Distinct domains of hTAF(II)100 are required for functional interaction with transcription factor TFIIFβ (RAP30) and incorporation into the TFIID complex

EMBO Journal

Volumn 15, Issue 14, 1996, Pages 3702-3712

  Dubrovskaya, Veronika ^a,b   Lavigne, Anne Claire ^a   Davidson, Irwin ^a   Acker, Joël ^a   Staub, Adrien ^a   Tora, Laszlo ^a  

^a INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

^b Dartmouth College   (United States)

Author keywords

Basal RNA polymerase II transcription; dTAF(II)80; TBP; WD repeats; yTAF(II)90

Indexed keywords

RNA POLYMERASE II; TATA BINDING PROTEIN; TRANSCRIPTION FACTOR; DNA BINDING PROTEIN; MONOCLONAL ANTIBODY; PRIMER DNA; TAF2D PROTEIN, HUMAN; TATA BINDING PROTEIN ASSOCIATED FACTOR; TRANSCRIPTION FACTOR II; TRANSCRIPTION FACTOR IID; TRANSCRIPTION FACTOR TFIIF;

ANIMAL CELL; ANIMAL EXPERIMENT; ARTICLE; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; DROSOPHILA; HUMAN; HUMAN CELL; INTRACEREBROVENTRICULAR DRUG ADMINISTRATION; MOLECULAR INTERACTION; MOUSE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN DOMAIN; SEQUENCE HOMOLOGY; YEAST; AMINO ACID SEQUENCE; ANIMAL; ARMYWORM; BINDING SITE; CELL LINE; CHEMICAL STRUCTURE; CHEMISTRY; CYTOLOGY; GENETICS; HELA CELL; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROTEIN BINDING;

ANIMALIA;

AMINO ACID SEQUENCE; ANIMALS; ANTIBODIES, MONOCLONAL; BASE SEQUENCE; BINDING SITES; CELL LINE; CLONING, MOLECULAR; DNA PRIMERS; DNA-BINDING PROTEINS; HELA CELLS; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; SEQUENCE HOMOLOGY, AMINO ACID; SPODOPTERA; TATA-BINDING PROTEIN ASSOCIATED FACTORS; TRANSCRIPTION FACTOR TFIID; TRANSCRIPTION FACTORS; TRANSCRIPTION FACTORS, TFII;

EID: 0029982356     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1002/j.1460-2075.1996.tb00740.x     Document Type: Article

References (50)

