메뉴 건너뛰기




Volumn 207, Issue 2, 1998, Pages 197-207

Protein SRP54 of human signal recognition particle: Cloning, expression, and comparative analysis of functional sites

Author keywords

Protein secretion; Protein targeting; RNA protein interactions; Signal peptide

Indexed keywords

DOCKING PROTEIN; PROLACTIN; RNA BINDING PROTEIN; SIGNAL PEPTIDE;

EID: 0032579343     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(97)00627-6     Document Type: Article
Times cited : (15)

References (38)
  • 1
    • 0022484922 scopus 로고
    • Prediction of protein structure
    • Argos P., Rao M. Prediction of protein structure. Meth. Enzymol. 130:1976;185-207.
    • (1976) Meth. Enzymol. , vol.130 , pp. 185-207
    • Argos, P.1    Rao, M.2
  • 2
    • 0020484234 scopus 로고
    • Structural prediction of membrane-bound proteins
    • Argos P., Rao J., Hargrave P. Structural prediction of membrane-bound proteins. Eur. J. Biochem. 128:1982;565-575.
    • (1982) Eur. J. Biochem. , vol.128 , pp. 565-575
    • Argos, P.1    Rao, J.2    Hargrave, P.3
  • 3
    • 0029963973 scopus 로고    scopus 로고
    • Regulation by the ribosome of the GTPase of the signal-recognition particle during protein targeting
    • Bacher G., Lütcke H., Jungnickel B., Rapoport T.A., Dobberstein B. Regulation by the ribosome of the GTPase of the signal-recognition particle during protein targeting. Nature. 381:1996;248-251.
    • (1996) Nature , vol.381 , pp. 248-251
    • Bacher, G.1    Lütcke, H.2    Jungnickel, B.3    Rapoport, T.A.4    Dobberstein, B.5
  • 5
    • 0024966540 scopus 로고
    • Model for signal sequence recognition from amino-acid sequence of 54 K subunit of signal recognition particle
    • Bernstein H.D., Poritz M.A., Strub K., Hoben P.J., Brenner S., Walter P. Model for signal sequence recognition from amino-acid sequence of 54 K subunit of signal recognition particle. Nature. 340:1989;482-486.
    • (1989) Nature , vol.340 , pp. 482-486
    • Bernstein, H.D.1    Poritz, M.A.2    Strub, K.3    Hoben, P.J.4    Brenner, S.5    Walter, P.6
  • 6
    • 0000085211 scopus 로고
    • MSEQ: A microcomputer-based approach to the analysis, display, and prediction of protein structure
    • Black S., Glorioso J. MSEQ: A microcomputer-based approach to the analysis, display, and prediction of protein structure. Biotechniques. 4:1986;448-460.
    • (1986) Biotechniques , vol.4 , pp. 448-460
    • Black, S.1    Glorioso, J.2
  • 7
    • 0028129127 scopus 로고
    • Subunits of the Saccharomyces cerevisiae signal recognition particle required for its functional expression
    • Brown J.D., Hann B.C., Medzihradszky K.F., Niwa M., Burlingame A.L., Walter P. Subunits of the Saccharomyces cerevisiae signal recognition particle required for its functional expression. EMBO J. 13:1994;4390-4400.
    • (1994) EMBO J. , vol.13 , pp. 4390-4400
    • Brown, J.D.1    Hann, B.C.2    Medzihradszky, K.F.3    Niwa, M.4    Burlingame, A.L.5    Walter, P.6
  • 8
    • 0028579523 scopus 로고
    • A structure for the signal sequence binding protein SRP54: 3D reconstruction from STEM images of single molecules
    • Czarnota G.J., Andrews D.W., Farrow N.A., Ottensmeyer F.P. A structure for the signal sequence binding protein SRP54: 3D reconstruction from STEM images of single molecules. J. Struct. Biol. 113:1994;35-46.
    • (1994) J. Struct. Biol. , vol.113 , pp. 35-46
    • Czarnota, G.J.1    Andrews, D.W.2    Farrow, N.A.3    Ottensmeyer, F.P.4
  • 9
    • 0031017523 scopus 로고    scopus 로고
    • Structure of the conserved GTPase domain of the signal recognition particle
    • Freymann D., Keenan R., Stroud R., Walter P. Structure of the conserved GTPase domain of the signal recognition particle. Nature. 385:1997;361-364.
    • (1997) Nature , vol.385 , pp. 361-364
