FKBP-type peptidyl-prolyl cis-trans isomerase from a sulfur-dependent hyperthermophilic archaeon, Thermococcus sp. KS-1

Gene

Volumn 222, Issue 2, 1998, Pages 249-255

  Iida, Toshii ^a   Furutani, Masahiro ^a   Nishida, Fumiko ^b   Maruyama, Tadashi ^a  

^a MARINE BIOTECHNOLOGY INSTITUTE   (Japan)

^b Shimizu Laboratories   (Japan)

Author keywords

FKBP; Gene cloning; Hyperthermophilic archaeon; Peptidyl prolyl cis trans isomerase

Indexed keywords

CYCLOPHILIN; CYCLOSPORIN A; DNA; FK 506 BINDING PROTEIN; IMMUNOSUPPRESSIVE AGENT; RECOMBINANT ENZYME; TACROLIMUS;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; DNA SEQUENCE; ENZYME PURIFICATION; ESCHERICHIA COLI; GENE EXPRESSION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; THERMOCOCCUS; THERMOPHILIC BACTERIUM;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; CYCLOPHILINS; DNA PRIMERS; DNA, ARCHAEAL; ESCHERICHIA COLI; GENE EXPRESSION; GENES, ARCHAEAL; HUMANS; IMMUNOPHILINS; MOLECULAR SEQUENCE DATA; PEPTIDYLPROLYL ISOMERASE; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY, AMINO ACID; TACROLIMUS BINDING PROTEINS; THERMOCOCCUS;

ARCHAEA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; THERMOCOCCUS; THERMOCOCCUS SP.; THERMOCOCCUS SP. KS-1;

EID: 0032548180     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(98)00484-3     Document Type: Article

References (28)

