-
1
-
-
0029871975
-
The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis
-
Aldaz, H., Schuster, E. & Baker, T. A. (1996). The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis. Cell, 85, 257-269.
-
(1996)
Cell
, vol.85
, pp. 257-269
-
-
Aldaz, H.1
Schuster, E.2
Baker, T.A.3
-
2
-
-
0029814410
-
Retroviral integrase, putting the pieces together
-
Andrake, M. D. & Skalka, A. M. (1996). Retroviral integrase, putting the pieces together. J. Biol. Chem. 271, 19633-19636.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 19633-19636
-
-
Andrake, M.D.1
Skalka, A.M.2
-
3
-
-
0028317055
-
Identification of residues in the Mu transposase essential for catalysis
-
Baker, T. A. & Luo, L. (1994). Identification of residues in the Mu transposase essential for catalysis. Proc. Natl Acad. Sci. USA, 91, 6645-6658.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 6645-6658
-
-
Baker, T.A.1
Luo, L.2
-
4
-
-
0026019625
-
Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: A two metal ion mechanism
-
Beese, L. S. & Steitz, T. A. (1991). Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism. EMBO J. 10, 25-33.
-
(1991)
EMBO J.
, vol.10
, pp. 25-33
-
-
Beese, L.S.1
Steitz, T.A.2
-
5
-
-
0022695021
-
Potential metal-binding domains in nucleic acid binding proteins
-
Berg, J. M. (1986). Potential metal-binding domains in nucleic acid binding proteins. Science, 232, 485-487.
-
(1986)
Science
, vol.232
, pp. 485-487
-
-
Berg, J.M.1
-
6
-
-
0029643858
-
The catalytic domain of avian sarcoma virus integrase: Conformation of the active site residues in the presence of divalent cations
-
Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A., Merkel, G., Katz, R. A. & Skalka, A. M. (1996). The catalytic domain of avian sarcoma virus integrase: conformation of the active site residues in the presence of divalent cations. Structure, 4, 89-96.
-
(1996)
Structure
, vol.4
, pp. 89-96
-
-
Bujacz, G.1
Jaskolski, M.2
Alexandratos, J.3
Wlodawer, A.4
Merkel, G.5
Katz, R.A.6
Skalka, A.M.7
-
7
-
-
0016325623
-
Temperature-sensitive mutants of bacteriophage Mu
-
Bukhari, A. I. & Curtin, P. (1974). Temperature-sensitive mutants of bacteriophage Mu. J. Virol. 14, 1615-1616.
-
(1974)
J. Virol.
, vol.14
, pp. 1615-1616
-
-
Bukhari, A.I.1
Curtin, P.2
-
8
-
-
0021908229
-
Amplification and purification of the bacteriophage Mu encoded B transposition protein
-
Chaconas, G., Gloor, G. & Miller, J. L. (1985). Amplification and purification of the bacteriophage Mu encoded B transposition protein. J. Biol. Chem. 260, 2662-2669.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 2662-2669
-
-
Chaconas, G.1
Gloor, G.2
Miller, J.L.3
-
9
-
-
0030199188
-
DNA transposition: Jumping gene machine, some assembly required
-
Chaconas, G., Lavoie, B. D. & Watson, M. A. (1996). DNA transposition: jumping gene machine, some assembly required. Curr. Biol. 7, 817-820.
-
(1996)
Curr. Biol.
, vol.7
, pp. 817-820
-
-
Chaconas, G.1
Lavoie, B.D.2
Watson, M.A.3
-
10
-
-
0028774530
-
A novel class of winged helix-turn-helix proteins: The DNA-binding domain of Mu transposase
-
Clubb, R. T., Omichinski, J. G., Savilahti, H., Mizuuchi, K., Gronenborn, A. M. & Clore, G. M. (1994). A novel class of winged helix-turn-helix proteins: the DNA-binding domain of Mu transposase. Structure 2, 1041-1048.
-
(1994)
Structure
, vol.2
, pp. 1041-1048
-
-
Clubb, R.T.1
Omichinski, J.G.2
Savilahti, H.3
Mizuuchi, K.4
Gronenborn, A.M.5
Clore, G.M.6
-
11
-
-
0040483073
-
Gene 32 protein, the single-stranded DNa binding protein from bacteriophage T4, is a zinc metalloprotein
-
Giedroc, D. P., Keating, K. M., Williams, K. R., Konigsberg, W. H. & Coleman, J. E. (1986). Gene 32 protein, the single-stranded DNA binding protein from bacteriophage T4, is a zinc metalloprotein. Proc. Natl Acad. Sci. USA, 83, 8452-8456.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 8452-8456
-
-
Giedroc, D.P.1
Keating, K.M.2
Williams, K.R.3
Konigsberg, W.H.4
Coleman, J.E.5
-
12
-
-
0029609126
-
DNA transposition: From a black box to a color monitor
-
Grindley, N. D. F. & Leschziner, A. E. (1995). DNA transposition: from a black box to a color monitor. Cell, 83, 1063-1066.