    • Freymann, D.1    Keenan, R.2    Stroud, R.3    Walter, P.4
  • 10
    • 0026038363 scopus 로고
    • Transcription of full-length and truncated mRNA transcripts to study protein translocation across the endoplasmic reticulum
    • Gilmore R., Collins P., Johnson J., Kellaris K., Rapiejko P. Transcription of full-length and truncated mRNA transcripts to study protein translocation across the endoplasmic reticulum. Meth. Cell Biol. 34:1991;223-239.
    • (1991) Meth. Cell Biol. , vol.34 , pp. 223-239
    • Gilmore, R.1    Collins, P.2    Johnson, J.3    Kellaris, K.4    Rapiejko, P.5
  • 11
    • 0025986155 scopus 로고
    • Probing the molecular environment of translocating polypeptide chains by cross-linking
    • Görlich D., Kurzchalia T.V., Wiedmann M., Rapoport T.A. Probing the molecular environment of translocating polypeptide chains by cross-linking. Meth. Cell Biol. 34:1991;241-262.
    • (1991) Meth. Cell Biol. , vol.34 , pp. 241-262
    • Görlich, D.1    Kurzchalia, T.V.2    Wiedmann, M.3    Rapoport, T.A.4
  • 12
    • 0030736479 scopus 로고    scopus 로고
    • Binding site of the M-domain of human protein SRP 54 determined by systematic site directed mutagenesis of signal recognition particle RNA
    • Gowda K., Chittenden K., Zwieb C. Binding site of the M-domain of human protein SRP 54 determined by systematic site directed mutagenesis of signal recognition particle RNA. Nucl. Acids Res. 25:1997;388-394.
    • (1997) Nucl. Acids Res. , vol.25 , pp. 388-394
    • Gowda, K.1    Chittenden, K.2    Zwieb, C.3
  • 13
    • 0021004695 scopus 로고
    • Preparation and use of nuclease-treated rabbit reticulocyte lysates for the translation of eukaryotic messenger RNA
    • Jackson R.J., Hunt T. Preparation and use of nuclease-treated rabbit reticulocyte lysates for the translation of eukaryotic messenger RNA. Meth. Enzymol. 96:1983;50-74.
    • (1983) Meth. Enzymol. , vol.96 , pp. 50-74
    • Jackson, R.J.1    Hunt, T.2
  • 14
    • 0025334980 scopus 로고
    • Improvements in protein secondary structure prediction by an enhanced neural network
    • Kneller D., Cohen F., Langridge R. Improvements in protein secondary structure prediction by an enhanced neural network. J. Mol. Biol. 214:1990;171-182.
    • (1990) J. Mol. Biol. , vol.214 , pp. 171-182
    • Kneller, D.1    Cohen, F.2    Langridge, R.3
  • 15
    • 15844397001 scopus 로고    scopus 로고
    • Identification of a region of Bacillus subtilis Ffh, a homologue of mammalian SRP54 protein, that is essential for binding to small cytoplasmic RNA
    • Kurita K., Honda K., Suzuma S., Takamatsu H., Nakamura K., Yamane K. Identification of a region of Bacillus subtilis Ffh, a homologue of mammalian SRP54 protein, that is essential for binding to small cytoplasmic RNA. J. Biol. Chem. 271:1996;13140-13146.
    • (1996) J. Biol. Chem. , vol.271 , pp. 13140-13146
    • Kurita, K.1    Honda, K.2    Suzuma, S.3    Takamatsu, H.4    Nakamura, K.5    Yamane, K.6
  • 16
    • 0028849804 scopus 로고
    • The intrinsic ability of ribosomes to bind to endoplasmic reticulum membranes is regulated by signal recognition particle and nascent-polypeptide-associated complex
    • Lauring B., Kreibich G., Wiedmann M. The intrinsic ability of ribosomes to bind to endoplasmic reticulum membranes is regulated by signal recognition particle and nascent-polypeptide-associated complex. Proc. Natl. Acad. Sci. USA. 92:1995;9435-9439.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 9435-9439
    • Lauring, B.1    Kreibich, G.2    Wiedmann, M.3
  • 18
    • 0028284220 scopus 로고
    • Mammalian and Escherichia coli signal recognition particles
    • Luirink J., Dobberstein B. Mammalian and Escherichia coli signal recognition particles. Mol. Microbiol. 11:1994;9-13.
    • (1994) Mol. Microbiol. , vol.11 , pp. 9-13
