Solution structure of Ace-AMP1, a potent antimicrobial protein extracted from onion seeds. Structural analogies with plant nonspecific lipid transfer proteins

Biochemistry

Volumn 37, Issue 11, 1998, Pages 3623-3637

  Tassin, Séverine ^a   Broekaert, Willem F ^b   Marion, Didier ^c   Acland, David P ^d   Ptak, Marius ^a,e   Vovelle, Françoise ^a,e   Sodano, Patrick ^a  

^a CENTRE DE BIOPHYSIQUE MOLÉCULAIRE   (France)

^b Univesité d'Orléans ^*  (France)

^c UNIVERSITY OF LEUVEN   (Belgium)

^d CEMAGREF   (France)

^e JEALOTT S HILL RESEARCH STATION   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIFUNGAL AGENT; CARBOXYFLUORESCEIN; LIPID TRANSFER PROTEIN; LIPOSOME; ONION EXTRACT; POLYPEPTIDE ANTIBIOTIC AGENT;

ARTICLE; DISULFIDE BOND; MOLECULAR MODEL; NONHUMAN; PHOSPHOLIPID MEMBRANE; PLANT SEED; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN ISOLATION; PROTEIN LIPID INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE;

AMINO ACID SEQUENCE; ANTI-INFECTIVE AGENTS; ANTIGENS, PLANT; CARRIER PROTEINS; DISULFIDES; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; ONIONS; PHOSPHOLIPIDS; PLANT PROTEINS; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; SEEDS; SEQUENCE HOMOLOGY, AMINO ACID; SOLUTIONS;

ALLIUM CEPA; TRITICUM AESTIVUM; ZEA MAYS;

EID: 0032539972     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9723515     Document Type: Article

References (69)