-
(1995)
Cell
, vol.83
, pp. 1063-1066
-
-
Grindley, N.D.F.1
Leschziner, A.E.2
-
13
-
-
0031046749
-
Zn site redesign in T4 gene 32 protein: Structure and stability of Co(II)-complexes formed by wild-type and metal-ligand substitution mutants
-
Guo, J. & Giedroc, D. P. (1997). Zn site redesign in T4 gene 32 protein: structure and stability of Co(II)-complexes formed by wild-type and metal-ligand substitution mutants. Biochemistry, 36, 730-742.
-
(1997)
Biochemistry
, vol.36
, pp. 730-742
-
-
Guo, J.1
Giedroc, D.P.2
-
14
-
-
0029360522
-
81, is the non-thiolate Zn ligand
-
81, is the non-thiolate Zn ligand. J. Am. Chem. Soc. 117, 9437-9440.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 9437-9440
-
-
Guo, J.1
Wang, S.2
Dong, J.3
Qiu, H.4
Scott, R.A.5
Giedroc, D.P.6
-
15
-
-
0000565957
-
Carboxyl-terminal mutants of phage Mu transposase
-
Harshey, R. M. & Cuneo, S. D. (1986). Carboxyl-terminal mutants of phage Mu transposase. J. Genet. 65, 159-174.
-
(1986)
J. Genet.
, vol.65
, pp. 159-174
-
-
Harshey, R.M.1
Cuneo, S.D.2
-
17
-
-
0028883476
-
Mutational analysis of the att DNA-binding domain of phage Mu transposase
-
Kim, K. & Harshey, R. M. (1995). Mutational analysis of the att DNA-binding domain of phage Mu transposase. Nucl. Acids Res. 23, 3937-3943.
-
(1995)
Nucl. Acids Res.
, vol.23
, pp. 3937-3943
-
-
Kim, K.1
Harshey, R.M.2
-
18
-
-
0028883169
-
Step-arrest mutants of phage Mu transposase
-
Kim, K., Namgoong, S-Y., Jayaram, M. & Harshey, R. M. (1995). Step-arrest mutants of phage Mu transposase. J. Biol. Chem. 270, 1472-1479.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 1472-1479
-
-
Kim, K.1
Namgoong, S.-Y.2
Jayaram, M.3
Harshey, R.M.4
-
19
-
-
0026719238
-
Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases
-
Kulkosky, J., Jones, K. S., Katz, R. A., Mack, J. P. G. & Skalka, A. M. (1992). Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases. Mol. Cell. Biol. 12, 2331-2338.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 2331-2338
-
-
Kulkosky, J.1
Jones, K.S.2
Katz, R.A.3
Mack, J.P.G.4
Skalka, A.M.5
-
20
-
-
0023613953
-
Rapid and efficient site-specific mutagenesis without phenotypic selection
-
Kunkel, T. A., Roberts, J. D. & Zabour, R. A. (1987). Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 154, 367-382.
-
(1987)
Methods Enzymol.
, vol.154
, pp. 367-382
-
-
Kunkel, T.A.1
Roberts, J.D.2
Zabour, R.A.3
-
21
-
-
0025876672
-
DNA-protein complexes during attachment-site synapsis in Mu DNA transposition
-
Kuo, C. F., Zou, A., Jayaram, M., Getzoff, E. & Harshey, R. M. (1991). DNA-protein complexes during attachment-site synapsis in Mu DNA transposition. EMBO J. 10, 1585-1591.
-
(1991)
EMBO J.
, vol.10
, pp. 1585-1591
-
-
Kuo, C.F.1
Zou, A.2
Jayaram, M.3
Getzoff, E.4
Harshey, R.M.5
-
23
-
-
0029670473
-
2+-dependent 3′-processing activity of human immunodeficiency virus type I integrase in vitro
-
2+-dependent 3′-processing activity of human immunodeficiency virus type I integrase in vitro. Biochemistry, 35, 3837-3844.
-
(1996)
Biochemistry
, vol.35
, pp. 3837-3844
-
-
Lee, S.P.1
Han, M.K.2
-
24
-
-
0025860233
-
Two mutations of phage Mu transposase that affect strand transfer or interactions with B protein lie in distinct polypeptide domains
-
Leung, P. C. & Harshey, R. M. (1991). Two mutations of phage Mu transposase that affect strand transfer or interactions with B protein lie in distinct polypeptide domains. J. Mol. Biol. 219, 189-199.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 189-199
-
-
Leung, P.C.1
Harshey, R.M.2
-
25
-
-
0024602375
-
Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer
-
Leung, P. C., Teplow, D. B. & Harshey, R. M. (1989). Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer. Nature 338, 656-658.
