-
1
-
-
0025896727
-
Water-protein interactions: Theory and experiment
-
Teeter, M. M. Water-protein interactions: Theory and experiment. Annu. Rev. Biophys. Biophys. Chem. 20, 577-600 (1991).
-
(1991)
Annu. Rev. Biophys. Biophys. Chem.
, vol.20
, pp. 577-600
-
-
Teeter, M.M.1
-
3
-
-
36549099780
-
The structure of liquid water at an extended hydrophobic surface
-
Lee, C. Y., MCammon, J. A. & Rossky, P. J. The structure of liquid water at an extended hydrophobic surface. J. Chem. Phys. 80, 4448-4455 (1984).
-
(1984)
J. Chem. Phys.
, vol.80
, pp. 4448-4455
-
-
Lee, C.Y.1
MCammon, J.A.2
Rossky, P.J.3
-
4
-
-
0028766418
-
Surface vibrational spectroscopic studies of hydrogen bonding and hydrophobicity
-
Du, Q., Freysz, E. & Shen, Y. R, Surface vibrational spectroscopic studies of hydrogen bonding and hydrophobicity. Science 264, 826-828 (1994).
-
(1994)
Science
, vol.264
, pp. 826-828
-
-
Du, Q.1
Freysz, E.2
Shen, Y.R.3
-
5
-
-
0026498010
-
The interdependence of protein surface topography and bound water molecules revealed by surface accessibility and fractal density measures
-
Kuhn, L. A. et al. The interdependence of protein surface topography and bound water molecules revealed by surface accessibility and fractal density measures. J. Mol. Biol 228, 13-22 (1992).
-
(1992)
J. Mol. Biol
, vol.228
, pp. 13-22
-
-
Kuhn, L.A.1
-
6
-
-
0026416668
-
Reconciling the magnitude of the microscopic and macroscopic hydrophobic effects
-
Sharp, K. A., Nicholls, A., Fine, R. F. & Honig, B. Reconciling the magnitude of the microscopic and macroscopic hydrophobic effects. Science 252, 106-109 (1991).
-
(1991)
Science
, vol.252
, pp. 106-109
-
-
Sharp, K.A.1
Nicholls, A.2
Fine, R.F.3
Honig, B.4
-
7
-
-
0029932338
-
Molecular-size corrections to the strength of the hydrophobic effect: A critical review
-
Sanchez-Ruiz, J. M. Molecular-size corrections to the strength of the hydrophobic effect: A critical review. Eur. Biophys. J. 24, 261-274 (1996).
-
(1996)
Eur. Biophys. J.
, vol.24
, pp. 261-274
-
-
Sanchez-Ruiz, J.M.1
-
8
-
-
0025217893
-
The actions of melittin on membranes
-
Dempsey, C. E. The actions of melittin on membranes. Biochim. Biophys. Acta 1031, 143-161 (1990).
-
(1990)
Biochim. Biophys. Acta
, vol.1031
, pp. 143-161
-
-
Dempsey, C.E.1
-
9
-
-
0020479083
-
The structure of melittin. I. Structure determinations and partial refinement
-
Terwilliger, T. C. & Eisenberg, D. The structure of melittin. I. Structure determinations and partial refinement. J. Biol. Chem. 257, 6010-6015 (1982).
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 6010-6015
-
-
Terwilliger, T.C.1
Eisenberg, D.2
-
10
-
-
0344605026
-
-
Ch. 7 (ed. Ellis, R. J.) Academic, San Diego
-
Clarke, A. R. & Lund, P. A. in The Chaperonins Ch. 7 (ed. Ellis, R. J.) 167-212 (Academic, San Diego, 1996).
-
(1996)
The Chaperonins
, pp. 167-212
-
-
Clarke, A.R.1
Lund, P.A.2
-
11
-
-
0017411710
-
The protein data bank: A computer-based archival file for macromolecular structures
-
Bernstein, F. C. et al. The protein data bank: A computer-based archival file for macromolecular structures. J. Biol. Chem. 112, 535-542 (1977).