1. Stuart, L. S., and Harris, T. H. (1942) Cereal Chem. 19, 288-300.
2. Manners, D. J., and Marshall, J. J. (1973) Phytochemistry 12, 547-553.
3. Leah, R., Tommerup, H., Svendsen, I., and Mundy, J. (1991) J. Biol. Chem. 266, 1564-1573.
4. Vigers, A. J., Roberts, W. K., and Selitrennikoff, C. P. (1991) Mol. Plant-Microbe Interact. 4, 315-323.
5. Roberts, W. K., and Selitrennikoff, C. P. (1986) Biochim. Biophys. Acta 880, 161-171.
6. Broekaert, W. F., Mariën, W., Terras, F. R. G., De Bolle, M. F. C., Proost, P., Van Damme, J., Dillen, L., Claeys, M., Rees, S. B., Vanderleyden, L., and Cammue, B. P. A. (1992) Biochemistry 31, 4308-4314.
7. Cammue, B. P. A., De Bolle, M. F. C., Terras, F. R. G., Proost, P., Van Damme, J., Rees, S. B., Vanderleyden, L., and Broekaert, W. F. (1992) J. Biol. Chem. 267, 2228-2233.
8. Duvick, J. P., Rood, T., Rao, A. G., and Marshak, D. R. (1992) J. Biol. Chem. 267, 18814-18820.
9. Terras, F. R. G., Goderis, I. J., Van Leuven, F., Vanderleyden, J., Cammue, B. P. A., and Broekaert, W. F. (1992a) Plant Physiol. 100, 1055-1058.
10. Terras, F. R. G., Torrekens, S., Van Leuven, F., Osborn, R. W., Vanderleyden, J., Cammue, B. P. A., and Broekaert, W. F. (1993) FEBS Lett. 316, 233-240.
11. Terras, F. R. G., Eggermont, K., Kovaleva, V., Raikhel, N. V., Osborn, R. W., Rester, A., Rees, S. B., Vanderleyden, J., Cammue, B. P. A., and Broekaert, W. F. (1995) Plant Cell 7, 573-588.
12. Terras, F. R. G., Schoofs, H. M. E., De Bolle, M. F. C., Van Leuven, F., Rees, S. B., Vanderleyden, J., Cammue, B. P. A., and Broekaert, W. F. (1992b) J. Biol. Chem. 267, 15301-15309.
13. Molina, A., Segura, A., and Garcia-Olmedo, F. (1993) FEBS Lett. 316, 119-122.
14. Cammue, B. P. A., Thevissen, K., Hendriks, M., Eggermont, K., Goderis, I. J., Proost, P., Van Damme, J., Osborn, R. W., Guerbette, F., Kader, J. C., and Broekaert, W. F. (1995) Plant Physiol. 109, 445-455.
15. Nakamura, K., and Matsuoka, K. (1993) Plant Physiol. 101, 1-5.
16. Bednarek, S. Y., and Raikhel, N. V. (1991) Plant Cell 3, 1195-1206.
17. Neuhaus, J. M., Sticher, L., Meins, F., Jr., and Boiler, T. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 10362-10366.
18. Gomar, J., Sodano, P., Ptak, M., and Vovelle, F. (I997) Folding Des. 2, 183-192.
19. Gincel, E., Simorre, J. P., Caille, A., Marion, D., Ptak, M., and Vovelle, F. (1994) Eur. J. Biochem. 226, 413-422.
20. Gomar, J., Petit, M. C., Sodano, P., Sy, D., Marion, D., Kader, J. C., Vovelle, F., and Ptak, M. (1996) Protein Sci. 5, 565-577.
21. Shin, D. H., Lee, J. Y., Hwang, K. Y., Kim, K. K., and Suh, S. W. (1995) Structure 3, 189-199.
22. Heinemann, B., Andersen, K. V., Nielsen, P. R., Bech, L. M., and Poulsen, F. M. (1996) Protein Sci. 5, 13-23.
23. Lerche, M. H., Kragelund B. B., Bech, L. M., and Poulsen, F. M. (1997) Structure 5, 291-306.
24. Sterk, P., Booij, H., Schellekens, G. A., Van Kammen, A., and De Vries, S. C. (1991) Plant Cell 3, 907-921.
25. Garcia-Olmedo, F., Molina, A., Segura, A., and Moreno, M. (1995) Trends Microbiol. 3, 72-74.
26. Petit, M. C., Sodano, P., Marion, D., and Ptak, M. (1994) Eur. Biochem. 222, 1047-1054.
27. Record, E., Asther, Mi., Marion, D., and Asther M. (1995) Biochim. Biophys. Acta 1256, 18-24.
28. Wilschut, J. (1982) in Les Editions INSERM (Leserman, L. D., and Barbet, J., Eds.) p 137, INSERM, Paris.
29. States, D. J., Haberkorn, R. A., and Ruben, D. J. (1982) J. Magn. Reson. 48, 286-292.
30. Bax, A., and Davis, D. G. (1985) J. Magn. Reson. 65, 355-360.
31. Marion, D., Ikura, M., and Bax, A. (1989) J. Magn. Reson. 84, 425-430.
32. Shaka, A. J., and Freeman, R. (1983) J. Magn. Reson. 51, 169-173.
