Vaccinia virus nucleoside triphosphate phosphohydrolase I is an essential viral early gene transcription termination factor

Virology

Volumn 245, Issue 2, 1998, Pages 360-371

  Christen, Linda M ^a   Sanders, Michelle ^a   Wiler, Christie ^a   Niles, Edward G ^a  

^a UNIVERSITY AT BUFFALO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PHOSPHATASE; VIRUS ENZYME;

AMINO ACID SEQUENCE; ARTICLE; ENZYME ACTIVITY; GENE DELETION; GENE EXPRESSION REGULATION; NONHUMAN; PRIORITY JOURNAL; SITE DIRECTED MUTAGENESIS; TRANSCRIPTION REGULATION; VACCINIA VIRUS; VIRUS MUTATION; VIRUS TRANSCRIPTION;

RNA VIRUSES; VACCINIA; VACCINIA VIRUS;

EID: 0032486254     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1998.9177     Document Type: Article

References (44)

1. Ahn B. Y., Moss B. RNA polymerase-associated transcription specificity factor encoded by vaccinia virus. Proc. Natl. Acad. Sci. USA. 89:1992;3536-3540.
2. Amegadzie B. Y., Ahn B. Y., Moss B. Characterization of a 7-kilodalton subunit of vaccinia virus DNA-dependent RNA polymerase with structural similarities to the smallest subunit of eukaryotic RNA polymerase II. J. Virol. 66:1992;3003-3010.
3. Broyles S. S., Moss B. Homology between RNA polymerases of poxviruses, prokaryotes, and eukaryotes: Nucleotide sequence and transcriptional analysis of vaccinia virus genes encoding 147-kDa and 22-kDa subunits. Proc. Natl. Acad. Sci. USA. 83:1986;3141-3145.
4. Broyles S. S., Moss B. Sedimentation of an RNA polymerase complex from vaccinia virus that specifically initiates and terminates transcription. Mol. Cell. Biol. 7:1987a;7-14.
5. Broyles S. S., Moss B. Identification of the vaccinia virus gene encoding nucleoside triphosphate phosphohydrolase I, a DNA-dependent ATPase. J. Virol. 61:1987b;1738-1742.
6. Condit R. C., Motyczka A. Isolation and preliminary characterization of temperature-sensitive mutants of vaccinia virus. Virology. 113:1981;224-241.
7. Condit R. C., Motyczka A., Spizz G. Isolation, characterization, and physical mapping of temperature-sensitive mutants of vaccinia virus. Virology. 128:1983;429-443.
8. Condit R. C., Lewis J. I., Quinn M., Christen L. M., Niles E. G. Use of lysolecithin-permeabilized infected-cell extracts to investigate the in vitro biochemical phenotypes of poxvirus ts mutations altered in viral transcription activity. Virology. 218:1996;169-180.
9. Deng L., Shuman S. An ATPase component of the transcription elongation complex is required for factor-dependent transcription termination by vaccinia virus RNA polymerase. J. Biol. Chem. 271:1996;29.
10. Deng L., Shuman S. Vaccinia NPH-I, a DEXH-box ATPase, is the energy coupling factor for mRNA transcription termination. Genes Dev. 12:1998;538-546.
11. Deng L., Hagler J., Shuman S. Factor-dependent release of nascent RNA by ternary complexes of vaccinia RNA polymerase. J. Biol. Chem. 271:1996;19556-19562.
12. Diaz-Guerra M., Esteban M. Vaccinia virus nucleoside trihposphate phosphohydrolyase I control early anb late gene expression by regulating the rate of transcription. J. Virol. 67:1993;7561-7572.
13. Dieckmann C. L., Tzagoloff A. Assembly of the mitochrondrial membrane system. CBP6, a yeast nuclear gene necessary for synthesis of cytochrome b. J. Biol. Chem. 260:1985;1513-1520.
14. Dyster L. M., Niles E. G. Genetic and biochemical characterization of vaccinia virus genes D2L and D3R which encode virion structural proteins. Virology. 182:1991;455-467.
15. Ensinger M. J. Isolation and genetic characterization of temperature-sensitive mutants of vaccinia virus WR. J. Virol. 43:1982;778-790.
16. Gorbalenya A. E., Koonin E. V. Helicases: Amino acid sequence comparisons and structure-function relationships. Curr. Opin. Struct. Biol. 3:1993;419-429.
17. Gross C. H., Shuman S. The QRxGRxGRxxxG motif of the vaccinia virus DExH box RNA helicase NPH-II is required for ATP hydrolysis and RNA unwinding but not forRNA binding. J. Virol. 70:1996;170-113.
18. Hagler J., Luo Y., Shuman S. Factor-dependent transcription termination by vaccinia RNA polymerase: Kinetic coupling and requirement for ATP hydrolysis. J. Biol. Chem. 269:1994;10050-10060.
19. Higman M. A., Bourgeois N., Niles E. G. The vaccinia virus mRNA (guanine-N7-)-methyltransferase requires both subunits of the mRNA capping enzyme for activity. J. Biol. Chem. 267:1992;16430-16437.
