Rapid design of denaturing gradient-based two-dimensional electrophoretic gene mutational scanning tests

Nucleic Acids Research

Volumn 26, Issue 10, 1998, Pages 2398-2406

  Van Orsouw, Nathalie J ^b   Dhanda, Rahul K ^b   Rines, R David ^b   Smith, Wendy M ^a   Sigalas, Iakovos ^b   Eng, Charis ^a   Vijg, Jan ^b  

^a DANA FARBER CANCER INSTITUTE   (United States)

^b HARVARD INSTITUTES OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DENATURING GRADIENT GEL ELECTROPHORESIS; GENE MUTATION; GENETIC SCREENING; ONCOGENE; PRIORITY JOURNAL; TWO DIMENSIONAL ELECTROPHORESIS;

CARRIER PROTEINS; DNA; DNA MUTATIONAL ANALYSIS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; EXONS; GENES, TUMOR SUPPRESSOR; GENETIC SCREENING; HUMANS; NEOPLASM PROTEINS; NUCLEAR PROTEINS; NUCLEIC ACID DENATURATION; POLYMERASE CHAIN REACTION;

EID: 0032524750     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.10.2398     Document Type: Article

References (30)

1. Eng, C. and Vijg, J. (1997) Nature Biotechnol., 15, 422-426.
2. Orita, M., Iwahana, H., Kanazawa, H., Hayashi, K. and Sekiya, T. (1989) Proc. Natl. Acad. Sci. USA, 86, 2766-2770.
3. Liu, Q. and Sommer, S.S. (1995) BioTechniques, 18, 470-477.
4. Cotton, R.G.H., Rodriques, N.R. and Campbell, R.D. (1988) Proc. Natl. Acad. Sci. USA, 85, 4397-4401.
5. Mashal, R.D., Koontz, J. and Sklar, J. (1995) Nature Genet., 9, 177-183.
6. Youil, R., Kemper, B.W. and Cotton, R.G.H. (1995) Proc. Natl. Acad. Sci. USA, 92, 87-91.
7. Fischer, S.G. and Lerman, L.S. (1983) Proc. Natl. Acad. Sci. USA, 80, 1579-1583.
8. Sheffield, V.C., Cox, D.R., Lerman, L.S. and Myers, R.M. (1989) Proc. Natl. Acad. Sci. USA, 86, 232-236.
9. Abrams, E.S., Murdaugh, S.E. and Lerman, L.S. (1990) Genomics, 7, 463-475.
10. Lipshutz, R.J., Morris, D., Chee, M., Hubbell, E., Kozal, M.J., Shah, N., Yang, R. and Fodor, S.P. (1995) BioTechniques, 19, 442-447.
11. Chee, M., Yang, R., Hubbell, E., Berno, A., Huang, X.C., Stern, D., Winkler, J., Lockhart, D.J., Morris, M.S. and Fodor, S.P.A. (1996) Science, 274, 610-614.
12. Guldberg, P., Henriksen, K.F. and Guttler, F. (1993) Genomics, 17, 141-146.
13. Sheffield, V.C., Beck, J.S., Kwitek, A.E., Sandstrom, D.W. and Stone, E.M. (1993) Genomics, 16, 325-332.
14. Moyret, C., Theillet, C., Puig, P.L., Moles, J.-P., Thomas, G. and Hamelin, R. (1994) Oncogene, 9, 1739-1743.
15. Lerman, L.S. and Silverstein, K. (1987) Methods Enzymol., 155, 501-527.
16. Li, D., van Orsouw, N.J., Huang, C. and Vijg, J. (1996) In Pfeifer, G.P. (ed.), Technologies for Detection of DNA Damage and Mutations. Plenum Press, New York, NY, pp. 291-305.
17. Wu, Y., Hofstra, R.M., Scheffer, H., Uitterlinden, A.G., Mullaart, E., Buys, C.H. and Vijg, J. (1996) Hum. Mutat., 8, 160-167.
18. van Orsouw, N.J., Li, D., van der Vlies, P., Scheffer, H., Eng, C., Buys, C.H.C.M., Li, F.P. and Vijg, J. (1996) Hum. Mol. Genet., 5, 755-761.
19. Nyström-Lahti, M., Wu, Y., Moisio, A.-L., Hofstra, R.M.W., Osinga, J., Mecklin, J.-P., Jarvinen, H.J., Leisti, J., Buys, C.H.C.M., de la Chapelle, A. and Peltomaki, P. (1996) Hum. Mol. Genet., 5, 763-769.
20. Wu, Y., Nyström-Lahti, M., Osinga, J., Looman, M.W., Peltomaki, P., Aaltonen, L.A., de la Chapelle, A., Hofstra, R.M. and Buys, C.H. (1997) Genes Chromosomes Cancer, 18, 269-278.
21. Sasaki, S., Tokino, T., Muto, M.T. and Nakamura, Y. (1997) Hum. Mutat., 9, 164-171.
22. Li, D. and Vijg, J. (1996) Nucleic Acids Res., 24, 538-539.
23. Myers, R.M., Fischer, S.G., Lerman, L.S. and Maniatis, T. (1985) Nucleic Acids Res., 13, 3131-3145.
24. Toguchida, J., McGee, T.L., Paterson, J.C., Eagle, J.R., Tucker, S., Yandell, D.W. and Dryja, T.P. (1993) Genomics, 17, 535-543.
25. Kolodner, R.D., Hall, N.R., Lipford, J.R., Kane, M.F., Morrison, P., Finan, P.J., Burn, J., Chapman, P., Earabino, C., Merchant, E. and Bishop, D.T. (1995) Cancer Res., 55, 242-248.
26. Smith, T.M., Lee, M., Szabo, C., Jerome, N., McEuen, M., Taylor, M., King, M.-C. and Hood, L. (1996) Genome Res., 6, 1-21.
27. Dhanda, R.K., van Orsouw, N.J., Sigalas, I., Eng, C. and Vijg, J. (1998) BioTechniques, in press.
28. Rines, R.D., van Orsouw, N.J., Sigalas, I., Li, F.P., Eng, C. and Vijg, J. (1998) Carcinogenesis, in press.
29. Smith, W., van Orsouw, N.J., Fox, E.A., Kolodner, R.D., Vijg, J. and Eng, C. (1998) Genetic Testing, in press.
30. Drews, J. (1996) Nature Biotechnol., 14, 1516-1518.