    • Luirink, J.1    Dobberstein, B.2
  • 19
    • 0028964746 scopus 로고
    • Signal recognition particle (SRP), a ubiquitous initiator of protein translocation
    • Lütcke H. Signal recognition particle (SRP), a ubiquitous initiator of protein translocation. Eur. J. Biochem. 228:1995;531-550.
    • (1995) Eur. J. Biochem. , vol.228 , pp. 531-550
    • Lütcke, H.1
  • 21
    • 0024400708 scopus 로고
    • Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP-binding domains
    • Römisch K., Webb J., Herz J., Prehn S., Frank R., Vingron M., Dobberstein B. Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP-binding domains. Nature. 340:1989;478-482.
    • (1989) Nature , vol.340 , pp. 478-482
    • Römisch, K.1    Webb, J.2    Herz, J.3    Prehn, S.4    Frank, R.5    Vingron, M.6    Dobberstein, B.7
  • 22
    • 0025012428 scopus 로고
    • The 54-kD protein of signal recognition particle contains a methionine-rich RNA binding domain
    • Römisch K., Webb J., Lingelbach K., Gausepohl H., Dobberstein B. The 54-kD protein of signal recognition particle contains a methionine-rich RNA binding domain. J. Cell Biol. 111:1990;1793-1802.
    • (1990) J. Cell Biol. , vol.111 , pp. 1793-1802
    • Römisch, K.1    Webb, J.2    Lingelbach, K.3    Gausepohl, H.4    Dobberstein, B.5
  • 23
    • 0028300741 scopus 로고
    • Combining evolutionary information and neural networks to predict protein secondary structure
    • Rost B., Sander C. Combining evolutionary information and neural networks to predict protein secondary structure. Proteins. 19:1994;55-72.
    • (1994) Proteins , vol.19 , pp. 55-72
    • Rost, B.1    Sander, C.2
  • 25
    • 0026440520 scopus 로고
    • A Mycoplasma protein homologous to mammalian SRP54 recognizes a highly conserved domain of SRP RNA
    • Samuelsson T. A Mycoplasma protein homologous to mammalian SRP54 recognizes a highly conserved domain of SRP RNA. Nucl. Acids Res. 20:1992;5763-5770.
    • (1992) Nucl. Acids Res. , vol.20 , pp. 5763-5770
    • Samuelsson, T.1
  • 26
    • 0027477526 scopus 로고
    • Structural analysis based on state-space modeling
    • Stultz C., White J., Smith T. Structural analysis based on state-space modeling. Prot. Sci. 2:1993;305-314.
    • (1993) Prot. Sci. , vol.2 , pp. 305-314
    • Stultz, C.1    White, J.2    Smith, T.3
  • 27
    • 0029083371 scopus 로고
    • Cooperative assembly of signal recognition particle RNA with protein SRP19
    • Walker P., Black S., Zwieb C. Cooperative assembly of signal recognition particle RNA with protein SRP19. Biochemistry. 34:1995;11989-11997.
    • (1995) Biochemistry , vol.34 , pp. 11989-11997
    • Walker, P.1    Black, S.2    Zwieb, C.3
  • 28
    • 0019817924 scopus 로고
    • Translocation of proteins across the endoplasmic reticulum II. Signal recognition protein (SRP) mediates the selective binding to microsomal membranes of in-vitro-assembled polysomes synthesizing secretory protein
    • Walter P., Blobel G. Translocation of proteins across the endoplasmic reticulum II. Signal recognition protein (SRP) mediates the selective binding to microsomal membranes of in-vitro-assembled polysomes synthesizing secretory protein. J. Cell Biol. 91:1981;551-556.
    • (1981) J. Cell Biol. , vol.91 , pp. 551-556
    • Walter, P.1    Blobel, G.2
  • 29
    • 0019822645 scopus 로고
    • Translocation of proteins across the endoplasmic reticulum III. Signal recognition protein (SRP) causes signal sequence-dependent and site-specific arrest of chain elongation that is released by microsomal membranes
    • Walter P., Blobel G. Translocation of proteins across the endoplasmic reticulum III. Signal recognition protein (SRP) causes signal sequence-dependent and site-specific arrest of chain elongation that is released by microsomal membranes. J. Cell Biol. 91:1981;557-561.
