The solution structure of oxidized rat microsomal cytochrome b5

Biochemistry

Volumn 37, Issue 1, 1998, Pages 173-184

  Arnesano, Fabio ^a   Banci, Lucia ^a   Bertini, Ivano ^a   Felli, Isabella C ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B5;

ARTICLE; ELECTRON TRANSPORT; ENZYME ANALYSIS; ENZYME STRUCTURE; MICROSOME; NONHUMAN; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE; RAT; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; ANIMALS; APOPROTEINS; CATTLE; CYTOCHROME B GROUP; CYTOCHROMES B; CYTOCHROMES B5; MAGNETIC RESONANCE SPECTROSCOPY; MICROSOMES, LIVER; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PROTEIN STRUCTURE, SECONDARY; PROTONS; RATS; SEQUENCE HOMOLOGY, AMINO ACID; SOLUTIONS;

EID: 0032488638     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi971896w     Document Type: Article

References (90)

1. Wüthrich, K. (1986) in NMR of Proteins and Nucleic Acids, Wiley, New York.
2. Clore, G. M., and Gronenborn, A. M. (1991) Science 252, 1390-1399.
3. Clore, G. M., and Gronenborn, A. M. (1994) Protein Sci. 3, 372-390.
4. Schmitz, U., and James, T. L. (1992) J. Am. Chem. Soc. 114, 10654-10656.
5. Torda, A. E., Scheek, R. M., and van Gunsteren, W. F. (1990) J. Mol. Biol. 214, 223-235.
6. Torchia, D. A. (1996) in Encyclopedia of Nuclear Magnetic Resonance (Grant, D. M., and Harris, R. K., Eds.) pp 3785-3790, John Wiley and Sons, Chichester, U.K.
7. Wagner, G. (1993) Curr. Opin. Struct. Biol. 3, 748-754.
8. Guss, J. M., Harrowell, P. R., Murata, M., Norris, V. A., and Freeman, H. C. (1986) J. Mol. Biol. 192, 361-387.
9. Scott, R. A., and Mauk, A. G. (1996) in Cytochrome c. A multidisciplinary approach, University Science Books, Sausalito, CA.
10. Banci, L., Bertini, I., Eltis, L. D., Felli, I. C., Kastrau, D. H. W., Luchinat, C., Piccioli, M., Pierattelli, R., and Smith, M. (1994) Eur. J. Biochem. 225, 715-725.
11. Bertini, I., Luchinat, C., and Rosato, A. (1996) Prog. Biophys. Mol. Biol. 66, 43-80.
12. Banci, L., Bertini, I., De la Rosa, M. A., Koulougliotis, D., Navarro, J. A., and Walter, O. (submitted for publication).
13. Banci, L., Bertini, I., Gray, H. B., Luchinat, C., Reddig, T., Rosato, A., and Turano, P. (1997) Biochemistry 36, 9867-9877.
14. Baistrocchi, P., Banci, L., Bertini, I., Turano, P., Bren, K. L., and Gray, H. B. (1996) Biochemistry 35, 13788-13796.
15. Banci, L., Bertini, I., Quacquarini, G., Walter, O., Diaz, A., Hervás, M., and De la Rosa, M. A. (1996) JBIC 1, 330-340.
16. Banci, L., Bertini, I., Dikiy, A., Kastrau, D. H. W., Luchinat, C., and Sompornpisut, P. (1995) Biochemistry 34, 206-219.
17. Bertini, I., Eltis, L. D., Felli, I. C., Kastrau, D. H. W., Luchinat, C., and Piccioli, M. (1995) Chemistry - A European Journal 1, 598-607.
18. Bertini, I., Dikiy, A., Kastrau, D. H. W., Luchinat, C., and Sompornpisut, P. (1995) Biochemistry 34, 9851-9858.
19. Pettigrew, G. W., and Moore, G. R. (1987) in Cytochromes c; Biological Aspects, Springer-Verlag, Berlin.
20. von Bodman, S. B., Schulder, M. A., Jollie, D. R., and Sligar, S. G. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 9443-9447.
21. Mathews, F. S. (1985) Prog. Biophys. Mol. Biol. 45, 1-56.
22. Ito, A., and Sato, R. (1968) J. Biol. Chem. 243, 4922-4923.
23. Spatz, L., and Strittmatter, P. (1971) Proc. Natl. Acad. Sci. U.S.A. 68, 1042-1046.
