Heterogeneity of ethidium bromide strong binding sites on DNA. Fluorescent and nonfluorescent complexes

Molecular Biology

Volumn 32, Issue 5, 1998, Pages 718-724

  Borisova, O F ^a   Shchyolkina, A K ^a   Karapetyan, A T ^b   Surovaya, A N ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

^b NATIONAL UNIVERSITY OF ARCHITECTURE AND CONSTRUCTION OF ARMENIA   (Armenia)

Author keywords

Adsorption isotherms; Binding constants; EtBr heterogeneous complexes with DNA; Stoichiometry

Indexed keywords

EID: 0032374625     PISSN: 00268933     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (45)

1. Crothers, M.D., Biopolymers, 1968, vol. 6, pp. 575-584.
2. Zasedatelev, A.S., Gurskii, G.V., and Volkenstein, M.V., Mol. Biol., 1971, vol. 5, pp. 245-252.
3. McGhee, J.D. and von Hippel, P.H., J. Mol. Biol., 1974, vol. 86, pp. 469-489.
4. Henderson, J.F., Cancer Res., 1963, vol. 23, pp. 491-495.
5. Richardson, J.P., J. Mol. Biol., 1973, vol. 78, pp. 703-714.
6. Seto, H. and Tomasz, A., Proc. Natl. Acad. Sci. USA, 1977, vol. 74, pp. 296-299.
7. Tanner, R.K. and Cech, T.R., Nucl. Acids Res., 1985, vol. 13, pp. 7741-7758.
8. Berman, H.M. and Joung, P.R., Annu. Rev. Biophys. Bioeng., 1981, vol. 10, pp. 87-114.
9. Neidle, S. and Abraham, Z., CRC Crit. Rev. Biochem., 1984, vol. 17, pp. 73-121.
10. Borisova, O.F., Grechko, V.V., Kuznetsova, N.V., Sakharova, N.K., and Timokhina, G.I., Mol. Biol., 1987, vol. 21, pp. 515-527.
11. Borisova, O.F., Golova, Yu.B., Gottikh, B.P., Zibrov, A.S., Il'icheva, I.A., Lysov, Ju.P., Mamayeva, O.K., Chernov, B.P., Chernyi, A.A., Shchyolkina, A.K., and Florentiev, V.L., J. Biomol. Struct. Dynam., 1991, vol. 8, pp. 1187-1210.
12. Borisova, O.F., Shchyolkina, A.K., Timofeev, E.N., and Florentiev, V.L., Mol. Biol., 1995, vol. 29, pp. 1076-1085.
13. Shchyolkina, A.K., Timofeev, E.N., Borisova, O.F., Il'icheva, I.A., Minyat, E.E., Khomyakova, E.B., and Florentiev, V.L., FEBS Lett., 1994, vol. 339, pp. 113-118.
14. Borisova, O.F., Shchyolkina, A.K., Timofeev, E.N., Tsybenko, S.Yu., Mirzabekov, A.D., and Florentiev, V.L., J. Biomol. Struct. Dynam., 1995, vol. 13. pp. 015-027.
15. Waring, M.J., Biochem. J., 1974, vol. 143. P. 483-486.
16. Mergny, J-L., Duval-Valentin, G., Nguyen, C.-H., Perrouault, L., Faucon, B., and Helene, T., Science, 1992, vol. 256, pp. 1681-1684.
17. Helene, C., Curr. Opin. Biotechnol., 1993, vol. 4, pp. 29-36.
18. Marky, L.A. and Macgregor, R.B., Biochemistry, 1990, vol. 29, pp. 4805-4811.
19. Bauer, W. and Vinograd, J., J. Mol. Biol., 1965, vol. 33, pp. 141-171.
20. Le Pecq, J.-B. and Paoletti, C., J. Mol. Biol., 1967, vol. 27, pp. 87-106.
21. Frank-Kamenetskii, M.D. and Karapetian, A.T., Mol. Biol., 1972, vol. 6, pp. 621-629.
22. Karapetian, A.T., Mehrabian, N.M., Terzikian, G.A., Verdevanian, P.O., Antonian, A.P., Borisova, O.F., and Frank-Kamenetskii, M.D., J. Biomol. Struct. Dynam., 1996, vol. 14, pp. 275-283.
23. Bresloff, D.J. and Crothers, D.M., J. Mol. Biol., 1975, vol. 95, pp. 103-123.
24. Jovin, T.M. and Striker, G., Molecular Biology, Biochemistry and Biophysics, Pecht, J. and Rirler, R., Eds., N.Y.: Springer-Verlag, Berlin-Heidelberg, 1977, vol. 24, pp. 245-281.
25. Madge, D., Elson, E.L., and Webb, W.W., Biopolymers, 1974, vol. 13, pp. 29-61.
26. Mergny, J-L., Collier, D., Rougee, M., Montenay-Garestier, T., and Helene, C., Nucl. Acids Res., 1991, vol. 19, pp. 1521-1526.
27. Scaria, P.V. and Shafer, R.H., J. Biol. Chem., 1991, vol. 266, pp. 5417-5423.
28. Tishchenko, E.I., Karapetian, A.T., and Borisova, O.F, Mol. Biol., 1996, vol. 30, pp. 1370-1377.
29. Bresloff, J.L. and Crothers, M.D., Biochemistry, 1981, vol. 20, pp. 3547-3553.
30. Baguley, B.C. and Falkenhaug, E.-M., Nucl. Acids Res., 1978, vol. 5, pp. 161-171.
31. Chaires, J.B., Priebe, V., Graves, D.E., and Burke, T.G., J. Am. Chem. Soc., 1993, vol. 115, pp. 5360-5364.
32. Record, M.T., Jr., Anderson, C.F., and Lohman, T.M., Q. Rev. Biophys., 1978, vol. 11, pp. 103-178.
33. Drummond, D.S., Simpson-Gildenmeister, V.F.W., and Peacocke, A.R., Biopolymers, 1965, vol. 3, pp. 135-153.
34. Pritchard, N.J., Blake, A., and Peacocke, A.R., Nature, 1966, vol. 212, pp. 1360-1374.
35. Gurskii, G.V., Biophysics, 1966, vol. 11, pp. 737-742.
36. Olmsted, J. and Kearns, D.R., Biochemistry, 1977, vol. 16, pp. 3647-3654.
37. Sobel, H.M., Tsai, C.-C., Jain, S.C., and Gilbert, S.G., J. Mol. Biol., 1977, vol. 144, pp. 333-365.
38. Jain, S.C. and Sobel, H.M., J. Biomol. Struct. Dynam., 1984, vol. 1, pp. 1161-1177.
39. Davies, D.B., Pakhomov, V.I., and Veselkov, A.N., Nucl. Acids Res., 1997, vol. 25, pp. 4523-4533.
40. Muller, W., Crothers, D.H., and Waring, M.J., Eur. J. Biochem., 1973, vol. 39, pp. 223-234.
41. Patel, D.J., Biopolymers, 1977, vol. 16, pp. 2739-2754.
42. Veselkov, A.N. and Dymant, L.N., J. Struct. Khim., 1986, vol. 27, pp. 73-78.
43. Veselkov, A.N., Dymant, L.N., and Baranovskii, S.F., Khim. Fiz., 1986, vol. 5, pp. 1334-1338.
44. Patel, D.J. and Canuel, L.L., Proc. Natl. Acad. Sci. USA, 1976, vol. 73, pp. 3343-3347.
45. Kastrup, R.V., Young, M.A., and Krugh, T.R., Biochemistry, 1978, vol. 17, pp. 4855-4865.