A local, high-density, single-nucleotide polymorphism map used to clone Caenorhabditis elegans cdf-1

Genetics

Volumn 153, Issue 2, 1999, Pages 743-752

  Jakubowski, Janelle ^a   Kornfeld, Kerry ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CAENORHABDITIS ELEGANS; CELL FATE; DNA SEQUENCE; GENE DELETION; GENE INSERTION; GENE MAPPING; GENE MUTATION; GENETIC MARKER; GENETIC POLYMORPHISM; MOLECULAR CLONING; NONHUMAN; ONCOGENE RAS; PHENOTYPE; PRIORITY JOURNAL; VULVA;

ANIMALS; BASE SEQUENCE; CAENORHABDITIS ELEGANS; CHROMOSOME MAPPING; CLONING, MOLECULAR; DNA PRIMERS; DNA, HELMINTH; FEMALE; OPEN READING FRAMES; PHENOTYPE; POINT MUTATION; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; VULVA;

CAENORHABDITIS ELEGANS; INVERTEBRATA;

EID: 0032819199     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (32)

1. BARSTEAD, R. J., L. KLEIMAN and R. H. WATERSTON, 1991 Cloning, sequencing, and mapping of an α-actinin gene from the nematode Caenorhabditis elegans. Cell Motil. Cytoskeleton 20: 69-78.
2. BETTEL, G. J., S. G. CLARK and H. R. HORVITZ, 1990 Caenorhabditis elegans ras gene let-60 acts as a switch in the pathway of vulval induction. Nature 348: 503-509.
3. BRENNER, S., 1974 The genetics of Caenorhabditis elegant. Genetics 77: 71-94.
4. ELEGANS SEQUENCING CONSORTIUM, 1998 Genome sequence of the nematode C. elegans: a platform for investigating biology. Science 282: 2012-2018.
5. CONKLIN, D. S., J. A. MCMASTER, M. R. CULBERTSON and C. KUNG, 1992 COTI, a gene involved in cobalt accumulation in Saccharomyces cerevisiae. Mol. Cell. Biol. 12: 3678-3688.
6. COULONDRE, C., and J. H. MILLER, 1977 Genetic studies of the lac repressor. IV. Mutagenic specificity in the LacI gene of Escherichia coli. J. Mol. Biol. 117: 577-606.
7. COULSON, A., R. WATERSTON, J. KIFF, J. SULSTON and Y. KOHARA, 1988 Genome linking with yeast artificial chromosomes. Nature 355: 184-186.
8. HODGKIN, J., 1993 Molecular cloning and duplication of the nematode sex-determining gene tra-1. Genetics 133: 543-560.
9. HORVITZ, H. R., and P. W. STERNBERG, 1991 Multiple intercellular signalling systems control the development of the Caenorhabditis elegans vulva. Nature 351: 535-541.
10. HORVITZ, H. R., S. BRENNER, J. HODGKIN and R. K. HERMAN, 1979 A uniform genetic nomenclature for the nematode Caenorhabditis elegans. Mol. Gen. Genet. 175: 129-133.
11. JACOBS, D., G. J. BETTEL, S. G. CLARK, H. R. HORVITZ and K. KORNFELD, 1998 Gain-of-function mutations in the Caenorhabditis elegans lin-I ETS gene identify a C-terminal regulatory domain phosphorylated by ERK MAP kinase. Genetics 149: 1809-1822.
12. KAMIZONO, A., M. NISHIZAWA, Y. TERANISHI, K. MURATA and A. KIMURA, 1989 Identification of a gene conferring resistance to zinc and cadmium ions in the yeast. Saccharomyces cerevisiae. Mol. Gen. Genet. 219: 161-167.
13. KIMURA, K. D., H. A. TISSENBAUM, Y. LIU and G. RUVKUN, 1997 daf-2, an insulin receptor-like gene that regulates longevity and diapause in Caenorhabditis elegans. Science 277: 942-926.
14. KORNFELD, K., 1997 Vulval development in Caenorhabditis elegans. Trends Genet. 13: 55-61.
