Structure and organization of the RBMY genes on the human Y chromosome: Transposition and amplification of an ancestral autosomal hnRNPG gene

Genomics

Volumn 49, Issue 2, 1998, Pages 283-289

  Chai, Ning Ning ^a   Zhou, Haiyan ^a   Hernandez, Joseph ^a   Najmabadi, Hossein ^b   Bhasin, Shalender ^b   Yen, Pauline H ^a  

^a HARBOR UCLA MEDICAL CENTER   (United States)

^b CHARLES R DREW UNIVERSITY OF MEDICINE AND SCIENCE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEAR PROTEIN; NUCLEAR PROTEIN RBMY; UNCLASSIFIED DRUG;

ARTICLE; AUTOSOME; DNA TRANSPOSITION; GENE STRUCTURE; GENETIC ORGANIZATION; HUMAN; HUMAN CELL; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PSEUDOGENE; SEQUENCE HOMOLOGY; SPERM; Y CHROMOSOME;

EID: 0032522156     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1998.5255     Document Type: Article

References (31)

1. Borenfreund E., Fitt E., Bendich A. Isolation and properties of deoxyribonucleic acid from mammalian sperm. Nature. 191:1961;1375-1377.
2. Chai N. N., Salido E. C., Yen P. H. Multiple functional copies of theRBMgene family, a spermatogenesis candidate on the human Y chromosome. Genomics. 45:1997;355-361.
3. Chandley A. C., Cooke H. J. Human male fertility: Y-linked genes and spermatogenesis. Hum. Mol. Genet. 3:1994;1449-1452.
4. Conrad C., Hierl T., Glaser B., Taylor K., Zeitler S., Chandley A. C., Schempp W. High-resolution fluorescencein situhybridization ofRBM- andTSPY- related cosmids on released Y chromatin in humans and pygmy chimpanzees. Chromosome Res. 4:1996;201-206.
5. Cooke H. J., Lee M., Kerr S., Ruggiu M. A murine homologue of the humanDAZgene is autosomal and expressed only in male and female gonads. Hum. Mol. Genet. 5:1996;513-516.
6. Delbridge M. L., Harry J. L., Toder R., O'Neill R. J. W., Ma K., Chandley A. C., Graves J. A. M. A human candidate spermatogenesis gene,RBM1,is conserved and amplified on the marsupial Y chromosome. Nat. Genet. 15:1997;131-136.
7. Delbridge, M. L. Ma, K. Subbaroa, M. N. Cooke, H. J. Bhasin, S. Marshall-Graves, J. A. Evolution of mammalianhnRNPGand its relationship with the putative azoospermia factorRBM., Genomics.
8. Elliott D. J., Ma K., Kerr S. M., Thakrar R., Speed R., Chandley A. C., Cooke H. AnRBMhomologue maps to the mouse Y chromosome and is expressed in germ cells. Hum. Mol. Genet. 5:1996;869-874.
9. Elliott D. J., Millar M. R., O'Ghene K., Ross A., Kiesewetter F., Pryor J., McIntyre M., Hargreave T. B., Saunders P. T. K., Vogt P. H., Chandley A. C., Cooke H. Expression ofRBMin the nuclei of human germ cells is dependent on a critical region of the Y chromosome long arm. Proc. Natl. Acad. Sci. USA. 94:1997;3848-3853.
10. Foote S., Vollrath D., Hilton A., Page D. C. The human Y chromosome: Overlapping DNA clones spanning the euchromatic region. Science. 258:1992;60-66.
11. Foresta C., Ferlin A., Garolla A., Rossato M., Barbaux S., de Bortoli A. Y-chromosome deletions in idiopathic severe testiculopathies. J. Clin. Endocrinol. Metab. 82:1997;1075-1080.
12. Jones M. H., Khwaja O. S. A., Briggs H., Lambson B., Davey P. M., Chalmers J., Zhou C-Y., Walker E. M., Zhang Y., Todd C., Ferguson-Smith M. A., Affara N. A. A set of ninety-seven overlapping yeast artificial chromosome clones spanning the human Y chromosome euchromatin. Genomics. 24:1994;266-275.
13. Kobayashi K., Mizuno K., Hida A., Komaki R., Tomita K., Matsushita I., Namiki M., Iwamato T., Tamura S., Micowada S., Nakahori Y, . and Nakagome Y. PCR analysis of the Y chromosome long arm in azoospermic patients: Evidence for a second locus required for spermatogenesis. Hum. Mol. Genet. 3:1994;1965-1967.
14. Laval S. H., Glenister P. H., Rasberry C., Thornton C. E., Mahadevaiah S. K, Cooke H. J., Burgoyne P. S., Cattanach B. M. Y chromosome short arm-Sxrrecombination in XSxr/Y males causes deletion ofRBMand XY female sex reversal. Proc. Natl. Acad. Sci. USA. 92:1995;10403-10407.
15. Lee W-C., Ferrero G. B., Chinault A C., Yen P. H., Ballabio A. A yeast artificial chromosome contig linking the steroid sulfatase and Kallmann syndrome loci on the human X chromosome short arm. Genomics. 18:1993;1-6.
