Double-strand break-induced recombination between ectopic homologous sequences in somatic plant cells

Genetics

Volumn 152, Issue 3, 1999, Pages 1173-1181

  Puchta, Holger ^a  

^a LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA;

ARTICLE; DNA REPAIR; DNA STRAND BREAKAGE; EUKARYOTE; GENE REARRANGEMENT; GENETIC RECOMBINATION; NONHUMAN; PHYTOCHEMISTRY; PLANT CELL; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL;

BASE SEQUENCE; DNA; DNA REPAIR; GENOME, PLANT; KANAMYCIN RESISTANCE; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PLANTS, GENETICALLY MODIFIED; PLANTS, TOXIC; RECOMBINATION, GENETIC; TOBACCO;

AGROBACTERIUM; EMBRYOPHYTA; EUKARYOTA; NICOTIANA OBTUSIFOLIA; NICOTIANA TABACUM;

EID: 0032779205     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (34)

1. BAKER, M. D., L. R. READ, B. G. BEATTY and P. NG, 1996 Requirements for ectopic homologous recombination in mammalian somatic cells. Mol. Cell. Biol. 16: 7122-7132.
2. CHIURAZZI, M., A. RAY, J.-F. VIRET, R. PERERA, X.-H. WANG et al., 1996 Enhancement of somatic intrachromosomal homologous recombination in Arabidopsis by HO-endonuclease. Plant Cell 8: 2057-2066.
3. DOONER, H. K., and I. M. MARTINEZ-FEREZ, 1997 Germinal excisions of the maize transposon activator do not stimulate meiotic recombination or homology-dependent repair at the bz locus. Genetics 147: 1923-1932.
4. GODWIN, A. R., R. J. BOLLAG, D. M. CHRISTIE and R. M. LISKAY, 1994 Spontaneous and restriction enzyme-induced chromosomal recombination in mammalian cells. Proc. Natl. Acad. Sci. USA 91: 12554-12558.
5. GORBUNOVA, V., and A. A. LEVY, 1997 Non-homologous DNA end joining in plant cells is associated with deletions and filler DNA insertions. Nucleic Acids Res. 25: 4650-4657.
6. HABER, J. E., 1995 In vivo biochemistry: physical monitoring of recombination induced by site-specific endonucleases. Bioassays 17: 609-620.
7. HROUDA, M., and J. PASZKOWSKI, 1994 High fidelity extrachromosomal recombination and gene targeting in plants. Mol. Gen. Genet. 243: 106-111.
8. HU, W., M. C. P. TIMMERMANS and J. MESSING, 1998 Interchromosomal recombination in Zea mays. Genetics 150: 1229-1237.
9. 1, arrest. Proc. Natl. Acad. Sci. USA 93: 4827-4832.
10. JASIN, M., 1996 Genetic manipulation of genomes with rare-cutting endonucleases. Trends Genet. 12: 224-228.
11. LEBEL, E. G., J. MASSON, A. BOGUCKI and J. PASZKOWSKI, 1993 Stress-induced intrachromosomal recombination in plant somatic cells. Proc. Natl. Acad. Sci. USA 90: 422-426.
12. LICHTEN, M., and J. E. HABER, 1989 Position effects in ectopic and allelic mitotic recombination in Saccharomyces cerevisiae. Genetics 123: 261-268.
13. MOYNAHAN, M. E., and M. JASIN, 1997 Loss of heterozygosity induced by a chromosomal double-strand break. Proc. Natl. Acad. Sci. USA 94: 8988-8993.
14. NACRY, P., G. CAMILLERI, B. COURTIAL, M. CABOCHE and D. BOUCHEZ, 1998 Major chromosomal rearrangements induced by T-DNA transformation in Arabidopsis. Genetics 149: 641-650.
15. NASSIF, N., J. PENNY, S. PAL, W. R. ENGELS and G. B. GLOOR, 1994 Efficient copying of nonhomologous sequences from ectopic sites via P-element induced gap repair. Mol. Cell. Biol. 14: 1613-1625.
