Evolution of chordate Hox gene clusters

Annals of the New York Academy of Sciences

Volumn 870, Issue , 1999, Pages 238-248

  Ruddle, Frank H ^a   Amemiya, Chris T ^d   Carr, Janet L ^b   Kim, Chang Bae ^a   Ledje, Christina ^a   Shashikant, Cooduvalli S ^c   Wagner, Günter P ^a  

^a YALE UNIVERSITY   (United States)

^b Clinical Data Inc   (United States)

^c PENNSYLVANIA STATE UNIVERSITY   (United States)

^d BOSTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHORDATA; CONFERENCE PAPER; EVOLUTION; GENE CLUSTER; GENE DUPLICATION; GENETIC MODEL; NONHUMAN;

CHORDATA; INVERTEBRATA; TRIXIS; VERTEBRATA;

EID: 0032796625     PISSN: 00778923     EISSN: None     Source Type: Book Series    
DOI: 10.1111/j.1749-6632.1999.tb08884.x     Document Type: Conference Paper

References (35)

1. KRUMLAUF, R. 1994. Hox genes in vertebrate development. Cell 78: 191-201.
2. McGINSIS, W. & R. KRUMLAUF. 1992. Homeobox genes and axial patterning. Cell 68: 283-302.
3. SHASHIKANT, C.S., M.F. UTSET, S.M. VIOLETTE, T.L. WISE, P. EINAT, M. EINAT, J.W. PENDLETON, K. SCHUGHART & F.H. RUDDLE. 1991. Homeobox genes in mouse development. Crit. Rev. Eukaryotic Gene Expression. 1: 207-245.
4. RUDDLE, F.H., J.L. BARTELS, K.L. BENTLEY, C. KAPPEN, M.T. MURTHA & J.W. PENDLETON. 1994. Evolution of Hox genes. Annu. Rev. Genet. 28: 423-442.
5. OHNO, S. 1970. Evolution by Gene Duplication. Springer-Verlag, New York.
6. SHASHIKANT, C.S., C.J. BIEBERICH, H.G. BELTING, J.C. WANG, M.A. BORBELY & F.H. RUDDLE. 1995. Regulation of Hoxc-8 during mouse embryonic development: Identification and characterization of critical elements involved in early neural tube expression. Development 121: 4339-4347.
7. SHASHIKANT, C.S., C.B. KIM, M. BORBELY, W. WANG & F.H. RUDDLE. 1998. Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element. Proc. Natl. Acad. Sci. USA 95: 15446-15451.
8. BELTING, H.G., C.S. SHASHIKANT & F.H. RUDDLE. 1998. Modification of expressionand cis-regulation of Hoxc8 in the evolution of diverged axial morphology. Proc. Natl. Acad. Sci. USA 95: 2355-2360.
9. APARICIO, S., K. HAWKER, A. COTTAGE, Y. MIKAWA, L. ZUO, B. VENKATESH, E. CHEN, R. KRUMLAUF & S. BRENNER. 1997. Organization of the Fugu rubripes Hox clusters: Evidence for continuing evolution of vertebrate Hox complexes. Nat. Genet. 16: 79-83.
10. PENDLETON, J.W., B.K. NAGAI, M.T. MURTHA & F.H. RUDDLE. 1993. Expansion of the Hox gene family and the evolution of chordates. Proc. Natl. Acad. Sci. USA 90: 6300-6304.
11. MISOF, B.Y. & G.P. WAGNER. 1996, Evidence for four Hox clusters in the killifish Fundulus heteroclitus (teleostei). Mol. Phylogenel, Evol. 5: 309-322.
12. STUART, J.J., S.J. BROWN, R.W. BEEMAN & R.E. DENELL. 1993. The Tribolium homeotic gene abdominal is homologous to abdominal-A of the Drosophila bithorax complex. Development 117: 233-243.
13. WANG, B.B., M.M. MULLER-IMMERGLUCK, J. AUSTIN, N.T. ROBINSON, A. CHISHOLM & C. KENYON. 1993. A homeotic gene cluster patterns the anteroposterior body axis of C. elegans. Cell 74: 29-42.
14. KENYON, C. & B. WANG. 1991. A cluster of Antennapedia-class homeobox genes in a nonsegmented animal. Science 253: 516-517.