1. Aso, T., Serizawa, H., Conaway, R.C. and Conaway, J.W. (1994) A TATA sequence dependent transcriptional repressor activity associated with mammalian transcription factor IIA. EMBO J., 13, 435-445.
2. Belyaev, A.S. and Roy, P. (1993) Development of baculovirus triple and quadruple expression vectors: co-expression of three or four bluetongue virus proteins and the synthesis of bluetongue virus-like particles in insect cells. Nucleic Acids Res., 21, 1219-1223.
3. Brou, C., Chaudhary, S., Davidson, I., Lutz, Y., Wu, J., Egly, J.M., Tora, L. and Chambon, P. (1993a) Distinct TFIID complexes mediate the effect of different transcriptional activators. EMBO J., 12, 489-499.
4. Brou, C., Kuhn, A., Staub, A., Chaudhary, S., Grummt, I., Davidson, I. and Tora, L. (1993b) Sequence-specific transactivators counteract topoisomerase II-mediated inhibition of in vitro transcription by RNA polymerase I and II. Nucleic Acids Res., 21, 4011-4018.
5. Brou, C., Wu, J., Ali, S., Scheer, E., Lang, C., Davidson, I., Chambon, P. and Tora, L. (1993c) Different TBP-associated factors are required for mediating the stimulation of transcription in vitro by the acidic transactivator GAL-VP16 and the two nonacidic activation functions of the estrogen receptor. Nucleic Acids Res., 21, 5-12.
6. Buratowski, S., Hahn, S., Guarente, L. and Sharp, P.A. (1989) Five intermediate complexes in transcription initiation by RNA polymerase II. Cell, 56, 549-561.
7. Chalut, C., Lang, C. and Egly, J.M. (1994) Expression in Escherichia coli: production and purification of both subunits of the human general transcription factor TFIIE. Protein Expression Purif., 5, 458-467.
8. Chiang, C.M. and Roeder, R.G. (1995) Cloning of an intrinsic human TFIID subunit that interacts with multiple transcriptional activators. Science, 267, 531-536.
9. Chiang, C.M., Ge, H., Wang, Z., Hoffmann, A. and Roeder, R.G. (1993) Unique TATA-binding protein-containing complexes and cofactors involved in transcription by RNA polymerases II and III. EMBO J., 12, 2749-2762.
10. Dynlacht, B.D., Weinzierl, R.O., Admon, A. and Tjian, R. (1993) The dTAFII80 subunit of Drosophila TFIID contains beta-transducin repeats. Nature, 363, 176-179.
11. Eberhard, D., Tora, L., Egly, J.-M. and Grummt, I. (1993) A TBP-containing multiprotein complex (TIF-IB) mediates transcription specificity of murine RNA polymerase 1. Nucleic Acids Res., 21, 4180-4186.
12. Fong, H.K., Hurley, J.B., Hopkins, R.S., Miake-Lye, R., Johnson, M.S., Doolittle, R.F. and Simon, M.I. (1986) Repetitive segmental structure of the transducin beta subunit: homology with the CDC4 gene and identification of related mRNAs. Proc. Natl Acad. Sci. USA, 83, 2162-2166.
13. Gill, G., Pascal, E., Tseng, Z.H. and Tjian, R. (1994) A glutamine-rich hydrophobic patch in transcription factor Sp1 contacts the dTAFII110 component of the Drosophila TFIlD complex and mediates transcriptional activation. Proc. Natl Acad. Sci. USA, 91, 2-6.
14. Goodrich, J.A., Hoey, T., Thut, C.J., Admon, A. and Tjian, R. (1993) Drosophila TAFII40 interacts with both a VP16 activation domain and the basal transcription factor TFIIB. Cell, 75, 5-30.
15. Hansen, S.K. and Tjian, R. (1995) TAFs and TFIIA mediate differential utilization of the tandem Adh promoters. Cell, 82, 565-575.
16. II80 with other TAFs and with general transcription factors. Proc. Natl Acad. Sci. USA, 92, 8195-8199.
17. Hoey, T., Weinzierl, R.O., Gill, G., Chen, J.L., Dynlacht, B.D. and Tjian, R. (1993) Molecular cloning and functional analysis of Drosophila TAF110 reveal properties expected of coactivators. Cell, 72, 247-260.
18. Jacq, X., Brou, C., Lutz, Y., Davidson, I., Chambon, P. and Tora, L. (1994) Human TAFII30 is present in a distinct TFIID complex and is required for transcriptional activation by the estrogen receptor. Cell, 79, 107-117.
19. Klemm, R.D., Goodrich, J.A., Zhou, S. and Tjian, R. (1995) Molecular cloning and expression of the 32-kDa subunit of human TFIID reveals interactions with VP16 and TFIIB that mediate transcriptional activation. Proc. Natl Acad. Sci. USA, 92, 5788-5792.
20. Kokubo, T., Gong, D.W., Yamashita, S., Horikoshi, M., Roeder, R.G. and Nakatani, Y. (1993a) Drosophila 230-kD TFIID subunit, a functional homolog of the human cell cycle gene product, negatively regulates DNA binding of the TATA box-binding subunit of TFIID. Genes Dev., 7, 1033-1046.
21. Kokubo, T., Gong, D.W., Yamashita, S., Takada, R., Roeder, R.G., Horikoshi, M. and Nakatani, Y. (1993b) Molecular cloning, expression and characterization of the Drosophila 85-kilodalton TFIID subunit. Mol. Cell Biol., 13, 7859-7863.
22. II55 and the TATA binding protein. J. Biol. Chem., in press.