16. NATARAJAN, A. T., H. H. F. MULLENDERS, M. MEIJERS and U. MUKHERJEE, 1985 Induction of sister chromatid exchanges by restriction endonucleases. Mutat. Res. 144: 33-39.
17. PUCHTA, H., 1998 Repair of genomic double-strand breaks in somatic plant cells by one-sided invasion of homologous sequences. Plant J. 13: 331-339.
18. PUCHTA, H., 1999 Use of I-SceI to induce double-strand breaks in Nicotiana, in DNA Repair Protocols: Eukaryotic Systems, Methods in Molecular Biology, edited by D. S. HENDERSON. Humana Press, Clifton, NJ.
19. PUCHTA, H., and B. HOHN, 1996 From centiMorgans to basepairs: homologous recombination in plants. Trends Plant Sci. 1: 340-348.
20. PUCHTA, H., B. DUJON and B. HOHN, 1993 Homologous recombination in plant cells is enhanced by in vivo induction of double-strand breaks into DNA bay a site-specific endonuclease. Nucleic Acids Res. 21: 5034-5040.
21. PUCHTA, H., P. SWOBODA and B. HOHN, 1995 Induction of intrachromosomal recombination in whole plants. Plant J. 7: 203-210.
22. PUCHTA, H., B. DUJON and B. HOHN, 1996 Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination. Proc. Natl. Acad. Sci. USA 93: 5055-5060.
23. RUBIN, E., and A. A. LEVY, 1997 Abortive gap repair: the underlying mechanism for Ds elements formation. Mol. Cell. Biol. 17: 6294-6302.
24. SALOMON, S., and H. PUCHTA, 1998 Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells. EMBO J. 17: 6086-6095.
25. SHALEV, G., and A. A. LEVY, 1997 The maize transposable element Acinduces recombination between the donor site and an homologous ectopic sequence. Genetics 146: 1143-1151.
26. SHULMAN, M. J., C. COLLINS, A. CONNOR, L. R. READ and M. D. BAKER, 1995 Interchromosomal recombination is suppressed in mammalian somatic cells. EMBO J. 14: 4102-4107.
27. SIMPSON, G. G., A. ROE and R. C. LEWONTIN, 1960 Quantitative Zoology. Harcourt, Brace and World, New York.
28. SWOBODA, P., S. GAL, B. HOHN and H. PUCHTA, 1994 Intrachromosomal homologous recombination in whole plants. EMBO J. 13: 481-489.
29. SZOSTAK, J. W., T. L. ORR-WEAVER, R. J. ROTHSTEIN and F. W. STAHI., 1983 The double strand break repair model of recombination. Cell 33: 25-35.
30. TAKAHASHI, N. K., K. YAMAMOTO, Y. KITAMURA, S. Q. LUO, H. YOSHIKURA et al., 1992 Nonconservative recombination in Escherichia coli. Proc. Natl. Acad. Sci. USA 89: 5912-5916.
31. TINLAND, B., F. SCHOUMACHER, V. GLOEKLER, A.-M. BRAVO and B. HOHN, 1995 The Agrobacterium tumefaciens virulence D2 protein is responsible for the precise integration of T-DNA into the plant genome. EMBO J. 19: 3585-3595.
32. TOVAR, J., and C. LIGHTENSTEIN, 1992 Somatic and meiotic chromosomal recombination between inverted duplications in transgenic tobacco plants. Plant Cell 4: 319-332.
33. VILLEMURE, J. F., A. BELMAAZA and P. CHARTRAND, 1997 The processing of DNA ends at double-strand breaks during homologous recombination: different roles for the two ends. Mol. Gen. Genet. 256: 533-538.
34. YAMAMOTO, K., K. KUSANO, N. K. TAKAHASHI, H. YOSHIKURA and I. KOBAYASHI, 1992 Gene conversion in the Escherichia coli RecF pathway: a successive half crossing-over model. Mol. Gen. Genet. 234: 1-13.