-
(1989)
Nature
, vol.338
, pp. 656-658
-
-
Leung, P.C.1
Teplow, D.B.2
Harshey, R.M.3
-
26
-
-
0023122585
-
B protein of bacteriophage Mu is an ATPase that preferentially simulates intermolecular DNA strand transfer
-
Maxwell, A., Craigie, R. & Mizuuchi, K. (1987). B protein of bacteriophage Mu is an ATPase that preferentially simulates intermolecular DNA strand transfer. Proc. Natl Acad. Sci. USA, 84, 699-703.
-
(1987)
Proc. Natl Acad. Sci. USA
, vol.84
, pp. 699-703
-
-
Maxwell, A.1
Craigie, R.2
Mizuuchi, K.3
-
27
-
-
0026637325
-
Transpositional recombination: Mechanistic insights from studies of Mu and other elements
-
Mizuuchi, K. (1992). Transpositional recombination: mechanistic insights from studies of Mu and other elements. Annu. Rev. Biochem. 61, 1011-1051.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 1011-1051
-
-
Mizuuchi, K.1
-
28
-
-
0026708067
-
Assembly of the active form of transposase-Mu DNA complex: A critical control point in Mu transposition
-
Mizuuchi, M., Baker, T. A. & Mizuuchi, K. (1992). Assembly of the active form of transposase-Mu DNA complex: a critical control point in Mu transposition. Cell, 70, 303-311.
-
(1992)
Cell
, vol.70
, pp. 303-311
-
-
Mizuuchi, M.1
Baker, T.A.2
Mizuuchi, K.3
-
29
-
-
0342934743
-
Structural domains in phage Mu transposase: Identification of the site-specific DNA-binding domain
-
Nakayama, C., Teplow, D. B. & Harshey, R. M. (1987). Structural domains in phage Mu transposase: identification of the site-specific DNA-binding domain. Proc. Natl Acad. Sci. USA, 84, 1809-1813.
-
(1987)
Proc. Natl Acad. Sci. USA
, vol.84
, pp. 1809-1813
-
-
Nakayama, C.1
Teplow, D.B.2
Harshey, R.M.3
-
30
-
-
0028180564
-
DNA-protein cooperativity in the assembly and stabilization of Mu strand transfer complex
-
Namgoong, S.-Y., Jayaram, M., Kim, K. & Harshey, R. M. (1994). DNA-protein cooperativity in the assembly and stabilization of Mu strand transfer complex. J. Mol. Biol. 238, 514-527.
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 514-527
-
-
Namgoong, S.-Y.1
Jayaram, M.2
Kim, K.3
Harshey, R.M.4
-
31
-
-
0028034050
-
Characterization of the minimal binding domain of the HIV integrase protein
-
Puras Lutzke, R. A., Vink, C. & Plasterk, R. H. (1994). Characterization of the minimal binding domain of the HIV integrase protein. Nucl. Acids Res. 22, 4123-4131.
-
(1994)
Nucl. Acids Res.
, vol.22
, pp. 4123-4131
-
-
Puras Lutzke, R.A.1
Vink, C.2
Plasterk, R.H.3
-
32
-
-
0028298829
-
Effects of substitution of proposed Zn(II) ligand His81 or His64 in phage T4 gene 32 protein: Spectroscopic evidence for a novel zinc coordination complex
-
Qui, H. & Giedroc, D. P. (1994). Effects of substitution of proposed Zn(II) ligand His81 or His64 in phage T4 gene 32 protein: spectroscopic evidence for a novel zinc coordination complex. Biochemistry, 33, 8139-8148.
-
(1994)
Biochemistry
, vol.33
, pp. 8139-8148
-
-
Qui, H.1
Giedroc, D.P.2
-
33
-
-
0029129435
-
Structure of the bacteriophage Mu transposase core: A common structural motif for DNA transposition and retroviral integration
-
Rice, P. & Mizuuchi, K. (1995). Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration. Cell, 82, 209-220.
-
(1995)
Cell
, vol.82
, pp. 209-220
-
-
Rice, P.1
Mizuuchi, K.2
-
34
-
-
0029986753
-
Mu transpositional recombination: Donor DNA cleavage and strand transfer in trans by the Mu transposase
-
Savilahti, H. & Mizuuchi, K. (1996). Mu transpositional recombination: donor DNA cleavage and strand transfer in trans by the Mu transposase. Cell, 85, 271-280.
