Characterization of the DNA polymerase loci of the novel porcine lymphotropic herpesviruses 1 and 2 in domestic and feral pigs

Journal of General Virology

Volumn 80, Issue 12, 1999, Pages 3199-3205

  Ulrich, Sven ^a   Goltz, Michael ^a   Ehlers, Bernhard ^a  

^a ROBERT KOCH INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; VIRUS ENZYME;

ANIMAL TISSUE; ARTICLE; BLOOD; HERPES VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; SPLEEN; SWINE; VIRUS GENE; VIRUS GENOME;

ALCELAPHINE HERPESVIRUS 1; ANIMALIA; DNA VIRUSES; GAMMAHERPESVIRINAE; HERPES; HERPESVIRUS 1; SUIDAE; SUS SCROFA; SUS SCROFA DOMESTICA;

EID: 0032747516     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-80-12-3199     Document Type: Article

References (40)

1. Albrecht, J. C., Nicholas, J., Biller, D., Cameron, K. R., Biesinger, B., Newman, C., Wittmann, S., Craxton, M. A., Coleman, H., Fleckenstein, B. & Honess, R. W. (1992). Primary structure of the herpesvirus saimiri genome. Journal of Virology 66, 5047-5058.
2. Allan, J. S., Broussard, S. R., Michaels, M. G., Starzl, T. E., Leighton, K. L., Whitehead, E. M., Comuzzie, A. G., Lanford, R. E., Leland, M. M., Switzer, W. M. & Heneine, W. (1998). Amplification of simian retroviral sequences from human recipients of baboon liver transplants. AIDS Research and Human Retroviruses 14, 821-824.
3. Blanco, L., Bernad, A., Blasco, M. A. & Salas, M. (1991). A general structure for DNA-dependent DNA polymerases. Gene 100, 27-38.
4. Breman, J. G., Kalisa-Ruti, Steniowski, M. V., Zanotto, E., Gromyko, A. I. & Arita, I. (1980). Human monkeypox, 1970-79. Bulletin of the World Health Organization 58, 165-182.
5. Britt, W. J. & Alford, C. A. (1996). Cytomegalovirus. In Fields Virology, 3rd edn, vol. 2, pp. 2493-2523. Edited by B. N. Fields, D. M. Knipe & P. M. Howley. Philadelphia: Lippincott-Raven.
6. Capua, I., Casaccia, C., Calzetta, G. & Caporale, V. (1997). Characterization of Aujeszky's disease viruses isolated from domestic animals and from a wild boar (Sus scrofa) in Italy between 1972 and 1995. Veterinary Microbiology 57, 143-149.
7. Ehlers, B., Borchers, K., Grund, C., Frölich, K., Ludwig, H. & Buhk, H.-J. (1999a). Detection of new DNA polymerase genes of known and potentially novel herpesviruses by PCR with degenerate and deoxyinosine-substituted primers. Virus Genes 18, 211-220.
8. Ehlers, B., Ulrich, S. & Goltz, M. (1999b). Detection of two novel porcine herpesviruses with high similarity to gammaherpesviruses. Journal of General Virology 80, 971-978.
9. Enserink, M. (1999). New virus fingered in Malaysian epidemic. Science 284, 407-410.
10. Ensser, A., Pflanz, R. & Fleckenstein, B. (1997). Primary structure of the alcelaphine herpesvirus 1 genome. Journal of Virology 71, 6517-6525.
11. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
12. Felsenstein, J. (1993). PHYLIP (phylogeny inference package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle, WA, USA.
13. Feranchak, A. P., Tyson, R. W., Narkewicz, M. R., Karrer, F. M. & Sokol, R. J. (1998). Fulminant Epstein-Barr viral hepatitis: orthotopic liver transplantation and review of the literature. Liver Transplantation and Surgery 4, 469-476.
14. Fishman, J. A. (1994). Miniature swine as organ donors for man: strategies for prevention of xenotransplant-associated infections. Xenotransplantation 1, 47-57.
15. Fishman, J. A. (1997). Xenosis and xenotransplantation: addressing the infectious risks posed by an emerging technology. Kidney International Supplementum 58, S41-S45.
16. Gao, F., Yue, L., White, A. T., Pappas, P. G., Barchue, J., Hanson, A. P., Greene, B. M., Sharp, P. M., Shaw, G. M. & Hahn, B. H. (1992). Human infection by genetically diverse SIVSM-related HIV-2 in west Africa. Nature 358, 495-499.
17. Gao, F., Bailes, E., Robertson, D. L., Chen, Y., Rodenburg, C. M., Michael, S. F., Cummins, L. B., Arthur, L. O., Peeters, M., Shaw, G. M., Sharp, P. M. & Hahn, B. H. (1999). Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes. Nature 397, 436-441.
18. Holmes, G. P., Chapman, L. E., Stewart, J. A., Straus, S. E., Hilliard, J. K. & Davenport, D. S. (1995). Guidelines for the prevention and treatment of B-virus infections in exposed persons. The B virus Working Group. Clinical Infectious Diseases 20, 421-439.