    • (1981) J. Cell Biol. , vol.91 , pp. 557-561
    • Walter, P.1    Blobel, G.2
  • 30
    • 0020825185 scopus 로고
    • Disassembly and reconstitution of the signal recognition particle
    • Walter P., Blobel G. Disassembly and reconstitution of the signal recognition particle. Cell. 34:1983;525-533.
    • (1983) Cell , vol.34 , pp. 525-533
    • Walter, P.1    Blobel, G.2
  • 31
    • 0019849075 scopus 로고
    • Translocation of proteins across the endoplasmic reticulum: Signal recognition protein (SRP) binds to in-vitro assembled polysomes synthesizing secretory protein
    • Walter P., Ibrahimi I., Blobel G. Translocation of proteins across the endoplasmic reticulum: signal recognition protein (SRP) binds to in-vitro assembled polysomes synthesizing secretory protein. J. Cell Biol. 91:1981;545-550.
    • (1981) J. Cell Biol. , vol.91 , pp. 545-550
    • Walter, P.1    Ibrahimi, I.2    Blobel, G.3
  • 32
    • 0028181528 scopus 로고
    • Protein classification by stochastic modeling and optimal filtering of amino-acid sequences
    • White J., Stultz C., Smith T. Protein classification by stochastic modeling and optimal filtering of amino-acid sequences. Math. Biosci. 119:1994;35-75.
    • (1994) Math. Biosci. , vol.119 , pp. 35-75
    • White, J.1    Stultz, C.2    Smith, T.3
  • 33
    • 0025601549 scopus 로고
    • The methionine-rich domain of the 54 kDa protein subunit of the signal recognition particle contains an RNA binding site and can be crosslinked to a signal sequence
    • Zopf D., Bernstein H.D., Johnson A.E., Walter P. The methionine-rich domain of the 54 kDa protein subunit of the signal recognition particle contains an RNA binding site and can be crosslinked to a signal sequence. EMBO J. 9:1990;4511-4517.
    • (1990) EMBO J. , vol.9 , pp. 4511-4517
    • Zopf, D.1    Bernstein, H.D.2    Johnson, A.E.3    Walter, P.4
  • 34
    • 0027397490 scopus 로고
    • GTPase domain of the 54-kD subunit of the mammalian signal recognition particle is required for protein translocation but not for signal sequence binding
    • Zopf D., Bernstein H.D., Walter P. GTPase domain of the 54-kD subunit of the mammalian signal recognition particle is required for protein translocation but not for signal sequence binding. J. Cell Biol. 120:1993;1113-1121.
    • (1993) J. Cell Biol. , vol.120 , pp. 1113-1121
    • Zopf, D.1    Bernstein, H.D.2    Walter, P.3
  • 35
    • 0024368074 scopus 로고
    • Structure and function of signal recognition particle RNA
    • Zwieb C. Structure and function of signal recognition particle RNA. Prog. Nucl. Acids Res. Mol. Biol. 37:1989;207-234.
    • (1989) Prog. Nucl. Acids Res. Mol. Biol. , vol.37 , pp. 207-234
    • Zwieb, C.1
  • 36
    • 0025765510 scopus 로고
    • Interaction of protein SRP19 with signal recognition particle RNA lacking individual RNA helices
    • Zwieb C. Interaction of protein SRP19 with signal recognition particle RNA lacking individual RNA helices. Nucl. Acids Res. 19:1991;2955-2960.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 2955-2960
    • Zwieb, C.1
  • 37
    • 0030762741 scopus 로고    scopus 로고
    • The signal recognition particle database (SRPDB)
    • Zwieb C., Larsen N. The signal recognition particle database (SRPDB). Nucl. Acids Res. 25:1997;107-108.
    • (1997) Nucl. Acids Res. , vol.25 , pp. 107-108
    • Zwieb, C.1    Larsen, N.2
  • 38
    • 0023046805 scopus 로고
    • Identification of dynamic sequences in the central domain of 7SL RNA
    • Zwieb C., Ullu E. Identification of dynamic sequences in the central domain of 7SL RNA. Nucl. Acids Res. 14:1986;4639-4657.
    • (1986) Nucl. Acids Res. , vol.14 , pp. 4639-4657
    • Zwieb, C.1    Ullu, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.