-
(1996)
Cell
, vol.85
, pp. 271-280
-
-
Savilahti, H.1
Mizuuchi, K.2
-
35
-
-
0029096898
-
The phage Mu transpososome core: DNA requirements for assembly and function
-
Savilahti, H., Rice, P. A. & Mizuuchi, K. (1995). The phage Mu transpososome core: DNA requirements for assembly and function. EMBO J. 14, 4893-4903.
-
(1995)
EMBO J.
, vol.14
, pp. 4893-4903
-
-
Savilahti, H.1
Rice, P.A.2
Mizuuchi, K.3
-
36
-
-
0024501683
-
A protein factor which reduces the negative supercoiling in the Mu DNA strand transfer reaction in Escherichia coli integration host factor
-
Surette, M. G. & Chaconas, G. (1989). A protein factor which reduces the negative supercoiling in the Mu DNA strand transfer reaction in Escherichia coli integration host factor. J. Biol. Chem. 264, 3028-3034.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 3028-3034
-
-
Surette, M.G.1
Chaconas, G.2
-
37
-
-
0023663468
-
Transpososomes: Stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA
-
Surette, M. G., Buch, S. J. & Chaconas, G. (1987). Transpososomes: stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA. Cell, 49, 253-262.
-
(1987)
Cell
, vol.49
, pp. 253-262
-
-
Surette, M.G.1
Buch, S.J.2
Chaconas, G.3
-
38
-
-
0027979780
-
Crucial role for DNA supercoiling in Mu transposition: A kinetic study
-
Wang, Z. & Harshey, R. M. (1994). Crucial role for DNA supercoiling in Mu transposition: a kinetic study. Proc. Natl Acad. Sci. USA, 91, 699-703.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 699-703
-
-
Wang, Z.1
Harshey, R.M.2
-
39
-
-
0029870895
-
Kinetic and structural probing of the precleavage synaptic complex (Type0) formed during phage Mu transposition
-
Wang, Z., Namgoong, S.-Y., Zhang, X. & Harshey, R. M. (1996). Kinetic and structural probing of the precleavage synaptic complex (Type0) formed during phage Mu transposition. J. Biol. Chem. 271, 9619-9626.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 9619-9626
-
-
Wang, Z.1
Namgoong, S.-Y.2
Zhang, X.3
Harshey, R.M.4
-
40
-
-
0029941285
-
Three-site synapsis during Mu DNA transposition: A critical intermediate preceding engagement of the active site
-
Watson, M. A. & Chaconas, G. (1996). Three-site synapsis during Mu DNA transposition: a critical intermediate preceding engagement of the active site. Cell, 85, 435-445.
-
(1996)
Cell
, vol.85
, pp. 435-445
-
-
Watson, M.A.1
Chaconas, G.2
-
41
-
-
0029151254
-
A novel DNA binding and nuclease activity in domain III of Mu transposase: Evidence for a catalytic region involved in donor cleavage
-
Wu, Z. & Chaconas, G. (1995). A novel DNA binding and nuclease activity in domain III of Mu transposase: evidence for a catalytic region involved in donor cleavage. EMBO J. 14, 3835-3843.
-
(1995)
EMBO J.
, vol.14
, pp. 3835-3843
-
-
Wu, Z.1
Chaconas, G.2
-
42
-
-
0029048507
-
A domain sharing model for active site assembly within the Mu A tetramer during transposition: The enhancer may specify domain contributions
-
Yang, J.-Y., Kim, K., Jayaram, M. & Harshey, R. M. (1995). A domain sharing model for active site assembly within the Mu A tetramer during transposition: the enhancer may specify domain contributions. EMBO J. 14, 2374-2384.
-
(1995)
EMBO J.
, vol.14
, pp. 2374-2384
-
-
Yang, J.-Y.1
Kim, K.2
Jayaram, M.3
Harshey, R.M.4
-
43
-
-
0029943157
-
Positional information within the Mu transposase tetramer: Catalytic contributions of individual monomers
-
Yang, J.-Y., Jayaram, M. & Harshey, R. M. (1996). Positional information within the Mu transposase tetramer: catalytic contributions of individual monomers. Cell, 85, 447-455.
-
(1996)
Cell
, vol.85
, pp. 447-455
-
-
Yang, J.-Y.1
Jayaram, M.2
Harshey, R.M.3
-
44
-
-
0030478950
-
Zinc folds the N-terminal domain of HIV-1 integrase, promotes multimerization, and enhances catalytic activity
-
Zheng, R., Jenkins, T. M. & Craigie, R. (1996). Zinc folds the N-terminal domain of HIV-1 integrase, promotes multimerization, and enhances catalytic activity. Proc. Natl Acad. Sci. USA, 93, 13659-13664.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 13659-13664
-
-
Zheng, R.1
Jenkins, T.M.2
Craigie, R.3
|