RNA aptamers that specifically bind to the Ras-binding domain of Raf-1

FEBS Letters

Volumn 441, Issue 2, 1998, Pages 322-326

  Kimoto, Michiko ^a   Sakamoto, Kensaku ^a   Shirouzu, Mikako ^b   Hirao, Ichiro ^c   Yokoyama, Shigeyuki ^a,b,c  

^a UNIVERSITY OF TOKYO   (Japan)

^b INST OF PHYS AND CHEMICAL RESEARCH   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

In vitro selection; Raf 1; Ras; RNA aptamer

Indexed keywords

RAF PROTEIN; RAS PROTEIN;

ARTICLE; BINDING SITE; HUMAN; IN VITRO STUDY; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN RNA BINDING; RNA ANALYSIS; SIGNAL TRANSDUCTION;

BASE SEQUENCE; BIOPOLYMERS; CLONING, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PROTEIN BINDING; PROTO-ONCOGENE PROTEINS C-RAF; RAS PROTEINS; RNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

MAMMALIA;

EID: 0032445969     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(98)01572-5     Document Type: Article

References (44)

1. Daum G., Eisenmann-Tappe I., Fries H.-W., Troppmair J., Rapp U.R. Trends Biochem. Sci. 19:1994;474-480.
2. Avruch J., Zhang X.-F., Kyriakis J.M. Trends Biochem. Sci. 19:1994;279-283.
3. Koide H., Satoh T., Nakafuku M., Kaziro Y. Proc. Natl. Acad. Sci. USA. 90:1993;8683-8686.
4. Moodie S.A., Willumsen B.M., Weber M.J., Wolfman A. Science. 260:1993;1658-1661.
5. Van Alest L., Barr M., Marcus S., Polverino A., Wigler M. Proc. Natl. Acad. Sci. USA. 90:1993;6213-6217.
6. Vojtek A.B., Hollenberg S.M., Cooper J.A. Cell. 74:1993;205-214.
7. Warne P.H., Rodriguez Viciana P., Downward J. Nature. 364:1993;352-355.
8. Zhang X.-F., Settleman J., Kyriakis J.M., Takeuchi-Suzuki E., Elledge S.J., Marshall M.S., Bruder J.T., Rapp U.R., Avruch J. Nature. 364:1993;308-313.
9. Kolch W., Heidecker G., Kochs G., Hummel R., Vahidi H., Mischak H., Finkenzeller G., Marme D., Rapp U.R. Nature. 364:1993;249-252.
10. Carroll M.P., May W.S. J. Biol. Chem. 269:1994;1249-1256.
11. Bourne R.H., Sanders D.A., McCormick F. Nature. 349:1991;117-127.
12. Satoh T., Nakafuku T., Kaziro Y. J. Biol. Chem. 267:1992;24149-24152.
13. Chuang E., Barnard D., Hettich L., Zhang X.-F., Avruch J., Marshall M.S. Mol. Cell. Biol. 14:1994;5318-5325.
14. Hermann C., Martin G.A., Wittinghofer A. J. Biol. Chem. 270:1995;2901-2905.
15. Trahey M., McCormick F. Science. 238:1987;542-545.
16. Kikuchi A., Demo S.D., Ye Z.-H., Chen Y.-W., Williams L.T. Mol. Cell. Biol. 14:1994;7483-7491.
17. Spaargaren M., Bischoff J.R. Proc. Natl. Acad. Sci. USA. 91:1994;12609-12613.
18. Rodriguez-Viciana P., Warne P.H., Dhand R., Vanhaesebroeck B., Gout I., Fry M.J., Waterfield M.D., Downward J. Nature. 370:1994;527-532.
19. Kolch W., Heidecker G., Lloyd P., Rapp U.R. Nature. 349:1991;426-428.