16. Ma K., Inglis J. D., Sharkey A., Bickmore W. A., Hill R. E., Prosser E. J., Speed R. M., Thomson E. J., Jobling M., Taylor K., Wolfe J., Cooke H. J., Hargreave T. B., Chandley A. C. A Y chromosome gene family with RNA-binding protein homology: Candidates for the azoospermia factor AZF controlling human spermatogenesis. Cell. 75:1993;1287-1295.
17. Najmabadi H., Chai N., Kapali A., Subbarao M. N., Bhasin D., Woodhouse E., Yen P., Bhasin S. Genomic structure of a Y-specific RNA binding motif (RBM) containing gene: A putative candidate for a subset of male infertility. J. Clin. Endocrinol. Metab. 81:1996;2159-2164.
18. Prosser J., Inglis J. D., Condie A., Ma K., Kerr S., Thakrar R., Taylor K., Cameron J. M., Cooke H. J. Degeneracy in human multi-copyRBM(YRRM), a candidate spermatogenesis gene. Mamm. Genome. 7:1996;835-842.
19. Pryor J. L., Kent-First M., Muallem A., Van Bergen A. H., Nolten W. E., Meisner L., Roberts K. P. Microdeletions in the Y chromosome of infertile men. N. Engl. J. Med. 336:1997;534-539.
20. Reijo R., Lee T-Y., Salo P., Alagappan R., Brown L. G., Rosenberg M., Rozen S., Jaffe T., Straus D., Hovatta O, de la Chapell A., Silber S., Page D. C. Diverse spermatogenic defects in humans caused by Y chromosome deletions encompassing a novel RNA-binding protein gene. Nat. Genet. 10:1995;383-393.
21. Reijo R., Seligman J., Dinulos M. B., Jaffe T., Brown L. G., Disteche C. M., Page D. C. Mouse autosomal homolog ofDAZ,a candidate male sterility gene in humans, is expressed in male germ cells before and after puberty. Genomics. 35:1996;346-352.
22. Sambrook J., Fritsch E. F., Maniatis T. Molecular Cloning: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
23. Saxena R., Brown L. G., Hawkins T., Alagappan R. K., Skaletsky H., Reeve M. P., Reijo R., Rozen S., Dinulos M. G., Disteche C. M., Page D. C. TheDAZgene cluster on the human Y chromosome arose from an autosomal gene that was transposed, repeatedly amplified and pruned. Nat. Genet. 14:1996;292-299.
24. Seboun E., Barbaux S., Bourgeron T., Nish S., Algonik A., Egashira M., Nikkawa N., Bishop C., Fellous M., McElreavey K., Kasahara M. Gene sequence, localization, and evolutionary conservation ofDAZLA,a candidate male sterility gene. Genomics. 41:1997;227-235.
25. Shan Z., Hirschmann P., Seebacher T., Edelmann A, Jauch A., Morell J., Urbitsch P., Vogt P. H. ASPGYcopy homologous to the mouse geneDazlaand theDrosophilageneBouleis autosomal and expressed only in the human male gonad. Hum. Mol. Genet. 12:1996;2005-2011.
26. Soulard M., Valle V. D., Siomi M., Pinol-Roma S., Codogno P., Bauvy C., Bellini M., Lacroix J-C., Monod G., Dreyfuss G., Larsen C-J. HnRNP G: Sequence and characterization of a glycosylated RNA-binding protein. Nucleic Acids Res. 21:1993;4210-4217.
27. Vogt P. H., Edelmann A., Kirsch S., Heneguriu O., Hirschmann P., Kiesewetter F., Kohn F. M., Schill W. B., Farah S., Ramos C., Hartmann M., Hartschuh W., Meschede D., Behre H. M., Castel A., Nieschlag E., Weidner W., Grone H-J., Jung A., Engel W., Haidl G. Human Y chromosome azoospermia factor (AZF) mapped to different subregions in Yq11. Hum. Mol. Genet. 5:1996;933-943.
28. Yen P. H., Ellison J., Salido E. C., Mohandas T., Shapiro L. Isolation of a new gene from the distal short arm of the human X chromosome that escapes X-inactivation. Hum. Mol. Genet. 1:1992;47-52.
29. Yen P. H., Chai N. N., Salido E. C. The human autosomal geneDAZLA:Testis specificity and a candidate for male infertility. Hum. Mol. Genet. 12:1996;2013-2017.
30. Yen P. H., Chai N. N., Salido E. C. The humanDAZgenes, a putative male infertility factor on the Y chromosome, are highly polymorphic in the DAZ repeat regions. Mamm. Genome. 8:1997;756-759.
31. Zeisler J., Schaller W., Hirschmann P., Shan Z., Vogt P. H. DAZandSPGY - one or two gene loci in distal Yq11. Report of the Third International Workshop on Y Chromosome Mapping, Heidelberg, 1997. Cytogenet. Cell Genet. 79:1997;1-20.