-
(1977)
J. Biol. Chem.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
-
12
-
-
0000998079
-
The effects of solvent on the conformation and collective motions of protein: Normal mode analysis and molecular dynamics simulations of melittin in water and in vacuum
-
Kitao, A., Hirata, F. & Go, N. The effects of solvent on the conformation and collective motions of protein: Normal mode analysis and molecular dynamics simulations of melittin in water and in vacuum. Chem. Phys. 158, 447-472 (1991).
-
(1991)
Chem. Phys.
, vol.158
, pp. 447-472
-
-
Kitao, A.1
Hirata, F.2
Go, N.3
-
14
-
-
33645886199
-
The equilibrium solvation structure for the solvent-separated hydrophobic bond
-
Zichi, D. A. & Rossky, P. J. The equilibrium solvation structure for the solvent-separated hydrophobic bond. J. Chem. Phys. 83, 797-808 (1985).
-
(1985)
J. Chem. Phys.
, vol.83
, pp. 797-808
-
-
Zichi, D.A.1
Rossky, P.J.2
-
15
-
-
0018456521
-
Solvation. A molecular dynamics study of a dipeptide in water
-
Rossky, P. J. & Karplus, M. Solvation. A molecular dynamics study of a dipeptide in water. J. Am. Chem. Soc. 101, 1913-1937 (1979).
-
(1979)
J. Am. Chem. Soc.
, vol.101
, pp. 1913-1937
-
-
Rossky, P.J.1
Karplus, M.2
-
16
-
-
84986435733
-
GEPOL: An improved description of molecular surfaces. III. a new algorithm for the computation of the solvent-excluding surface
-
Pascual-Ahuir, J. L., Silla, E. & Tunon, I. GEPOL: An improved description of molecular surfaces. III. A new algorithm for the computation of the solvent-excluding surface. J. Comput. Chem. 15, 1127-1138 (1994).
-
(1994)
J. Comput. Chem.
, vol.15
, pp. 1127-1138
-
-
Pascual-Ahuir, J.L.1
Silla, E.2
Tunon, I.3
-
17
-
-
0026567099
-
The molecular basis of cooperativity in protein folding. Thermodynamic dissection of interdomain interactions in phosphoglycerate kinase
-
Freire, E., Murphy, K. P., Sanchez-Ruiz, J. M., Galiseo, M. L. & Privalov, P. L. The molecular basis of cooperativity in protein folding. Thermodynamic dissection of interdomain interactions in phosphoglycerate kinase. Biochemistry 31, 250-256 (1992).
-
(1992)
Biochemistry
, vol.31
, pp. 250-256
-
-
Freire, E.1
Murphy, K.P.2
Sanchez-Ruiz, J.M.3
Galiseo, M.L.4
Privalov, P.L.5
-
18
-
-
0004067382
-
-
(ed. Pullman, B.) Reidel, Dordrecht
-
Berendsen, H. J. C., Postma, J. P. M., van Gunsteren, W. F. & Hermans, J. in Intermolecular Forces (ed. Pullman, B.) 331-342 (Reidel, Dordrecht, 1981).
-
(1981)
Intermolecular Forces
, pp. 331-342
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Hermans, J.4
-
19
-
-
33645941402
-
The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin
-
Jorgensen, W. L. & Tirado-Rives, J. The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin. J. Am. Chem. Soc. 110, 1657-1671 (1988).
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 1657-1671
-
-
Jorgensen, W.L.1
Tirado-Rives, J.2
-
20
-
-
22944467757
-
Computer "experiments" on classical fluids. I. Thermodynamical properties of Lennard-Jones molecules
-
Verlet, L. Computer "experiments" on classical fluids. I. Thermodynamical properties of Lennard-Jones molecules. Phys. Rev. 159, 98-103 (1967).
-
(1967)
Phys. Rev.
, vol.159
, pp. 98-103
-
-
Verlet, L.1
-
21
-
-
33646940952
-
Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J.-P., Ciccotti, G. & Berendsen, H. J. C. Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes. J. Comput. Phys. 23, 327-341 (1977).
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.-P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
22
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
Nicholls, A., Sharp, K. A. & Honig, B. Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11, 281-296 (1991).
-
(1991)
Proteins
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
|