24. Oshino, N., Imai, Y., and Sato, R. (1971) J. Biochem. (Tokyo) 69, 155-167.
25. Strittmatter, P., Spatz, L., Corcoran, D., Rogers, M. J., Setlow, B., and Redline, R. (1974) Proc. Natl. Acad. Sci. U.S.A. 71, 4565-4569.
26. Hildebrandt, A., and Estabrook, R. W. (1971) Arch. Biochem. Biophys. 143, 66-79.
27. Imai, Y., and Sato, R. (1977) Biochem. Biophys. Res. Commun. 75, 420-426.
28. Hegesh, E., Hegesh, J., and Kaftory, A. (1986) N. Engl. J. Med. 314, 757-761.
29. Strittmatter, P., and Ozols, J. (1966) J. Biol. Chem. 241, 4787-4792.
30. Banci, L., Bertini, I., Ferroni, F., and Rosato, A. (1997) Eur. J. Biochem. 249, 270-279.
31. Marcus, R. A., and Sutin, N. (1985) Biochim. Biophys. Acta 811, 265-275.
32. Bertini, I., Gray, H. B., Lippard, S. J., and Valentine, J. S. (1994) in Bioinorganic Chemistry, University Science Books, Mill Valley, CA.
33. Barbato, G., Ikura, M., Kay, L. E., Pastor, R. W., and Bax, A. (1992) Biochemistry 31, 5269-5278.
34. Ernst, R. R. (1994) Pure Appl. Chem. 66, 1955-1960.
35. Bai, Y. W., Sosnick, T. R., Mayne, L., and Englander, S. W. (1995) Science 269, 192-197.
36. Englander, S. W. (1992) Science 256, 1684.
37. Banci, L., Bertini, I., Bren, K. L., Gray, H. B., Sompornpisut, P., and Turano, P. (1997) Biochemistry 36, 8992-9001.
38. Macura, S., Wüthrich, K., and Ernst, R. R. (1982) J. Magn. Reson. 47, 351-357.
39. Marion, D., and Wüthrich, K. (1983) Biochem. Biophys. Res. Commun. 113, 967-974.
40. Banci, L., Bertini, I., Luchinat, C., Piccioli, M., Scozzafava, A., and Turano, P. (1989) Inorg. Chem. 28, 4650-4656.
41. Bax, A., and Davis, D. G. (1985) J. Magn. Reson. 63, 207-213.
42. Griesinger, C., Otting, G., Wüthrich, K., and Ernst, R. R. (1988) J. Am. Chem. Soc. 110, 7870-7872.
43. Piotto, M., Saudek, V., and Sklenar, V. (1992) J. Biomol. NMR 2, 661-666.
44. Eccles, C., Güntert, P., Billeter, M., and Wüthrich, K. (1991) J. Biomol. NMR 1, 111-130.
45. Güntert, P., Braun, W., and Wüthrich, K. (1991) J. Mol. Biol. 217, 517-530.
46. Mc Connell, H. M. (1972) Proc. Natl. Acad. Sci. U.S.A. 69, 335.
47. Mc Connell, H. M., and McGarvey, B. R. (1973) in NMR of Paramagnetic Molecules, Academic Press, New York.
48. Bertini, I., and Luchinat, C. (1986) in NMR of paramagnetic molecules in biological systems, Benjamin/Cummings, Menlo Park, CA.
49. Bertini, I., and Turano, P. (1994) in NMR of paramagnetic macromolecules, NATO ASI Series (La Mar, G. N., Ed.) Kluwer Academic, Dordrecht.
50. Bertini, I., and Luchinat, C. (1996) in NMR of paramagnetic substances, Coord. Chem. Rev. 150, Elsevier, Amsterdam.
51. Güntert, P., Mumenthaler, C., and Wüthrich, K. (1997) J. Mol. Biol. 273, 283-298.
52. Banci, L., Bertini, I., Bren, K. L., Cremonini, M. A., Gray, H. B., Luchinat, C., and Turano, P. (1996) JBIC 1, 117-126.
53. Banci, L., Bertini, I., Gori Savellini, G., Romagnoli, A., Turano, P., Cremonini, M. A., Luchinat, C., and Gray, H. B. (1997) Proteins: Struct., Funct., Genet. 29, 68-76.
54. Pearlman, D. A., and Case, D. A. (1991) in SANDER: University of California, San Francisco, CA.
55. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
56. Laskowski, R. A., Rullmann, J. A. C., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486.
57. Borgias, B., Thomas, P. D., and James, T. L. (1989) in Complete Relaxation Matrix Analysis (CORMA), University of California, San Francisco, CA.
