메뉴 건너뛰기




Volumn 5, Issue 8, 1999, Pages 1034-1041

Negative in vitro selection identifies the rRNA recognition motif for ErmE methyltransferase

Author keywords

MLS resistance; Negative in vitro selection; Protein RNA interaction; rRNA modification

Indexed keywords

BACTERIAL RNA; LINCOSAMIDE; MACROLIDE; METHYLTRANSFERASE; MIKAMYCIN B; NUCLEOTIDE; RIBOSOME RNA;

EID: 0032821318     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838299990349     Document Type: Article
Times cited : (7)

References (29)
  • 3
    • 0028898110 scopus 로고
    • Cleavage of an amide bond by a ribozyme
    • Dai X, de Mesmaeker A, Joyce GF. 1995. Cleavage of an amide bond by a ribozyme. Science 267:237-240.
    • (1995) Science , vol.267 , pp. 237-240
    • Dai, X.1    De Mesmaeker, A.2    Joyce, G.F.3
  • 4
    • 0027225783 scopus 로고
    • A compilation of large subunit (23s and 23S-like) ribosomal RNA structures
    • Gutell RR, Gray MW, Schnare MN. 1993. A compilation of large subunit (23S and 23S-like) ribosomal RNA structures. Nucleic Acids Res 21:3055-3074.
    • (1993) Nucleic Acids Res , vol.21 , pp. 3055-3074
    • Gutell, R.R.1    Gray, M.W.2    Schnare, M.N.3
  • 5
    • 0028261409 scopus 로고
    • Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
    • Gutell RR, Larsen N, Woese CR. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol Rev 58:10-26.
    • (1994) Microbiol Rev , vol.58 , pp. 10-26
    • Gutell, R.R.1    Larsen, N.2    Woese, C.R.3
  • 6
    • 0032902691 scopus 로고    scopus 로고
    • Core sequence in the RNA motif recognized by the ErmE methyltransferase by reducing the enzyme stringency for its target
    • Hansen LH, Vester B, Douthwaite S. 1999. Core sequence in the RNA motif recognized by the ErmE methyltransferase by reducing the enzyme stringency for its target. RNA 5:93-101.
    • (1999) RNA , vol.5 , pp. 93-101
    • Hansen, L.H.1    Vester, B.2    Douthwaite, S.3
  • 7
    • 0028076141 scopus 로고
    • 23S rRNA domain V, a fragment that can be specifically methylated in vitro by the ErmSF (TIrA) methyltransferase
    • Kovalic D, Giannattasio RB, Hyung-Jong J, Weisblum B. 1994. 23S rRNA domain V, a fragment that can be specifically methylated in vitro by the ErmSF (TIrA) methyltransferase. J Bacteriol 176:6992-6998.
    • (1994) J Bacteriol , vol.176 , pp. 6992-6998
    • Kovalic, D.1    Giannattasio, R.B.2    Hyung-Jong, J.3    Weisblum, B.4
  • 8
    • 0028790412 scopus 로고
    • Methylation of minimalist 23s rRNA sequences in vitro by ErmSF (TrIA) N-methyltransferase
    • Kovalic D, Giannattasio RB, Weisblum B. 1995. Methylation of minimalist 23S rRNA sequences in vitro by ErmSF (TrIA) N-methyltransferase. Biochemistry 34:15838-15844.
    • (1995) Biochemistry , vol.34 , pp. 15838-15844
    • Kovalic, D.1    Giannattasio, R.B.2    Weisblum, B.3
  • 9
    • 0023132796 scopus 로고
    • Transfer of the type strain of Streptomyces erythraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacy and goodfellow 1979 as Saccharopolyspora erythraea sp. Nov., and designation of a neotype strain for Streptomyces erythraeus
    • Labeda DP. 1987. Transfer of the type strain of Streptomyces erythraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacy and Goodfellow 1979 as Saccharopolyspora erythraea sp. nov., and designation of a neotype strain for Streptomyces erythraeus. Int J Systematic Bacteriol 37:19-22.
    • (1987) Int J Systematic Bacteriol , vol.37 , pp. 19-22
    • Labeda, D.P.1
  • 12
    • 0021158357 scopus 로고
    • Structure of ribosomal RNA
    • Noller HF. 1984. Structure of ribosomal RNA. Annu Rev Biochem 53:119-162.
    • (1984) Annu Rev Biochem , vol.53 , pp. 119-162
    • Noller, H.F.1
  • 13
    • 0028923775 scopus 로고
    • High-affinity RNA ligands to Escherichia coli ribosomes and ribosomal protein S1: Comparison of natural and unnatural binding sites
    • Ringquist S, Jones T, Snyder T, Gibson T, Bond I, Gold L. 1995. High-affinity RNA ligands to Escherichia coli ribosomes and ribosomal protein S1: Comparison of natural and unnatural binding sites. Biochemistry 34:3640-3648.
    • (1995) Biochemistry , vol.34 , pp. 3640-3648
    • Ringquist, S.1    Jones, T.2    Snyder, T.3    Gibson, T.4    Bond, I.5    Gold, L.6
  • 16
    • 0024271795 scopus 로고
    • Antibiotic resistance mutations in ribosomal RNA genes of Escherichia coli
    • Sigmund CD, Ettayebi M, Borden A, Morgan EA. 1988. Antibiotic resistance mutations in ribosomal RNA genes of Escherichia coli. Methods Enzymol 164:673-690.
    • (1988) Methods Enzymol , vol.164 , pp. 673-690
    • Sigmund, C.D.1    Ettayebi, M.2    Borden, A.3    Morgan, E.A.4
  • 17
    • 0021064473 scopus 로고