23. Lu, H. and Levine, A.J. (1995) Human TAFII31 protein is a transcriptional coactivator of the p53 protein. Proc. Natl Acad. Sci. USA, 92, 5154-5158.
24. Maldonado, E., Ha, I., Cortes, P., Weis, L. and Reinberg, D. (1990) Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID and IIB during formation of a transcription-competent complex. Mol. Cell Biol., 10, 6335-6347.
25. Mengus, G., May, M., Jacq, X., Staub, A., Tora, L., Chambon, P. and Davidson, I. (1995) Cloning and characterization of hTAFII18, hTAFII20 and hTAFII28: three subunits of the human transcription factor TFIID. EMBO J., 14, 1520-1531.
26. Moncollin, V., Schaeffer, L., Chalut, C. and Egly, J.M. (1992) Expression in Escherichia coli: purification and properties of the recombinant human general transcription factor rTFIIB. Protein Expression Purif., 3, 374-379.
27. Neer, E.J., Schmidt, C.J., Nambudripad, R. and Smith, T.F. (1994) The ancient regulatory-protein family of WD-repeat proteins. Nature, 371, 297-300.
28. O'Reilly, D.R., Miller, L.K. and Luckow, V.A. (1992) Baculovirus Expression Vectors. W.H. Freeman, New York.
29. Parvin, J.D., Shykind, B.M., Meyers, R.E., Kim, J. and Sharp, P.A. (1994) Multiple sets of basal factors initiate transcription by RNA polymerase II. J. Biol. Chem., 269, 18414-18421.
30. Pugh, B.F. and Tjian, R. (1991) Transcription from a TATA-less promoter requires a multisubunit TFIID complex. Genes Dev., 5, 35-45.
31. Pugh, B.F. and Tjian, R. (1992) Diverse transcriptional functions of the multisubunit eukaryotic TFIID complex. J. Biol. Chem., 267, 679-682.
32. Reese, J.C., Apone, L., Walker, S.S., Griffin, L.A. and Green, M.R. (1994) Yeast TAFIIS in a multisubunit complex required for activated transcription. Nature, 371, 523-527.
33. Roeder, R.G. (1991) The complexities of eukaryotic transcription initiation: regulation of preinitiation complex assembly. Trends Biochem. Sci., 16, 402-408.
34. Rost, B. and Sander, C. (1993) Improved prediction of protein secondary structure by use of sequence profiles and neural networks. Proc. Natl Acad. Sci. USA, 90, 7558-7562.
35. Rost, B., Sander, C. and Schneider, R. (1994) PHD - an automatic mail server for protein secondary structure prediction. Comput. Applic. Biosci., 10, 53-60.
36. Rudloff, U., Stunnenberg, H.G., Keaveney, M. and Grummt, I. (1994) Yeast TBP can replace its human homologue in the RNA polymerase I-specitic multisubunit factor SL1. J. Mol. Biol., 243, 840-845.
37. Ruppert, S., Wang, E.H. and Tjian, R. (1993) Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation. Nature, 362, 175-179.
38. Serizawa, H., Conaway, J.W. and Conaway, R.C. (1994) Transcriptional initiation by mammalian RNA polymerase II. In Conaway, R.C. and Conaway, J.W. (eds), Transcription Mechanisms and Regulation. Raven Press, New York, pp. 27-13.
39. Sopta, M., Burton, Z.F. and Greenblatt, J. (1989) Structure and associated DNA-helicase activity of a general transcription initiation factor that binds to RNA polymerase II. Nature, 341, 410-414.
40. Sun, X., Ma, D., Sheldon, M., Yeung, K. and Reinberg, D. (1994) Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription. Genes Dev., 8, 2336-2348.
41. Tanese, N., Pugh, B.F. and Tjian, R. (1991) Coactivators for a proline-rich activator purified from the multisubunit human TFIID complex. Genes Dev., 5, 2212-2224.
42. Tasset, D., Tora, L., Fromental, C., Scheer, E. and Chambon, P. (1990) Distinct classes of transcriptional activating domains function by different mechanisms. Cell, 62, 1177-1187.
43. Thut, C.J., Chen, J.L., Klemm, R. and Tjian, R. (1995) p53 transcriptional activation mediated by coactivators TAFII40 and TAFII60. Science, 267, 100-104.
44. Timmers, H.T., Meyers, R.E. and Sharp, P.A. (1992) Composition of transcription factor B-TFIID. Proc. Natl Acad. Sci. USA, 89, 8140-8144.
45. Tjian, R. (1995) Molecular machines that control genes. Sci. Am., 272, 54-61.
46. Tora, L., White, J., Brou, C., Tasset, D., Webster, N., Scheer, E. and Chambon, P. (1989) The human estrogen receptor has two independent nonacidic transcriptional activation functions. Cell, 59, 477-487.
47. Xiao, J.H., Davidson, I., Matthes, H., Garnier, J.M. and Chambon, P. (1991) Cloning, expression and transcriptional properties of the human enhancer factor TEF-1. Cell, 65, 551-568.
48. II30b: two small subunits of Drosophila TFIID. Genes Dev., 7, 2587-2597.
49. Zawel, L. and Reinberg, D. (1995) Common themes in assembly and function of eukaryotic transciption complexes. Annu. Rev. Biochem., 64, 533-561.
50. Zhou, Q., Lieberman, P.M, Boyer, T.G. and Berk, A.J. (1992) Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter. Genes Dev., 6, 64-74.