YAC contigs and restriction maps of chromosomes 4 and 5 from the cloned line 3D7 of Plasmodium falciparum

Molecular and Biochemical Parasitology

Volumn 102, Issue 1, 1999, Pages 197-204

  Thompson, Jennifer K ^a   Caruana, Sonia R ^a   Cowman, Alan F ^a  

^a NONE

Author keywords

Chromosome; Physical map; Plasmodium falciparum; Yeast artificial chromosomes

Indexed keywords

ANIMAL EXPERIMENT; CHROMOSOME 2; CHROMOSOME 4; CHROMOSOME 5; CONTROLLED STUDY; GENE MAPPING; MULTIGENE FAMILY; NONHUMAN; PLASMODIUM FALCIPARUM; PRIORITY JOURNAL; RESTRICTION FRAGMENT; SHORT SURVEY; YEAST ARTIFICIAL CHROMOSOME;

ANIMALIA; PLASMODIUM FALCIPARUM; PROTOZOA;

EID: 0032775052     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0166-6851(99)00072-9     Document Type: Article

References (27)

1. Rubio J.P., Thompson J.K., Cowman A.F. The var genes of Plasmodium falciparum are located in the subtelomeric region of most chromosomes. EMBO J. 15:1996;4069-4077.
2. Fischer K., Horrocks P., Preub M., Wiesner J., Wunsch S., Camargo A.A., Lanzer M. Expression of var genes located within polymorphic subtelomeric domains of Plasmodium falciparum chromosomes. Mol. Cell. Biol. 17:1997;3679-3686.
3. Thompson J.K., Cowman A.F. A YAC contig and high resolution restriction map of chromosome 3 from Plasmodium falciparum. Mol. Biochem. Parasitol. 90:1997;537-542.
4. Cheng Q., Cloonan N., Fischer K., Thompson J., Waine G., Lanzer M., Saul A. stevor and rif are Plasmodium falciparum multicopy gene families which potentially encode variant antigens. Mol. Biochem. Parasitol. 97:1998;161-176.
5. Hernandez-Rivas R., Mattei D., Sterkers Y., Peterson D.S., Wellems T.E., Scherf A. Expressed var genes are found in Plasmodium falciparum subtelomeric regions. Mol. Cell. Biol. 17:1997;604-611.
6. Holt DC, Bourke PF, Mayo M, Kemp DJ. A high resolution map of chromosome 9 of Plasmodium falciparum. Mol Biochem Prasitol 1998 (in press).
7. Rubio J.P., Triglia T., Kemp D.J., de Bruin D., Ravetch J.V., Cowman A.F. A YAC contig map of Plasmodium falciparum chromosome 4: characterization of a DNA amplification between two recently separated isolates. Genomics. 26:1995;192-198.
8. Foster J., Thompson J. The Plasmodium falciparum genome project: a resource for researchers. Parasitol. Today. 11:1995;1-4.
9. Su X.-Z., Wellems T.E. Toward a high-resolution Plasmodium falciparum linkage map: polymorphic markers from hundreds of simple sequence repeats. Genomics. 33:1996;430-444.
10. de Bruin D., Lanzer M., Ravetch J.V. The polymorphic subtelomeric regions of Plasmodium falciparum chromosomes contain arrays of repetitive sequence elements. Proc. Natl. Acad. Sci. USA. 91:1994;619-623.
11. Thompson J.K., Rubio J.P., Caruana S., Brockman A., Wickham M.E., Cowman A.F. The chromosomal organization of the Plasmodium falciparum var gene family is conserved. Mol. Biochem. Parasitol. 87:1997;49-60.
12. Dame JB, Arnot DE, Bourke PF, Chakrabarti D, Christodoulou Z, Coppel RL, Cowman AF, Craig AG, Fiscker K, Foster J, Goodman N, Hintergerg K, Holder AA, Holt DC, Kemp DJ, Lanzer M, Lim A, Newbold CI, Ravetch JV, Reddy GR, Rubio J, Schuster SM, Su X-Z, Thompson K, Vital F, Wellems TE, Werner EB Current status of the Plasmodium falciparum genome project. Mol Biochem Parasitol. 79:1996;1-12.