    • Site of action of a ribosomal RNA methylase responsible for resistance to erythromycin and other antibiotics
    • Skinner R, Cundliffe E, Schmidt FJ. 1983. Site of action of a ribosomal RNA methylase responsible for resistance to erythromycin and other antibiotics. J Biol Chem 258:12702-12706.
    • (1983) J Biol Chem , vol.258 , pp. 12702-12706
    • Skinner, R.1    Cundliffe, E.2    Schmidt, F.J.3
  • 18
    • 0024241761 scopus 로고
    • Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension
    • Stern S, Moazed D, Noller HF. 1988. Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension. Methods Enzymol 164:481-489.
    • (1988) Methods Enzymol , vol.164 , pp. 481-489
    • Stern, S.1    Moazed, D.2    Noller, H.F.3
  • 19
    • 0028035257 scopus 로고
    • Domain V of 23S rRNA contains all the structural elements necessary for recognition by the ErmE methyltransferase
    • Vester B, Douthwaite S. 1994. Domain V of 23S rRNA contains all the structural elements necessary for recognition by the ErmE methyltransferase. J Bacteriol 176: 6999-7004.
    • (1994) J Bacteriol , vol.176 , pp. 6999-7004
    • Vester, B.1    Douthwaite, S.2
  • 20
    • 0029330769 scopus 로고
    • The conformation of 23S rRNA nucleotide A2058 determines its recognition by the ErmE methyltransferase
    • Vester B, Hansen LH, Douthwaite S. 1995. The conformation of 23S rRNA nucleotide A2058 determines its recognition by the ErmE methyltransferase. RNA 1:501-509.
    • (1995) RNA , vol.1 , pp. 501-509
    • Vester, B.1    Hansen, L.H.2    Douthwaite, S.3
  • 21
    • 0032544482 scopus 로고    scopus 로고
    • ErmE methyltransferase recognition elements in RNA substrates
    • Vester B, Nielsen AK, Hansen LH, Douthwaite S. 1998. ErmE methyltransferase recognition elements in RNA substrates. J Mol Biol 282:255-264.
    • (1998) J Mol Biol , vol.282 , pp. 255-264
    • Vester, B.1    Nielsen, A.K.2    Hansen, L.H.3    Douthwaite, S.4
  • 22
    • 0033582723 scopus 로고    scopus 로고
    • ErmE methyltransferase recognizes features of the primary and secondary structure in a motif within domain V of 23S rRNA
    • Villsen ID, Vester B, Douthwaite S. 1999. ErmE methyltransferase recognizes features of the primary and secondary structure in a motif within domain V of 23S rRNA. J Mol Biol 286:365-374.
    • (1999) J Mol Biol , vol.286 , pp. 365-374
    • Villsen, I.D.1    Vester, B.2    Douthwaite, S.3
  • 23
    • 0028963496 scopus 로고
    • Erythromycin resistance by ribosome modification
    • Weisblum B. 1995. Erythromycin resistance by ribosome modification. Antimicrob Agents Chemother 39:577-585.
    • (1995) Antimicrob Agents Chemother , vol.39 , pp. 577-585
    • Weisblum, B.1
  • 24
    • 0030970582 scopus 로고    scopus 로고
    • 23S rRNA similarity from selection for peptidyl transferase mimicry
    • Welch M, Majerfeld I, Yarus M. 1997. 23S rRNA similarity from selection for peptidyl transferase mimicry. Biochemistry 36:6614-6623.
    • (1997) Biochemistry , vol.36 , pp. 6614-6623
    • Welch, M.1    Majerfeld, I.2    Yarus, M.3
  • 25
    • 0028911845 scopus 로고
    • In vitro evolution of a self-alkylating ribozyme
    • Wilson C, Szostak WJ. 1995. In vitro evolution of a self-alkylating ribozyme. Nature 374:777-782.
    • (1995) Nature , vol.374 , pp. 777-782
    • Wilson, C.1    Szostak, W.J.2
  • 26
    • 0030902818 scopus 로고    scopus 로고
    • Solution structure of an rRNA methyltransferase (ErmAM) that confers macrolide-lincosamide-streptogramin antibiotic resistance
    • Yu L, Petros AM, Schnuchel A, Zhong P, Severin JM, Walter K, Holzman TF, Fesik SW. 1997. Solution structure of an rRNA methyltransferase (ErmAM) that confers macrolide-lincosamide-streptogramin antibiotic resistance. Nature Struct Biol 4:483-489.
    • (1997) Nature Struct Biol , vol.4 , pp. 483-489
    • Yu, L.1    Petros, A.M.2    Schnuchel, A.3    Zhong, P.4    Severin, J.M.5    Walter, K.6    Holzman, T.F.7    Fesik, S.W.8
  • 27
    • 0024361081 scopus 로고
    • Methylation of 23S rRNA caused by tlrA (ermSF), a tylosin resistance determinant from Streptomyces fradiae
    • Zalacain M, Cundliffe E. 1989. Methylation of 23S rRNA caused by tlrA (ermSF), a tylosin resistance determinant from Streptomyces fradiae. J Bacteriol 171:4254-4260.
    • (1989) J Bacteriol , vol.171 , pp. 4254-4260
    • Zalacain, M.1    Cundliffe, E.2
  • 28
    • 0030688863 scopus 로고    scopus 로고
    • Peptide bond formation by in vitro selected ribozymes
    • Zhang B, Cech TR. 1997. Peptide bond formation by in vitro selected ribozymes. Nature 390:96-100.
    • (1997) Nature , vol.390 , pp. 96-100
    • Zhang, B.1    Cech, T.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.