Genetic variation and sequence studies of a highly variable short tandem repeat at the D17S976 locus

International Journal of Legal Medicine

Volumn 112, Issue 1, 1998, Pages 50-54

  Klintschar, M ^a   Glock, B ^b   Dauber, E M ^b   Mayr, W R ^b  

^a UNIVERSITY OF GRAZ   (Austria)

^b UNIVERSITY OF VIENNA   (Austria)

Author keywords

D17S976; DNA Sequencing; Forensic DNA typing; Population data; Short tandem repeat

Indexed keywords

DNA;

ALLELE; ARTICLE; AUSTRIA; CAUCASIAN; GENE LOCUS; GENE SEQUENCE; GENETIC VARIABILITY; HETEROZYGOSITY; HUMAN; HUMAN TISSUE; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; TANDEM REPEAT;

ALLELES; AUSTRIA; CHROMOSOME DELETION; CHROMOSOME MAPPING; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GENETICS, POPULATION; HUMANS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; TANDEM REPEAT SEQUENCES; VARIATION (GENETICS);

EID: 0032452774     PISSN: 09379827     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004140050198     Document Type: Article

References (23)

1. Edwards A, Civitello A, Hammond HA, Caskey CT (1991) DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am J Hum Genet 49:746-756
2. Weber JL (1990) Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. Genomics 7:524-530
3. Brinkmann B (1992) The use of STRs in stain analysis. In: Proceedings from the third international symposium on human identification. Promega, Medison, USA, pp 357-373
4. Polymeropoulos MJ, Rath DS, Xiao H, Merril CR (1992) Tetranucleotide repeat polymorphism at the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2). Nucleic Acids Res 20:1432
5. Gill P, Kimpton C, D'Aloja E, Andersen JF, Bär W, Brinkmann B, Holgersson S, Johnsson V, Kloosterman AD, Lareu MV, Nellemann E, Pfitzinger H, Phillips CP, Schmitter H, Schneider PM, Stenersen M (1994) Report of the European DNA profiling group (EDNAP) - towards standardisation of short tandem repeat (STR) loci. Forensic Sci Int 65:51-59
6. Klintschar M, Kozma Z, Al Hammadi N, Abdull Fatah M, Nöhammer C (1998) A study on the short tandem repeat loci HumCD4, HumTHO1, and HumFIBRA in a Yemenian and and Egyptian population sample. Int J Legal Med 111:107-110
7. Allen RC, Graves G, Budowle B (1989) Polymerase chain reaction amplification products separated on rehydratable polyacrylamide gels and stained with silver. Biotechniques 7:736-744
8. Glock B, Schwartz DWM, Schwartz-Jungl EM, Mayr WR (1996) Allelic ladder characterization of the short tandem repeat polymorphism in intron 6 of the lipoprotein lipase gene and its application in an Austrian Caucasian population study. J Forensic Sci 41:579-581
9. DNA recommendations - 1992 report concerning recommendations of the DNA Commission of the International Society for Forensic Haemogenetics relating to the use of PCR-based polymorphisms. Int J Legal Med 105:63-64
10. DNA recommendations - 1994 report concerning further recommendations of the DNA Commission of the International Society for Forensic Haemogenetics relating to the use of PCR-based polymorphisms. Int J Legal Med 105:159-160
11. Bär W, Brinkmann B, Budowle B, Carracedo A, Gill P, Lincoln P, Mayr W, Olaisen B (1997) DNA recommendations - further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. Int J Legal Med 110: 175-176
12. Nomenclature Committee of the International Union of Biochemistry (1985) Nomenclature for incompletely specified bases in nucleic acid sequences. Recommendations 1984. Eur J Biochem 150:1-5
13. Guo SW, Thompson EA (1992) Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48: 361-372
14. Krüger J, Fuhrmann W, Lichte KH, Steffens C (1968) Zur Verwendung des Polymorphismus der sauren Erythrocytenphosphatase bei der Vaterschaftsbegutachtung. Dtsch Z Gerichtl Med 64:127-146
15. Fisher R (1951) Standard calculations for evaluating a blood group system. Heredity 5:95-102
16. Urquhart A, Kimpton CP, Downes TJ, Gill P (1994) Variation in short tandem repeat sequences - a survey of twelve microsatellite loci for use as forensic identification markers. Int J Legal Med 107:13-20
17. Klintschar M, Kubat M (1995) A study of the short tandem repeat systems HUMVWA and HUMTH01 in an Austrian population sample. Int J Legal Med 107:329-330
18. Klintschar M, Neuhuber F (1998) A study on the short tandem repeat system ACTBP2(SE33) in an Austrian population sample. Int J Legal Med 111:46-48
19. Neuhuber F, Klintschar M, Radacher M (1998) A collaborative genetic study on the STR system FGA in two Austrian population samples. Forensic Sci Int 91:1-6
20. Lareu MV, Pestoni C, Schürenkamp M, Rand S, Brinkmann B, Carrancedo A (1996) A highly variable STR at the D12S391 locus. Int J Legal Med 109:134-138
21. Klintschar M, Ricci U, Al Hammadi N, Reichenpfader B, Ebner A, Giovanucci Uzielli ML (1998) Genetic variation at the STR loci D12S391 and CSF1PO in four populations from Austria, Italy, Egypt and Yemen. Forensic Sci Int in press)
22. Puers C, Hammond HA, Jin L, Caskey CT, Schumm JW (1993) Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTHO1 [AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder. Am J Hum Genet 53:953-958
23. Wiegand P, Budowle B, Rand S, Brinkmann B (1993) Forensic validation of the STR systems SE33 and TC11. Int J Legal Med 105:15-320