13. Foote S.J., Thompson J.K., Cowman A.F., Kemp D.J. Amplification of the multidrug resistance gene in some chloroquine-resistant isolates of P. falciparum. Cell. 57:1989;921-930.
14. Cowman A.F., Galatis D., Thompson J.K. Selection for mefloquine resistance in Plasmodium falciparum is linked to amplification of the pfmdr1 gene and cross-resistance to halofantrine and quinine. Proc. Natl. Acad. Sci. USA. 91:1994;1143-1147.
15. Corcoran L.M., Thompson J.K., Walliker D., Kemp D.J. Homologous recombination within subtelomeric repeat sequences generates chromosome size polymorphisms in P. falciparum. Cell. 53:1988;807-813.
16. Pologe L.G., Ravetch J.V. Large deletions result from breakage and healing of Plasmodium falciparum chromosomes. Cell. 55:1988;869-874.
17. Oquendo P., Goman M., Mackay M., Langsley G., Walliker D., Scaife J. Characterisation of a repetitive DNA sequence from the malaria parasite, Plasmodium falciparum. Mol. Biochem. Parasitol. 18:1986;89-101.
18. Gardner M.J., Tettelin H., Carucci D.J., Cummings L.M., Aravind L., Koonin E.V., Shallom S., Mason T., Yu K., Fujii C., Pederson J., Shen K., Jing J., Aston C., Lai Z., Schwartz D.C., pertea M., Salzberg S., Zhou L., Sutton G.G., Clayton R., White O., Smith H.O., Fraser C.M., Adams M.D., Venter J.C., Hoffman S.L. Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum. Science. 282:1998;1126-1132.
19. Pologe L.G., Ravetch J.V. A chromosomal rearrangement in a P. falciparum histidine-rich protein gene is associated with the knobless phenotype. Nature. 322:1986;474-477.
20. Ravetch J.V., Kochan J., Perkins M. Isolation of the gene for a glycophorin-binding protein implicated in erythrocyte invasion by a malaria parasite. Science. 227:1985;1593-1597.
21. Karcz S.R., Herrmann V.R., Trottein F., Cowman A.F. Cloning and characterization of the vacuolar ATPase B subunit from Plasmodium falciparum. Mol. Biochem. Parasitol. 65:1994;123-133.
22. Cowman A.F., Morry M.J., Biggs B.A., Cross G.A.M., Foote S.J. Amino acid changes linked to pyrimethamine resistance in the dihydrofolate reductase-thymidylate synthase gene of Plasmodium falciparum. Proc. Natl. Acad. Sci. USA. 85:1988;9109-9113.
23. Coppel R.L. Repeat structures in a Plasmodium falciparum protein (MESA) that binds human erythrocyte protein 4.1. Mol. Biochem. Parasitol. 50:1992;335-347.
24. Stahl H.D., Crewther P.E., Anders R.F., Kemp D.J. Structure of the FIRA gene of Plasmodium falciparum. Mol. Biol. Med. 4:1987;199-211.
25. Smythe JA. Characterization of integral membrane protein antigens of Plasmodium falciparum. University of Melbourne. PhD Thesis, 1989.
26. Krishna S., Cowan G., Meade J.C., Wells R.A., Stringer J.R., Robson K.J. A family of cation ATPase-like molecules from Plasmodium falciparum. J. Cell. Biol. 120:1993;385-398.
27. Triglia T., Foote S.J., Kemp D.J., Cowman A.F. Amplification of the multidrug resistance gene pfmdr1 in Plasmodium falciparum has arisen as multiple independent events. Mol. Cell. Biol. 11:1991;5244-5250.