Binding of double-stranded DNA by Escherichia coli RecA protein monitored by a fluorescent dye displacement assay

Nucleic Acids Research

Volumn 26, Issue 2, 1998, Pages 650-654

  Zaitsev, Eugene N ^a   Kowalczykowski, Stephen C ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

4',6 DIAMIDINO 2 PHENYLINDOLE; DEOXYADENOSINE TRIPHOSPHATE; DEOXYCYTIDINE TRIPHOSPHATE; DEOXYGUANOSINE TRIPHOSPHATE; DOUBLE STRANDED DNA; FLUORESCENT DYE; MUTANT PROTEIN; NUCLEOPROTEIN; RECA PROTEIN; URIDINE TRIPHOSPHATE;

ARTICLE; ESCHERICHIA COLI; FLUORESCENCE; MEASUREMENT; MONITORING; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; STOICHIOMETRY;

ADENOSINE TRIPHOSPHATE; BACTERIOPHAGES; BINDING SITES; BINDING, COMPETITIVE; DEOXYADENINE NUCLEOTIDES; DNA; DNA, VIRAL; DRUG STABILITY; ESCHERICHIA COLI; FLUORESCENT DYES; HYDROGEN-ION CONCENTRATION; INDOLES; KINETICS; MUTATION; OSMOLAR CONCENTRATION; REC A RECOMBINASES; SODIUM CHLORIDE; SPECTROMETRY, FLUORESCENCE;

ESCHERICHIA COLI;

EID: 0032518216     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.2.650     Document Type: Article

References (37)

1. Cox, M.M. (1990) In Revzin, A. (ed.), The Biology of Nonspecific DNA-Protein Interactions. CRC Press, Boca Raton, FL, pp. 171-196.
2. Flory, J. and Radding, C.M. (1982) Cell, 28, 747-756.
3. Egelman, E.H. and Stasiak, A. (1986) J. Mol. Biol., 191, 677-697.
4. Howard-Flanders, P., West, S.C. and Stasiak, A. (1984) Nature (Lond.), 309, 215-220.
5. Silver, M.S. and Fersht, A.R. (1983) Biochemistry, 22, 2860-2866.
6. Menetski, J.P. and Kowalczykowski, S.C. (1985) J. Mol. Biol., 181, 281-295.
7. Menetski, J.P. and Kowalczykowski, S.C. (1987) J. Biol. Chem., 262, 2085-2092.
8. Menetski, J.P. and Kowalczykowski, S.C. (1987) J. Biol. Chem., 262, 2093-2100.
9. Menetski, J.P., Varghese, A. and Kowalczykowski, S.C. (1988) Biochemistry, 27, 1205-1212.
10. Eggleston, A.K., Rahim, N.A. and Kowalczykowski, S.C. (1996) Nucleic Acids Res., 24, 1179-1186.
11. Uhlin, B.E. and Clark, A.J. (1981) J. Bacteriol., 148, 386-390.
12. Griffith, J. and Shores, C.G. (1985) Biochemistry, 24, 158-162.
13. Rehrauer, W.M. and Kowalczykowski, S.C. (1993) J. Biol. Chem., 268, 1292-1297.
14. Kowalczykowski, S.C., Burk, D.L. and Krupp, R.A. (1989) J. Mol. Biol., 207, 719-733.
15. Lauder, S.D. and Kowalczykowski, S.C. (1993) J. Mol. Biol., 234, 72-86.
16. Messing, J. (1983) Methods Enzymol., 101, 20-78.
17. Wilson, W.D., Tanious, F.A., Barton, H.J., Jones, R.L., Fox, K., Wydra, R.L. and Strekowski, L. (1990) Biochemistry, 29, 8452-8461.
18. Kowalczykowski, S.C. and Krupp, R.A. (1987) J. Mol. Biol., 193, 97-113.
19. Menge, K.L. and Bryant, F.R. (1992) Biochemistry, 31, 5151-5157.
20. Menetski, J.P. and Kowalczykowski, S.C. (1989) Biochemistry, 28, 5871-5881.
21. Kowalczykowski, S.C. (1986) Biochemistry, 25, 5872-5881.
22. Kowalczykowski, S.C. (1991) Annu. Rev. Biophys. Biophys. Chem., 20, 539-575.
23. Benedict, R.C. and Kowalczykowski, S.C. (1988) J. Biol. Chem., 263, 15513-20.
24. Trotta, E., D'Ambrosio, E., Del Grosso, N., Ravagnan, G., Cirilli, M. and Paci, M. (1993) J. Biol. Chem., 268, 3944-3951.
25. Matesoi, D., Kittler, L., Bell, A., Unger, E. and Lober, G. (1996) Biochem. Mol. Biol. Int., 38, 123-132.
26. Dombroski, D.F., Scraba, D.G., Bradley, R.D. and Morgan, A.R. (1983) Nucleic Acids Res., 11, 7487-7504.
27. DiCapua, E. and Koller, T. (1987) In Eckstein, F. and Lilley, D.M.J. (eds), Nucleic Acids and Molecular Biology. Springer-Verlag, Berlin, Germany, pp. 174-185.
28. Chabbert, M., Lami, H. and Takahashi, M. (1991) J. Biol. Chem., 266, 5395-5400.
29. Kumar, K.A. and Muniyappa, K. (1992) J. Biol. Chem., 267, 24824-24832.
30. Di Capua, E., Engel, A., Stasiak, A. and Koller, T. (1982) J. Mol. Biol., 157, 87-103.
31. Takahashi, M., Kubista, M. and Norden, B. (1987) J. Biol. Chem., 262, 8109-8111.
32. Pugh, B.F. and Cox, M.M. (1987) J. Biol. Chem., 262, 1326-1336.
33. Volodin, A.A., Shepelev, V.A. and Kosaganov, Y.N. (1982) FEBS Lett., 145, 53-56.
34. Takahashi, M. and Hagmar, P. (1991) FEBS Lett., 279, 270-272.
35. Bianco, P.R. and Weinstock, G.M. (1998) Submitted for publication.
36. Kowalczykowski, S.C. (1991) Biochimie, 73, 289-304.
37. Kowalczykowski, S.C., Clow, J. and Krupp, R.A. (1987) Proc. Natl. Acad. Sci. USA, 84, 3127-3131.