33. King, G., and Wright, P. E. (1983) J. Magn. Reson. 54, 328-332.
34. Piotto, M., Saudek, V., and Sklenar, V. (1992) J. Biomol. NMR 2, 661-665.
35. Brown, S. C., Weber, P. L., and Mueller, L. (1988) J. Magn. Reson. 77, 166-169.
36. Nilges, M., Clore, G. M., and Gronenborn, A. M. (1988) FEBS Lett. 229, 317-324.
37. Güntert, P., Braun, W., and Wüthrich, K. (1991) J. Mol. Biol. 217, 517-530.
38. Güntert, P., and Wüthrich, K. (1991) J. Biomol. NMR 1, 447-456.
39. Güntert, P., Berndt, K. D., and Wüthrich, K. (1993) J. Biomol. NMR 3, 601-606.
40. Eccles, C., Güntert, P., Billeter, M., and Wüthrich, K. (1991) J. Biomol. NMR 1, 111-130.
41. Szyperski, T., Güntert, P., Otting, G., and Wüthrich, K. (1991) J. Magn. Reson. 99, 552-560.
42. Brünger, A. T. (1992) The X-PLOR software manual version 3.1, Yale University, New Haven, CT.
43. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., and Karplus, M. (1983) J. Comput. Chem. 4, 187-217.
44. Hutchinson, E. G., and Thornton, J. M. (1996) Protein Sci. 5, 212-220.
45. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
46. Wüthrich, K. (1986) NMR of proteins and acid nucleics, Wiley, New York.
47. Sodano, P., and Ptak, M. (1995) J. Biomol. Struct. Dyn. 12, 1009-1022.
48. Laskowski, R. A., Rullmann, J. A. C., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486.
49. Richardson, J. S. (1981) Adv. Protein Chem. 34, 168-339.
50. Dubreil, L., Compoint, J. P., and Marion, D. (1997) J. Agric. Food Chem. 45, 108-116.
51. Sodano, P., Caille, A., Sy, D., de Person, G., Marion, D., and Ptak, M. (1997) FEBS Lett. 416, 130-134.
52. Le Bihan, T., Blochet, J. E., Désormeaux, A., Marion, D., and Pézolet, M. (1996) Biochemistry 35, 12712-12722.
53. Rico, M., Bruix, M., Gonzales, C., Monsalve, R. I., and Rodriguez, R. (1996) Biochemistry 35, 15672-15682.
54. Kreis, M., Forde, B. G., Rahman, S., Miflin, B. J., and Shewry, P. R. (1985) J. Mol. Biol. 183, 499-502.
55. Onaderra, M., Monsalve, R. I., Mancheno, J. M., Villalba, M., Marinez del Pozo, A., Gavilanez, J. G., and Rodriguez, R. (1994) Eur. J. Biochem. 225, 609-615.
56. Fleming, A. J., Mandel, T., Hofman, S., Sterk, P., De Vries, S. C., and Kuhlmeier, C. (1992) Plant J. 2, 855-862.
57. Thoma, S., Hecht, U., Kippers, A., Botella, J., De Vries, S., and Sommerville, C. (1994) Plant Physiol. 105, 35-45.
58. Kraulis, P. J. (1991) Acta Crystallogr., Sect. B: Struct. Sci. 48, 115-116.
59. Tchang, F., This, P., Stiefel, V., Arondel, V., Morch, M. D., Pages, M., Puigdomenech, P., Grellet, F., Delseny, M., Bouillon, P., Huet, J. C., Guerbette, F., Beauvais-Canle, F., Duranton, H., Pernolet, J. C., and Kader, J. C. (1988) J. Biol. Chem. 263, 16849-16855.
60. Désormeaux, A., Blochet, J. E., Pézolet, M., and Marion, D. (1992) Biochim. Biophys. Acta 1121, 137-152.
61. Mundy, J., and Rogers, J. C. (1986) Planta 169, 51-63.
62. Yu, Y. G., Chung, C. H., Fowler, A., and Suh, S. W. (1988) Arch. Biochem. Biophys. 265, 466-475.
63. Campos, F. A., and Richardson, M. (1984) FEBS Lett. 167, 221-225.
64. Torres-Schuman, S., Gogoy, J. A., and Pintor-Toro, J. (1992) Plant Mol. Biol. 18, 749-757.
65. Masuta, C., Furuno, M., Tanaka, H., Yamada, M., and Koiwai, A. (1992) FEBS Lett. 311, 119-123.
66. Bernhard, W. R., Thoma, S., Botella, J., and Somerville, C. R. (1991) Plant Physiol. 95, 164-170.
67. Soufleri, I. A., Vergnolle, C., Miginiac, K., and Kader, J. C. (1996) Planta 199, 229-237.
68. Pyee, J., and Kolattukudy, P. E. (1995) Plant J. 7, 49-59.
69. Tsuboi, S., Suga, T., Takishima, K., Mamiya, G., Matsui, K., Oseki, Y., and Yamada, M. (1991) J. Biochem. 110, 823-831.