20. Kolch W., Philipp A., Mischak H., Dutil E.M., Mullen T.-M., Feramisco J.R., Meinkoth J.L., Rose D.W. Oncogene. 13:1996;1305-1314.
21. Ellington A.D., Szostak J.W. Nature. 346:1990;818-822.
22. Tuerk C., Gold L. Science. 249:1990;505-510.
23. Conrad R., Kerane L.M., Ellington A.D., Newton A.C. J. Biol. Chem. 269:1994;32051-32054.
24. Bell S.D., Denu J.M., Dixon J.E., Ellington A.D. J. Biol. Chem. 273:1998;14309-14314.
25. Shirouzu M., Morinaka K., Koyama S., Hu C.-D., Hori-Tamura N., Okada T., Kariya K., Kataoka T., Kikuchi A., Yokoyama S. J. Biol. Chem. 273:1998;7737-7742.
26. Koyama S., Chen Y.W., Ikeda M., Muslin A.J., Williams L.T., Kikuchi A. FEBS Lett. 380:1996;113-117.
27. Shirouzu M., Fujita-Yoshigaki J., Ito Y., Koide H., Nishimura S., Yokoyma S. Oncogene. 7:1992;475-480.
28. Ito Y., Yamasaki K., Iwahara J., Terada T., Kamiya A., Shirouzu M., Muto Y., Kawai G., Yokoyama S., Ernest D.L., Markus W., Shibata T., Nishimura S., Miyazawa T. Biochemistry. 36:1997;9109-9119.
29. Hirao, I., Peabody, D.S. and Ellington, A.D. (1998) Mol. Divers. (submitted).
30. Kanai T., Hirohashi S., Noguchi M., Shinoyama Y., Shimosato Y., Noguchi S., Abe O. Jpn. J. Cancer Res. 78:1987;1314-1318.
31. Jaeger J.A., Turner D.H., Zuker M. Methods Enzymol. 183:1989;291-306.
32. Block C., Janknecht R., Herrmann C., Nassar N., Wittinghofer A. Nature Struct. Biol. 3:1996;244-251.
33. Shirouzu M., Koide H., Fujita-Yoshigaki J., Oshio H., Toyama Y., Yamasaki K., Fuhrman S.A., Villafranca E., Kaziro Y., Yokoyama S. Oncogene. 9:1994;2153-2157.
34. Nassar N., Horn G., Herrmann C., Block C., Janknecht R., Wittinghofer A. Nature Struct. Biol. 3:1996;723-729.
35. Emerson S.D., Madison V.S., Palermo R.E., Waugh D.S., Scheffler J.E., Tsao K.-L., Kiefer S.E., Liu S.P., Fry D.C. Biochemistry. 34:1995;6911-6918.
36. Huang L., Weng X., Hofer F., Martin G.S., Kim S.-H. Nature Struct. Biol. 4:1997;609-615.
37. Geyer M., Herrmann C., Wohlgemuth S., Wittinghofer A., Kalbitzer H.R. Nature Struct. Biol. 4:1997;694-699.
38. Huang L., Hofer F., Martin G.S., Kim S.-H. Nature Struct. Biol. 5:1998;422-426.
39. Kubik M.F., Stephans A.W., Schneider D., Marlar R.A., Tasset D. Nucleic Acids Res. 22:1994;2619-2626.
40. Jellinek D., Green L.S., Bell C., Janjic N. Biochemistry. 33:1994;10450-10456.
41. Jellinek D., Green L.S., Bell C., Lynott C.K., Gill N., Vargeese C., Kirschenheuter G., McGee D.P.C., Abesinghe P., Pieken W.A., Shapiro R., Rifkin D.B., Moscatelli D., Janjic N. Biochemistry. 34:1995;11363-11372.
42. Good P.D., Krikos A.J., Li S.X., Bertrand E., Lee N.S., Giver L., Ellington A., Zaia J.A., Rossi J.J., Engelke D.R. Gene Ther. 4:1997;45-54.
43. Charlton J., Sennello J., Smith D. Chem. Biol. 4:1997;809-816.
44. Bless N.M., Smith D., Charlton J., Czermak B.J., Schmal H., Friedl H.P., Ward P.A. Curr. Biol. 7:1997;877-880.