15. GARCIA-FERNANDEZ, J. & P.W. HOLLAND. 1994. Archetypal organization of the amphioxus Hox gene cluster. Nature 370: 563-566.
16. AVEROF, M. & M. AKAM. 1995. Hox genes and the diversification of insect and crustacean body plans. Nature 376: 420-423.
17. HOLLAND, P.W. 1997. Vertebrate evolution: Something fishy about Hox genes. Curr. Biol. 7: R570-572.
18. SPRING, J. 1997. Vertebrate evolution by in interspecific hybridisation-Are we polyploid? FEBS Lett. 400: 2-8.
19. SIDOW, A. 1996. Gen(om)e duplications in the evolution of early vertebrates. Curr. Opin. Genet. Dev. 6: 715-722.
20. SHARMAN, A. & P. HOLLAND. 1996. Conservation, duplication, and divergence of developmental genes during chordate evolution. Netherlands Zoo. 46: 47-67.
21. RUDDLE, F.H. 1997. Vertebrate genome evolution - The decade ahead. Genomics 46: 171-173.
22. AMORES, A., A. FORCE, Y.-L. YAN, L. JOLLY, C. AMEMIYA, A. FRTTZ, R.K. HO, J. LANGELAND, V. PRINCE, Y.-L. WANG, M. WESTERFIELD, M. EKKER & J.H. POSTLETHWAIT. 1998. Zebrafish clusters and vertebrate genome evolution. Science 282: 1711-1714.
23. GELLON, G. & W. McGINNIS. 1998. Shaping animal body plans in development and evolution by modulation of Hox expression patterns. Bioessays 20: 116-125.
24. CARROLL, S.B. 1998. From pattern to gene, from gene to pattern, Int. J. Dev. Biol. 42: 305-309,25.
25. CARROLL, S.B. 1995. Homeotic genes and the evolution of arthropods and chordates. Nature 376: 479-485.
26. SHASHIKANT, C.S. & F.H. RUDDLE. 1996. Combinations of closely situated cis-acting elements determine tissue-specific patterns and anterior extent of early Hoxc8 expression. Proc. Natl. Acad. Sci. USA 93: 12364-12369.
27. LE MOUELLIC, H., Y. LALLEMAND & P. BRULET. 1992. Homeosis in the mouse induced by a null mutation in the. Hox-3.1 gene. Cell 69: 251-264.
28. TIRET, L., H. LE MOUELLIC, M. MAURY & P. BRULET. 1998. Increased apoptosis of motoneurons and altered somatotopic maps in the brachial spinal cord of Hoxc-8-deficient mice. Development 125: 279-291.
29. POLLOCK, R.A., G. JAY & C.J. BIEBERICH. 1992. Altering the boundaries of Hox 3.1 expression: Evidence for antipodal gene regulation. Cell 71: 911-923.
30. CARR, J.L., C.S. SHASHIKANT, W.J. BAILEY & F.H. RUDDLE. 1998. Molecular evolution of Hox gene regulation: Cloning and transgenic analysis of the lamprey HoxQ8 gene. J. Exp. Zool. 280: 73-85.
31. HOLLAND, P.W. & J. GARCIA-FERNANDEZ. 1996. Hox genes and chordate evolution. Dev. Biol. 173: 382-395.
32. SIMMEN, M.W., S. LEITGEB, V.H. CLARK, S.J. JONES & A. BIRD. 1998. Gene number in an invertebrate chordate, Ciona intestinalis. Proc. Natl. Acad. Sci. USA 95: 4437-4440.
33. JEFFERIES, R.P.S, & A.G. JACOBSON. 1998. An episode in the ancestry of vertebrates: From mitrate to crown-group craniate. Integr. Biol. 115-132.
34. BAILEY, W.J., J. KIM, G.P. WAGNER & F.H. RUDDLE. 1997. Phylogenetic reconstuction of vertebrate Hox cluster duplications. Mol. Biol. Evol. 14: 843-853.
35. CAPECCHI, M.R. 1997. Hox genes and mammalian development. Cold Spring Harb. Symp. Quant. Biol. 62: 273-281.