Novel carbazole degradation genes of Sphingomonas CB3: Sequence analysis, transcription, and molecular ecology

Biochemical and Biophysical Research Communications

Volumn 247, Issue 1, 1998, Pages 129-135

  Shepherd, Joanna M ^a,b   Lloyd Jones, Gareth ^a  

^a LANDCARE RESEARCH   (New Zealand)

^b UNIVERSITY OF WAIKATO   (New Zealand)

Author keywords

[No Author keywords available]

Indexed keywords

BIPHENYL; CARBAZOLE DERIVATIVE; DIHYDRODIOL DEHYDROGENASE; HYDROLASE; POLYCYCLIC AROMATIC HYDROCARBON;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL GENE; CATABOLISM; CONTROLLED STUDY; GENE LOCUS; GENE REARRANGEMENT; GENE SEQUENCE; GENETIC TRANSCRIPTION; MOLECULAR BIOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SOIL POLLUTION; SPHINGOMONAS;

BACTERIA (MICROORGANISMS); PROKARYOTA; SPHINGOMONAS;

EID: 0032499602     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1006/bbrc.1998.8750     Document Type: Article

References (36)

1. Williams P. A., Sayers J. R. Biodegradation. 5:1994;195-217.
2. Ouchiyama N., Zhang Y., Omori T., Kodama T. Biosci. Biotech. Biochem. 57:1993;455-460.
3. Gieg L. M., Otter A., Fedorak P. M. Environ. Sci. Technol. 30:1996;575-585.
4. Kimura T., Zhang Y., Kodama T., Omori T. FEMS Microbiol. Lett. 135:1996;65-70.
5. Sato S.-I., Ouchiyama N., Kimura T., Nojiri H., Yamane H., Omori T. J. Bacteriol. 179:1997;4841-4849.
6. Sato S.-I., Nam J.-W., Kasuga K., Nojiri H., Yamane H., Omori T. J. Bacteriol. 179:1997;4850-4858.
7. Shotbolt-Brown J., Hunter D. W. F., Aislabie J. Can. J. Microbiol. 42:1996;79-82.
8. Ausubel F. M., Brent M., Kingstone R. E., Moore D. E., Seidman J. G., Smith J. A., Struhl K. Current Protocols in Molecular Biology. 1989;Wiley, New York.
9. Sambrook J., Fritsch E. F., Maniatis T. Molecular Cloning: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, New York.
10. Wigmore G. J., Bayly R. C., Di Berardino D. J. Bacteriol. 120:1974;31-37.
11. Barthelet M., Whyte L. G., Greer C. W. FEMS Microbiol. Lett. 138:1996;17-22.
12. Lloyd-Jones G., de Jong C., Ogden R. C., Duetz W. A., Williams P. A. Appl. Environ. Microbiol. 60:1994;691-696.
13. Kim E., Zylstra G. J. J. Bacteriol. 177:1995;3095-3103.
14. Balkwill D. L., Drake G. R., Reeves R. H., Fredrickson J. K., White D. C., Ringelberg D. B., Chandler D. P., Romine M. F., Kennedy D. W., Spadoni C. M. Int. J. Syst. Bacteriol. 47:1997;191-201.
15. Asturias J. A., Diaz E., Timmis K. N. Gene. 156:1995;11-18.
16. Pflugmacher U., Averhoff B., Gottschalk G. Appl. Environ. Microbiol. 61:1996;3967-3977.
17. Zylstra G. J., Gibson D. T. J. Biol. Chem. 264:1989;14940-14946.
18. Shine J., Dalgarno L. Nature (London). 254:1975;34-38.
19. Kessler M., Dabbs E. R., Averhoff B., Gottschalk G. Microbiology. 142:1996;3241-3251.
20. Erickson B. D., Mondello F. J. J. Bacteriol. 174:1992;2903-2912.
21. Kimbara K., Hashimoto T., Fukuda M., Koana T., Takagi M., Oishi M., Yano K. J. Bacteriol. 171:1989;2740-2747.
22. Hayase N., Taira K., Furukawa K. J. Bacteriol. 172:1990;1160-1164.
23. Catelani D., Sorlini C., Treccani V. Experientia. 27:1971;1173-1174.
24. Furukawa K., Miyazaki T. J. Bacteriol. 166:1986;392-398.
25. Yates J. R., Mondello F. J. J. Bacteriol. 171:1989;1733-1735.
26. Mondello F. J. J. Bacteriol. 171:1989;1725-1732.
27. Taira K., Hirose J., Hayashida S., Furukawa K. J. Biol. Chem. 267:1992;4844-4853.
28. Hofer B., Backhaus S., Timmis K. N. Gene. 144:1994;9-16.
29. Simon M. J., Osslund T. D., Saunders R., Ensley B. D., Suggs S., Harcourt A., Suen W.-C., Cruden D. L., Gibson D. T., Zylstra G. J. Gene. 127:1993;31-37.
30. Furukawa K., Hirose J., Suyama A., Zaiki T., Hayashida S. J. Bacteriol. 175:1993;5224-5232.
31. Han S., Eltis L. D., Timmis K. N., Muchmore S. W., Bolin J. T. Science. 270:1995;976-980.
32. Happe B., Eltis L. D., Poth H., Hedderich R., Timmis K. N. J. Bacteriol. 175:1993;7313-7320.
33. Resnik S. M, Torok D. S., Gibson D. T. FEMS Microbiol. Lett. 113:1993;297-302.
34. Shepherd, J. M. 1997, University of Waikato, Hamilton, New Zealand.
35. Grosser R. J., Warshawsky D., Vestal J. R. Appl. Environ. Microbiol. 61:1991;3490-3493.
36. Brumley W. C., Brownrigg C. M., Brilis G. M. J. Chromatogr. 558:1991;223-233.