference of population history using a likelihood approach. Genetics 149: 1539-1546.
-
(1998)
Genetics
, vol.149
, pp. 1539-1546
-
-
Weiss, G.1
Von Haeseler, A.2
-
38
-
-
0030788183
-
Comparative nuclear and mitochondrial genome diversity in humans and chimpanzees
-
WISE, C. A., M. SRAML, D. C. RUBINSZTEIN, and S. EASTEAL. 1997. Comparative nuclear and mitochondrial genome diversity in humans and chimpanzees. Mol. Biol. Evol. 14: 707-716.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 707-716
-
-
Wise, C.A.1
Sraml, M.2
Rubinsztein, D.C.3
Easteal, S.4
-
39
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
YANG, Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39:306-341.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 306-341
-
-
Yang, Z.1
-
40
-
-
0030451420
-
Among-site variation and its impact on phylogenetic analyses
-
_. 1996a. Among-site variation and its impact on phylogenetic analyses. TREE 11:367-372.
-
(1996)
TREE
, vol.11
, pp. 367-372
-
-
-
41
-
-
0030479279
-
Statistical properties of a DNA sample under the finite-sites model
-
_. 1996b. Statistical properties of a DNA sample under the finite-sites model. Genetics 144:1941-1950.
-
(1996)
Genetics
, vol.144
, pp. 1941-1950
-
-
-
43
-
-
0029892459
-
Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites
-
YANG, Z., and S. KUMAR. 1996. Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites. Mol. Biol. Evol. 13: 650-659.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 650-659
-
-
Yang, Z.1
Kumar, S.2
-
44
-
-
0028267146
-
Comparison of models for nucleotide substitution in maximum likelihood phylogenetic estimation
-
YANG, Z., N. GOLDMAN, and A. E. FRIDAY. 1994. Comparison of models for nucleotide substitution in maximum likelihood phylogenetic estimation. Mol. Evol. Biol. 11:316-324.
-
(1994)
Mol. Evol. Biol.
, vol.11
, pp. 316-324
-
-
Yang, Z.1
Goldman, N.2
Friday, A.E.3
-
45
-
-
0029120814
-
Mixed model analysis of DNA sequence evolution
-
YANG, Z., and T. WANG. 1995. Mixed model analysis of DNA sequence evolution. Biometrics 51:552-561.
-
(1995)
Biometrics
, vol.51
, pp. 552-561
-
-
Yang, Z.1
Wang, T.2
|