19. Honess, R. W., Gompels, U. A., Barrell, B. G., Craxton, M., Cameron, K. R., Staden, R., Chang, Y.-N. & Hayward, G. S. (1989). Deviations from expected frequencies of CpG dinucleotides in herpesvirus DNAs may be diagnostic of differences in the states of their latent genomes. Journal of General Virology 70, 837-855.
20. Hudnall, S. D., Rady, P. L, Tyring, S. K. & Fish, J. C. (1998). Serologic and molecular evidence of human herpesvirus 8 activation in renal transplant recipients. Journal of Infectious Diseases 178, 1791-1794.
21. Kadakia, M. P. (1998). Human herpesvirus 6 infection and associated pathogenesis following bone marrow transplantation. Leukemia & Lymphoma 31, 251-266.
22. Knopf, C. W. (1998). Evolution of viral DNA-dependent DNA polymerases. Virus Genes 16, 47-58.
23. Kocher, T. D., Thomas, W. K., Meyer, A., Edwards, S. V., Pææbo, S., Villablanca, F. X. & Wilson, A. C. (1989). Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences, USA 86, 6196-6200.
24. McGeoch, D. J., Cook, S., Dolan, A., Jamieson, F. E. & Telford, E. A. R. (1995). Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses. Journal of Molecular Biology 247, 443-458.
25. Martin, U., Kiessig, V., Blusch, J. H., Haverich, A., von der Helm, K., Herden, T. & Steinhoff, G. (1998). Expression of pig endogenous retrovirus by primary porcine endothelial cells and infection of human cells. Lancet 352, 692-694.
26. Michaels, M. G. (1997). Infectious concerns of cross-species transplantation: xenozoonoses. World Journal of Surgery 21, 968-974.
27. Moretti, T., Koons, B. & Budowle, B. (1998). Enhancement of PCR amplification yield and specificity using AmpliTaq Gold DNA polymerase. BioTechniques 25, 716-722.
28. Neipel, F., Albrecht, J.-C. & Fleckenstein, B. (1997). Cell-homologous genes in the Kaposi's sarcoma-associated rhadinovirus human herpesvirus 8: determinants of its pathogenicity? Journal of Virology 71, 4187-4192.
29. Neipel, F., Albrecht, J.-C. & Fleckenstein, B. (1998). Human herpesvirus 8 - the first human Rhadinovirus. Journal of the National Cancer Institute Monographs 23, 73-77.
30. Patience, C., Takeuchi, Y. & Weiss, R. A. (1997). Infection of human cells by an endogenous retrovirus of pigs. Nature Medicine 3, 282-286.
31. Reid, H. W. & Buxton, D. (1989). Malignant catarrhal fever and the Gammaherpesvirinae of Bovidae. In Herpesvirus Diseases of Cattle, Horses and Pigs, pp. 116-162. Edited by G. Wittmann. Boston: Kluwer.
32. Rovnak, J., Quackenbush, S. L., Reyes, R. A., Baines, J. D., Parrish, C. R. & Casey, J. W. (1998). Detection of a novel bovine lymphotropic herpesvirus. Journal of Virology 72, 4237-4242.
33. Searles, R. P., Bergquam, E. P., Axthelm, M. K. & Wong, S. W. (1999). Sequence and genomic analysis of a rhesus macaque rhadinovirus with similarity to Kaposi's sarcoma-associated herpesvirus/human herpesvirus 8. Journal of Virology 73, 3040-3053.
34. Siebert, P. D., Chenchik, A. & Kellogg, D. E. (1995). The Human GenomeWalker DNA Walking Kit: an improved method for walking in uncloned genomic DNA. CLONTECHniques X (II), 1-3.
35. Simas, J. P. & Efstathiou, S. (1998). Murine gammaherpesvirus 68: a model for the study of gammaherpesvirus pathogenesis. Trends in Microbiology 6, 276-282.
36. Springfeld, C., Tidona, C. A., Kehm, R., Bahr, U. & Darai, G. (1998). Identification and characterization of the Tupaia herpesvirus DNA polymerase gene. Journal of General Virology 79, 3049-3053.
37. Stadejek, T., Vilcek, S., Lowings, J. P., Ballagi-Pordany, A., Paton, D. J. & Belak, S. (1997). Genetic heterogeneity of classical swine fever virus in Central Europe. Virus Research 52, 195-204.
38. VanDevanter, D. R., Warrener, P., Bennett, L., Schultz, E. R., Coulter, S., Garber, R. L. & Rose, T. M. (1996). Detection and analysis of diverse herpesviral species by consensus primer PCR. Journal of Clinical Microbiology 34, 1666-1671.
39. Virgin, H. W., IV, Latreille, P., Wamsley, P., Hallsworth, K., Weck, K. E., Dal Canto, A. J. & Speck, S. H. (1997). Complete sequence and genomic analysis of murine gammaherpesvirus 68. Journal of Virology 71, 5894-5904.
40. Ye, Y., Niekrasz, M., Kosanke, S., Welsh, R., Jordan, H. E., Fox, J. C., Edwards, W. C., Maxwell, C. & Cooper, D. K. C. (1994). The pig as a potential organ donor for man. A study of potentially transferable disease from donor pig to recipient man. Transplantation 57, 694-703.