15. KORNFELD, K., K.-L. GUAN and H. R. HORVITZ, 1995a The Caenorhabditis elegans gene mek-2 is required for vulval induction and encodes a protein similar to the protein kinase MEK. Genes Dev. 9: 756-768.
16. KORNFELD, K., D. B. HOM and H. R. HORVITZ, 1995b The ksr-1 gene encodes a novel protein kinase involved in Ras-mediatcd signaling in C. elegans. Cell 83: 903-913.
17. KORSWAGEN, H. C., R. M. DURBIN, M. T. SMITS and R. H. A. PLASTERK, 1996 Transposon Tc1-derived, sequence-tagged sites in Caenorhabditis elegans as markers for gene mapping. Proc. Natl. Acad. Sci. USA 93: 14680-14685.
18. KWOK, P.-Y., Q. DENG, H. ZAKERI, S. L. TAYLOR and D. A. NICKERSON, 1996 Increasing the information content of STS-based genome maps: identifying polymorphisms in mapped STSs. Genomics 31: 123-126.
19. LACKNER, M. L., K. KORNFELD, L. M. MILLER, H. R. HORVITZ and S. K. KIM, 1994 A MAP kinase homolog, mpk-1, is involved in ras-mediated induction of vulval cell fates in Caenorhabditis elegans. Genes Dev. 8: 160-173.
20. LAI, E., J. RILEY, I. PURVIS and A. ROSES, 1998 A 4-Mb high-density single nucleotide polymorphism-based map around human APOE. Genomics 54: 31-38.
21. LANDEGREN, U., M. NILSSON and P.-Y. KWOK, 1998 Reading bits of genetic information: methods for single-nucleotide polymorphism analysis. Genome Res. 8: 769-776.
22. MELLO, C. C., J. M. KRAMER, D. STINCHCOMB and V. AMBROS, 1991 Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration. EMBO J. 10: 3959-3970.
23. OGG, S., S. PARADIS, S. GOTTLIEB, G. I. PATTERSON, L. LEE et al., 1997 The Forkhead transcription factor DAF-16 transduces insulin-like metabolic and longevity signals in C. elegans. Nature 389:994-999.
24. PALMITER, R. D., and S. D. FINDLEY, 1995 Cloning and functional characterization of a mammalian zinc transporter that confers resistance to zinc. EMBO J. 14: 639-649.
25. PALMITER, R. D., T. B. COLE and S. D. FINDLEY, 1996 ZnT-2, a mammalian protein that confers resistance to zinc by facilitating vesicular sequestration. EMBO J. 15: 1784-1791.
26. PAULSEN, I. T., and M. H. SAIER, JR., 1997 A novel family of ubiquitous heavy metal ion transport proteins. J. Membr. Biol. 156: 99-105.
27. RIDDLE, D. L., T. BLUMENTAL, B. J. MEYER and J. R. PRIESS (Editors), 1997 C. elegans II. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
28. RUVKUN, G., V. AMBROS, A. COULSON, R. WATERSTON, J. SULSTON et al., 1989 Molecular genetics of the Caenorhabditis elegans heterochronic gene lin-14. Genetics 121: 501-516.
29. SAMBROOK, J., E. F. FRITSCH and T. MANIATIS, 1989 Molecular Claning: A Laboratory Manual, Ed. 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
30. SAVAGE, C., M. HAMELIN, J. G. CULOTTI, A. COULSON, D. G. ALBERTSON et al., 1989 mec-7 is a β-tubulin gene required for the production of 15-protofilament microtubules in Caenorhabditis elegans. Genes Dev. 3: 870-881.
31. WILLIAMS, B. D., B. SCHRANK, C. HUYNH, R. SHOWNKEEN and R. H. WATERSTON, 1992 A genetic mapping system in Caenorhabditis elegans based on polymorphic sequence-tagged sites. Genetics 131: 609-624.
32. WONG, D. G., J.-B. FAN, C.-J. SIAO, A. BERNO, P. YOUNG et al., 1998 Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome. Science 280: 1077-1082.