Binding site of the M-domain of human protein SRP54 determined by systematic site-directed mutagenesis of signal recognition particle RNA

Nucleic Acids Research

Volumn 25, Issue 2, 1997, Pages 388-394

  Gowda, Krishne ^a   Chittenden, Kimberly ^a   Zwieb, Christian ^a  

^a UNIVERSITY OF TEXAS AT TYLER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

SIGNAL RECOGNITION PARTICLE;

ARTICLE; BINDING AFFINITY; BINDING SITE; HUMAN; PRIORITY JOURNAL; PROTEIN RNA BINDING; SITE DIRECTED MUTAGENESIS;

BASE SEQUENCE; BINDING SITES; CLONING, MOLECULAR; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; GENE EXPRESSION; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; MUTATION; NUCLEIC ACID CONFORMATION; RECOMBINANT PROTEINS; RNA; RNA-BINDING PROTEINS; SIGNAL RECOGNITION PARTICLE;

BACTERIA (MICROORGANISMS); EUKARYOTA;

EID: 0030736479     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.2.388     Document Type: Article

References (34)

1. Lütcke, H. (1995) Eur. J. Biochem., 228, 531-550.
2. Poritz, M. A., Bernstein, H. D., Strub, K., Zopf, D., Wilhelm, H. and Walter, P. (1990) Science, 250, 1111-1117.
3. Ribes, V., Römisch, K., Giner, A., Dobberstein, B. and Tollervey, D. (1990) Cell, 63, 591-600.
4. Bernstein, H. D., Poritz, M. A., Strub, K., Hoben, P. J., Brenner, S. and Walter, P. (1989) Nature, 340, 482-486.
5. Römisch, K., Webb, J., Herz, J., Prehn, S., Frank, R., Vingron, M. and Dobberstein, B. (1989) Nature, 340, 478-82.
6. Walter, P. and Blobel, G. (1983) Cell, 34, 525-533.
7. Larsen, N. and Zwieb, C. (1996) Nucleic Acids Res., 24, 80-81.
8. Krieg, U., Walter, P. and Johnson, A. (1986) Proc. Natl. Acad. Sci. USA, 83, 8604-8608.
9. Kurzchalia, T., Wiedman, M., Girshovich, A., Bochkareva, E., Bielka, H. and Rapoport, T. (1986) Nature, 320, 634-636.
10. Zopf, D., Bernstein, H. D., Johnson, A. E. and Walter, P. (1990) EMBO J., 9, 4511-4517.
11. Römisch, K., Webb, J., Lingelbach, K., Gausepohl, H. and Dobberstein, B. (1990) J. Cell Biol., 111, 1793-1802.
12. Lütcke, H., High, S., Römisch, K., Ashford, A. J. and Dobberstein, B. (1992) EMBO J., 11, 1543-1551.
13. Andrews, D., Walter, P. and Ottensmeyer, P. (1987) EMBO J., 6, 3471-3477.
14. Siegel, V. and Walter, P. (1988) Proc. Natl. Acad. Sci. USA, 85, 1801-1805.
15. Zwieb, C. (1985) Nucleic Acids Res., 13, 6105-6124.
16. Zwieb, C. and Ullu, E. (1986) Nucleic Acids Res., 14, 4639-4657.
17. Zwieb, C. (1991) Nucleic Acids Res., 19, 2955-2960.
18. Maniatis, T., Fritsch, E. and Sambrook, J. (1982) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
19. Studier, F. W., Rosenberg, A. H., Dunn, J. J. and Dubendorff, J. W. (1990) Methods Enzymol., 185, 60-89.
20. Dagert, M. and Ehrlich, S. (1979) Gene, 6, 23-28.
21. Bradford, M. (1976) Anal. Biochem., 72, 248-254.
22. Walker, P., Black, S. and Zwieb, C. (1995) Biochemistry, 34, 11989-11997.
23. Rasband, W. (1994) The NIH Image program is in the public domain and available by Anonymous FTP from zippy.nimh.nih.gov.
24. Nelson, R. M. and Long, G. L. (1989) Anal. Biochem., 180, 147-151.
25. Zwieb, C. (1992) J. Biol. Chem., 267, 15650-15656.
26. Butler, E. and Chamberlin, M. (1982) J. Biol. Chem., 257, 5772-5778.
27. Zwieb, C., Müller, F. and Larsen, N. (1996) Folding & Design, 1, 315-324.
28. Bernstein, F., Koetzle, T., Williams, G., Meyer EF, J., Brice, M., Rodgers, J., Kennard, O., Shimanouchi, T. and Tasumi, M. (1977) J. Mol. Biol., 112, 535-542.
29. Massire, C., Gaspin, C. and Westhof, E. (1994) J. Mol. Graphics, 12, 201-206.
30. Larsen, N. and Zwieb, C. (1991) Nucleic Acids Res., 19, 209-215.
31. Lentzen, G., Moine, H., Ehresmann, C., Ehresmann, B. and Wintermeyer, W. (1996) RNA, 2, 244-253.
32. Samuelsson, T. (1992) Nucleic Acids Res., 20, 5763-5770.
33. Hauser, S., Bacher, G., Dobberstein, B. and Lütcke, H. (1995) EMBO J., 14, 5485-5493.
34. Gundelfinger, E. D., Krause, E., Melli, M. and Dobberstein, B. (1983) Nucleic Acids Res., 11, 7363-7374.