20. Higman M. A., Christen L. A., Niles E. G. The mRNA (guanine-7-)methyltransferase domain of the vaccinia virus mRNA capping enzyme: Expression inEscherichia coli. J. Biol. Chem. 269:1994;14974-14981.
21. Kahn J., Esteban M. Identification of the two point mutations in two vaccinia virus nucleoside triphosphate phosphohydrolase I temperature-sensitive mutants and role of this DNA-dependent ATPase enzyme in virus gene expression. Virology. 174:1990;459-471.
22. Kunkel T. A., Roberts J. D., Zakour M. A. Rapid and efficient site specific mutagenesis without phenotypic selection. Methods Companion Methods Enzymol. 154:1987;367-382.
23. Kunzi M. S., Traktman P. Genetic evidence for involvement of vaccinia virus DNA-dependent ATPase I in intermediate and late gene expression. J. Virol. 63:1989;3999-4010.
24. Luo Y., Shuman S. RNA binding properties of vaccinia virus capping enzyme. J. Biol. Chem. 268:1993;21253-21262.
25. Martinez R., Shao L., Weller S. K. The conserved helicase motifs of the herpes simplex virus type 1 origin-binding protein UL9 are important for function. J. Virol. 66:1992;6735-6746.
26. Moss B. Poxviridae: The viruses and their replication. Virology. 1996;Lippincott-Raven, Philadelphia.
27. Moss B., Ahn B. Y., Amegadzie B., Gershon P. D., Keck J. G. Cytoplasmic transcription system encoded by vaccinia virus. J. Biol. Chem. 266:1991;1355-1358.
28. Myette J. R., Niles E. G. Characterization of the vaccinia virus RNA 5′-triphosphatase and nucleotide triphosphate phosphohydrolase activities demonstrate that both activities are carried out at the same active site. J. Biol. Chem. 271:1996;11945-11952.
29. Niles E. G., Condit R. C., Caro P., Davidson K., Matusick L., Seto J. Nucleotide sequence and genetic map of the 16-kb vaccinia virusHin. Virology. 153:1986;96-112.
30. Niles E. G., Seto J. Vaccinia virus gene D8 encodes a virion transmembrane protein. J. Virol. 62:1988;3772-3778.
31. Niles E. G., Lee-Chen G. J., Shuman S., Moss B., Broyles S. S. Vaccinia virus gene D12L encodes the small subunit of the viral mRNA capping enzyme. Virology. 172:1989;513-522.
32. Paoletti E., Cooper N., Moss B. Regulation of synthesis of two immunologically distinct nucleic acid-dependent nucleoside triphosphate phosphohydrolases in vaccinia virus-infected HeLa cells. J. Virol. 14:1974;578-586.
33. Pause A., Sonenberg N. Mutational analysis of a DEAD box RNA helicase: The mammalian translation initiation factor eIF-4A. EMBO J. 11:1992;2643-2654.
34. Rodriguez J. F., Kahn J. S., Esteban M. Molecular cloning, endoding sequence, and expression of vaccinia virus nucleic acid-dependent nucleoside triphosphatase gene. Proc. Natl. Acad. Sci. USA. 83:1986;9566-9570.
35. Rohrmann G., Yuen L., Moss B. Transcription of vaccinia virus early genes by enzymes isolated from vaccinia virions terminates downstream of a regulatory sequence. Cell. 46:1986;1029-1035.
36. Rosales R., Harris N., Ahn B. Y., Moss B. Purification and identification of a vaccinia virus-encoded intermediate stage promoter-specific transcription factor that has homology to eukaryotic transcription factor SII (TFIIS) and an additional role as a viral RNA. J. Biol. Chem. 269:1994;14260-14267.
37. Seto J., Celenza L. M., Condit R. C., Niles E. G. Genetic map of the vaccinia virusHin. Virology. 160:1987;110-119.
38. Shuman S., Broyles S. S., Moss B. Purification and characterization of a transcription termination factor from vaccinia virions. J. Biol. Chem. 262:1987;12372-12380.
39. Shuman S., Moss B. Bromouridine triphosphate inhibits transcription termination and mRNA release by vaccinia virions. J. Biol. Chem. 264:1989;21356-21360.
40. Vos J. C., Sasker M., Stunnenberg H. G. Vaccinia virus capping enzyme is a transcription initiation factor. EMBO J. 10:1991;2553-2558.
41. Yuen L., Moss B. Multiple 3′ ends of mRNA encoding vaccinia virus growth factor occur within a series of repeated sequences downstream of T clusters. J. Virol. 60:1986;320-323.
42. Yuen L., Moss B. Oligonucleotide sequence signaling transcriptional termination of vaccinia virus early genes. Proc. Natl. Acad. Sci. USA. 84:1987;6417-6421.
43. Walker J. E., Saraste M., Runswick M. J., Gay N. J. Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J. 1:1982;945-951.
44. Zhang Y., Ahn B.-Y., Moss B. Targeting of a multicomponent transcription apparatus into assembling vaccinia virus particles requires RAP94, an RNA polymerase-associated protein. J. Virol. 68:1994;1360-1370.