1. Bult C.J.et al. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science. 273:1996;1058-1073.
2. Callebaut I., Mornon J.-P. Trigger factor, one of the Escherichia coli chaperone proteins, is an original member of the FKBP family. FEBS Lett. 371:1995;211-215.
3. Fischer G. Peptidyl-prolyl cis/trans isomerases and their effectors. Angew. Chem. Int. Ed. Engl. 33:1994;1415-1436.
4. Fischer G., Wittmann-Liebold B., Lang K., Kiefhaber T., Schmid F.X. Cyclophilin and peptidyl-prolyl cis-trans isomerase are probably identical proteins. Nature. 337:1989;476-478.
5. Furutani M., Iida T., Yamano S., Kamino K., Maruyama T. Biochemical and genetic characterization of an FK506-sensitive peptidyl prolyl cis-trans isomerase from a thermophilic archaeon, Methanococcus thermolithotrophicus. J. Bacteriol. 180:1998;388-394.
6. Galat A., Metcalfe S.M. Peptidylproline cis/trans isomerases. Prog. Biophys. Mol. Biol. 63:1995;67-118.
7. Harding M.W., Galat A., Uehling D.E., Schreiber S.L. A receptor for the immunosuppressant FK-506 is a cis-trans peptidyl-prolyl isomerase. Nature. 341:1989;761-763.
8. Harrison R.K., Stein R.L. Substrate specifities of the peptidyl cis-trans isomerase activities of cyclophilin and FK506 binding protein: evidence for the existence of a family of distinct enzymes. Biochemistry. 29:1990;3813-3816.
9. Hoaki T., Nishijima M., Kato M., Adachi K., Mizobuchi S., Hanzawa N., Maruyama T. Growth requirements of hyperthermophilic sulfur-dependent heterotrophic archaea isolated from a shallow submarine geothermal system with reference to their essential amino acids. Appl. Environ. Microbiol. 60:1994;2898-2904.
10. Hottenrott S., Schumann T., Plückthum A., Fischer G., Rahfeld J.-U. The Escherichia coli slyD is a metal ion-regulated peptidyl-prolyl cis/trans isomerase. J. Biol. Chem. 272:1997;15697-15701.
11. Iida T., Furutani M., Iwabuchi T., Maruyama T. Gene for a cyclophilin-type peptidyl-prolyl cis-trans isomerase from a halophilic archaeum, Halobacterium cutirubrum. Gene. 204:1997;139-144.
12. Isaki L., Beers R., Wu H.C. Nucleotide sequence of the Pseudomonas fluorescens signal peptidase II gene (lsp) and flanking genes. J. Bacteriol. 172:1990;6512-6517.
13. Kawarabayashi Y.et al. Complete sequence and gene organization of the genome of a hyperthermophilic archaebacterium, Pyrococcus horikoshii OT3. DNA Res. 5:1998;55-76.
14. Kay J.E. Structure-function relationships in the FK506-binding protein (FKBP) family of peptidylprolyl cis-trans isomerases. Biochem. J. 314:1996;361-385.
15. Klenk H.-P.et al. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon, Archaeoglobus fulgidus. Nature. 390:1997;364-370.
16. Nagashima K., Mitsuhashi S., Kamino K., Maruyama T. Cyclosporin A sensitive peptidyl-prolyl cis-trans isomerase in a halophilic archaeum, Halobacterium cutirubrum. Biochem. Biophys. Res. Commun. 198:1994;466-472.
17. Nielsen J.B., Foor F., Siekierka J.J., Hsu M.J., Ramadan N., Morin N., Shafiee A., Dahl A.M., Brizuela L., Chrebet G., Bostian K.A., Parent S.A. Yeast FKBP-13 is a membrane-associated FK506-binding protein encoded by the nonessential gene FKB2. Proc. Natl. Acad. Sci. USA. 89:1992;7471-7475.
18. Rahfeld J.-U., Schierhorn A., Mann K., Fischer G. A novel peptidyl-prolyl cis/trans isomerase from Escherichia coli. FEBS Lett. 343:1994;65-69.
19. Rahfeld J.-U., Rücknagel K.P., Stoller G., Horne S.M., Schierhorn A., Young K.D., Fischer G. Isolation and amina acid sequence of a new 22-kDa FKBP-like peptidyl-prolyl cis/trans isomerase of Escherichia coli. Similarity to Mip-like proteins of pathogenic bacteria. J. Biol. Chem. 271:1996;22130-22138.
20. Siekierka J.J., Hung S.H.Y., Poe M., Lin S.C., Sigal N.H. A cytosolic binding protein for the immunosuppressant FK506 has peptidyl-prolyl isomerase activity but is distinct from cyclophilin. Nature. 341:1989;755-757.
21. Smith D.R.et al. Complete genome sequence of Methanobacterium thermoautotrophicum DH: functional analysis and comparative genomics. J. Bacteriol. 179:1997;7135-7155.
22. Standaert R.F., Galat A., Verdine G.L., Schreiber S.L. Molecular cloning and overexpression of the human FK506-binding protein. Nature. 346:1990;671-674.
23. Stoller G., Rücknagel K.P., Nierhaus K.H., Schmid F.X., Fischer G., Rahfeld J.-U. A ribosome-associated peptidyl-prolyl cis/trans isomerase identified as the trigger factor. EMBO J. 14:1995;4939-4948.
24. Takahashi N., Hayano T., Suzuki M. Peptidyl-prolyl cis-trans isomerase is the cyclosporin A-binding protein cyclophilin. Nature. 337:1989;473-475.
25. Tropschug M., Watcher E., Mayer S., Schönbrunner E.R., Schmid F.X. Isolation and sequence of an FK506-binding protein from N. crassa which catalyses protein folding. Nature. 346:1990;674-677.
26. Van Duyne G.D., Standaert R.F., Karplus P.A., Schreber S.L., Clardy J. Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin. J. Mol. Biol. 229:1993;105-124.
27. Wolin E.A., Wolin M.J., Wolfe R.S. Formation of methane by bacterial extracts. J. Biol. Chem. 238:1963;2882-2886.
28. Yoshida T., Yohda M., Iida T., Maruyama T., Taguchi H., Yoshida M., Yazaki K., Ohta T., Endo I., Kagawa Y. Structural and functional characterization of homo-oligomeric complexes of recombinant α and β chaperonin subunits from the hyperthermophilic archaeum, Thermococcus strain KS-1. J. Mol. Biol. 273:1997;635-645.