Modified amino acids as probes of helix stability

Methods in Enzymology

Volumn 295, Issue , 1998, Pages 26-41

  Kallenbach, Neville R ^a   Spek, Erik J ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID;

ALPHA HELIX; AMINO ACID ANALYSIS; ARTICLE; CIRCULAR DICHROISM; INFRARED SPECTROSCOPY; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN STABILITY; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

EID: 0032317164     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0076-6879(98)95033-9     Document Type: Article

References (49)

1. L. Pauling, R. B. Corey, and H. R. Branson, Proc. Natl. Acad. Sci. U.S.A. 37, 205 (1951).
2. P. Y. Chou and G. D. Fasman, Biochemistry 13, 211 (1974).
3. P. Hanson, G. Martinez, G. Millhauser, F. Formaggio, M. Crisma, C. Tonolio, and C. Vita, J. Am. Chem. Soc. 118, 271 (1996).
4. R. Srinivasan and G. D. Rose, Proteins 22, 81 (1993).
5. V. Munoz and L. Serrano, Nature Struct. Biol. 1, 399 (1994).
6. C. K. Smith and L. Regan, Science 270, 980 (1995).
7. D. L. Minor and P. S. Kim, Nature 367, 660 (1994).
8. L. G. Presta and G. D. Rose, Science 240, 1632 (1988).
9. J. S. Richardson and D. C. Richardson, Science 240, 1648 (1988).
10. A. Wada, Adv. Biophys. 9, 1 (1976).
11. W. G. J. Hol, Prog. Biophys. Mol. Biol. 45, 149 (1985).
12. S. Padmanabhan, E. J. York, L. Gera, J. M. Stewart, and R. L. Baldwin, Biochemistry 33, 8604 (1994).
13. K. Groebke, P. Renold, K. Y. Tsang, T. A. Allen, K. F. McClure, and D. S. Kemp, Proc. Natl. Acad. Sci. U.S.A. 93, 4025 (1996).
14. R. T. Ingwall, H. A. Scheraga, N. Lotan, A. Berger, and E. Katchalski, Biopolymers 6, 331 (1968).
15. J. S. Thorson, E. Chapman, and P. G. Schultz, J. Am. Chem. Soc. 117, 9361 (1995).
16. A. Chakrabartty, T. Kortemme, S. Padmanabhan, and R. L. Baldwin, Biochemistry 32, 5560 (1993).
17. N. R. Kallenbach, P. C. Lyu, and H. X. Zhou, in "Circular Dichroism and the Conformational Analysis of Biomolecules." Plenum Press, New York, 1996.
18. J. T. Yang, C. S. C. Wu, and H. M. Martinez, Methods Enzymol. 130, 208 (1986).
19. M. C. Manning and R. W. Woody, Biopolymers 31, 569 (1991).
20. W. Shalongo, D. Laxmichaud, and E. Stellwagen, J. Am. Chem. Soc. 116, 2500 (1994).
21. H. W. Zhou, L. A. Hull, N. R. Kallenbach, L. Mayne, Y. Bai, and S. W. Englander, J. Am. Chem. Soc. 116, 6482 (1994).
22. B. H. Zimm and J. K. Bragg, J. Chem. Phys. 31, 526 (1959).
23. L. Lifson and A. Roig, J. Chem. Phys. 34, 1963 (1961).
24. D. C. Poland and H. A. Scheraga, "Theory of Helix-Coil Transitions in Biopolymers." Academic Press, New York, 1970.
25. C. A. Rohl, J. M. Scholtz, E. J. York, J. M. Stewart, and R. L. Baldwin, Biochemistry 31, 1263 (1992).
26. W. Shalongo and E. Stellwagen, Protein Sci. 4, 1161 (1995).
27. D. M. Rothwarf, V. G. Davenport, P. T. Shi, J. L. Peng, and H. A. Scheraga, Biopolymers 39, 531 (1996).
28. G. Allegra, J. Polymer Sci. C 16, 2815 (1967).
29. J. Wojcik, K. H. Altmann, and H. A. Scheraga, Biopolymers 30, 121 (1990).
30. J. M. Scholtz, S. Marqusee, R. L. Baldwin, J. M. Stewart, and D. W. Bolen, Proc. Natl Acad. Sci. U.S.A. 88, 2854 (1991).
31. S. Marqusee and R. L. Baldwin, in "Protein Folding," p. 85. American Association for the Advancement of Science, Washington, DC, 1990.
32. C. A. Rohl, A. Chakrabartty, and R. L. Baldwin, Protein Sci. 5, 2623 (1996).
33. A. Chakrabartty, T. Kortemme, and R. L. Baldwin, Protein Sci. 3, 843 (1994).
34. H. S. Park, W. Shalongo, and E. Stellwagen, Biochemistry 32, 7048 (1993).
35. P. C. Lyu, M. I. Liff, L. A. Marky, and N. R. Kallenbach, Science 250, 669 (1990).
36. K. T. O'Neill and W. F. DeGrado, Science 250, 646 (1990).
37. A. Horovitz, J. M. Matthews, and A. R. Fersht, J. Mol. Biol. 227, 560 (1992).
38. M. Blaber, X. J. Zhang, and B. W. Matthews, Science 260, 1637 (1993).
39. V. W. Cornish, M. I. Kaplan, D. L. Veenstra, P. A. Kollman, and P. G. Schultz, Biochemistry 33, 12022 (1994).
40. N. Lotan, A. Yavon, and A. Berger, Biopolymers 4, 365 (1966).
41. M. Vasquez and H. A. Scheraga, Biopolymers 32, 41 (1988).
42. S. Padmanabhan and R. L. Baldwin, J. Mol. Biol. 219, 135 (1991).
43. P. C. Lyu, J. C. Sherman, A. Chen, and N. R. Kallenbach, Proc. Natl. Acad. Sci. U.S.A. 88, 5317 (1991).
44. T. P. Creamer and G. D. Rose, Proc. Natl. Acad. Sci. U.S.A. 89, 5937 (1992).
45. S. Padmanabhan, E. J. York, J. M. Stewart, and R. L. Baldwin, J. Mol. Biol. 257, 726 (1996).
46. L. Szilak, J. Moitra, D. Krylov, and C. Vinson, Nat. Struct. Biol. 4, 112 (1997).
47. C. H. Lin, C. S. Chen, K. S. Hsu, D. S. King, and P. C. Lyu, FEBS Lett. 407, 243 (1997).
48. C. Tonolio, M. Crisma, F. Formaggio, G. Valle, G. Cavicchioni, G. Precigoux, A. Aubry, and J. Kamphuis, Biopolymers 33, 1061 (1993).
49. M. Goodman and S. Ro, in "Burger's Medicinal Chemistry and Drug Discovery," 5th ed., Vol. 1, p. 803. Wiley, New York, 1995.