58. Veitch, N. C., Whitford, D., and Williams, R. J. P. (1990) FEBS Lett. 269, 297-304.
59. Guiles, R. D., Basus, V. J., Sarma, S., Malpure, S., Fox, K. M., Kuntz, I. D., and Waskell, L. (1993) Biochemistry 32, 8329-8340.
60. Guiles, R. D., Basus, V. J., Kuntz, I. D., and Waskell, L. (1992) Biochemistry 31, 11365-11375.
61. Sarma, S., DiGate, R. J., Banville, D., and Guiles, R. D. (1996) J. Biomol. NMR 8, 171-183.
62. Lee, K.-B., La Mar, G. N., Mansfield, K. E., Smith, K. M., Pochapsky, T. C., and Sligar, S. G. (1993) Biochim. Biophys. Acta 1202, 189-199.
63. Banci, L., Bertini, I., Pierattelli, R., and Vila, A. J. (1994) Inorg. Chem. 33, 4338-4343.
64. Banci, L., Pierattelli, R., and Turner, D. L. (1995) Eur. J. Biochem. 232, 522-527.
65. Keller, R. M., and Wüthrich, K. (1980) Biochim. Biophys. Acta 621, 204-217.
66. McLachlan, S. J., La Mar, G. N., Burns, P. D., Smith, K. D., and Langry, K. C. (1986) Biochim. Biophys. Acta 874, 274-284.
67. Mathews, F. S., Argos, P., and Levine, M. (1972) Cold Spring Harbor Symp. Quant. Biol. 36, 387.
68. Durley, R. C. E., and Mathews, F. S. (1996) Acta Crystallogr. D52, 65-72.
69. Rodriguez Maranon, M. J., Qiu, F., Stark, R. E., White, S. P., Zhang, X., Foundling, S. I., Rodriguez, V., Schilling, C. L., Bunce, R. A., and Rivera, M. (1996) Biochemistry 35, 16378-16390.
70. Muskett, F. W., Kelly, G. P., and Whitford, D. (1996) J. Mol. Biol. 258, 172-189.
71. Argos, P., and Mathews, F. S. (1975) J. Biol. Chem. 250, 747-751.
72. Kabsh, W., and Sander, C. (1983) Biopolymers 22, 2577-2637.
73. Oosterhuis, W. T., and Lang, G. (1969) Phys. Rev. 178, 439-456.
74. Emerson, S. D., and La Mar, G. N. (1990) Biochemistry 29, 1556-1566.
75. Salemme, F. R. (1976) J. Mol. Biol. 102, 563-568.
76. Rodgers, K. K., Pochapsky, T. C., and Sligar, S. G. (1988) Science 240, 1657-1659.
77. Northrup, S. H., Thomasson, K. A., Miller, C. M., Barker, P. D., Eltis, L. D., Guillemette, J. G., Inglis, S. C., and Mauk, A. G. (1993) Biochemistry 32, 6613-6623.
78. McLachlan, S. J., La Mar, G. N., and Sletten, E. (1986) J. Am. Chem. Soc. 108, 1285-1291.
79. Mathews, F. S. (1980) Biochim. Biophys. Acta 622, 375-379.
80. Ferrer, J. C., Turano, P., Banci, L., Bertini, I., Morris, I. K., Smith, K. M., Smith, M., and Mauk, A. G. (1994) Biochemistry 33, 7819-7829.
81. Storch, E. M., and Daggett, V. (1995) Biochemistry 34, 9682-9693.
82. Hvidt, A., and Nielsen, S. O. (1966) Adv. Protein Chem. 21, 287.
83. Englander, S. W., and Kallenbach, N. R. (1983) Q. Rev. Biophys. 16, 521-655.
84. Kitagawa, T., Sugiyama, T., and Yamano, T. (1982) Biochemistry 21, 1680-1686.
85. Wendoloski, J. J., Matthew, J. B., Weber, P. C., and Salemme, F. R. (1987) Science 238, 794-797.
86. Guiles, R. D., Sarma, S., DiGate, R. J., Banville, D., Basus, V. J., Kuntz, I. D., and Waskell, L. (1996) Nat. Struct. Biol. 3, 333-339.
87. Qi, P. X., Di Stefano, D. L., and Wand, A. J. (1994) Biochemistry 33, 6408-6417.
88. Rivera, M., Barillas-Mury, C., Christensen, K. A., Little, J. W., Wells, M. A., and Walker, F. A. (1992) Biochemistry 31, 12233-12240.
89. Falzone, C. J., Mayer, M. R., Whiteman, E. L., Moore, C. D., and Lecomte, J. T. J. (1996) Biochemistry 35, 6519-6526.
90. Koradi, R., Billeter, M., and Wüthrich, K. (1996) J. Mol. Graphics 14, 51-55.