메뉴 건너뛰기




Volumn 47, Issue 4, 1998, Pages 654-672

Effects of branch length errors on the performance of phylogenetically independent contrasts

Author keywords

Branch lengths; Brownian motion; Continuous characters; Independent contrasts; Ornstein Uhlenbeck model; Simulations; Speciational model; Type I error

Indexed keywords

ARTICLE; COMPUTER SIMULATION; PHYLOGENY;

EID: 0032226106     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/106351598260653     Document Type: Article
Times cited : (204)

References (40)
  • 1
    • 0031718787 scopus 로고    scopus 로고
    • Random trees and the comparative method: A cautionary tale
    • ABOUHEIF, E. 1998. Random trees and the comparative method: A cautionary tale. Evolution 52:1197-1204.
    • (1998) Evolution , vol.52 , pp. 1197-1204
    • Abouheif, E.1
  • 2
    • 0030619649 scopus 로고    scopus 로고
    • Covariation of life-history traits in lacertid lizards: A comparative study
    • BAUWENS, D., AND R DÍAZ-URIARTE. 1997. Covariation of life-history traits in lacertid lizards: A comparative study. Am. Nat. 149:91-111.
    • (1997) Am. Nat. , vol.149 , pp. 91-111
    • Bauwens, D.1    Díaz-Uriarte, R.2
  • 5
    • 0030336792 scopus 로고    scopus 로고
    • Testing hypotheses of correlated evolution using phylogenetically independent contrasts: Sensitivity to deviations from brownian motion
    • DÍAZ-URIARTE, R., AND T. GARLAND JR. 1996. Testing hypotheses of correlated evolution using phylogenetically independent contrasts: Sensitivity to deviations from Brownian motion. Syst. Biol. 45:27-47.
    • (1996) Syst. Biol. , vol.45 , pp. 27-47
    • Díaz-Uriarte, R.1    Garland T., Jr.2
  • 6
    • 0022203256 scopus 로고
    • Phylogenies and the comparative method
    • FELSENSTEIN, J. 1985. Phylogenies and the comparative method. Am. Nat. 125:1-15.
    • (1985) Am. Nat. , vol.125 , pp. 1-15
    • Felsenstein, J.1
  • 7
    • 0000235172 scopus 로고
    • Rate tests for phenotypic evolution using phyli genetically independent contrasts
    • GARLAND, T., JR. 1992. Rate tests for phenotypic evolution using phyli genetically independent contrasts. Am. Nat. 140:509-519.
    • (1992) Am. Nat. , vol.140 , pp. 509-519
    • Garland T., Jr.1
  • 8
    • 0001334771 scopus 로고
    • Phylogenetic analyses of lizard endurance capacity in relation to body size and body temperature
    • (+ references) (L. J. Vitt and E. R. Pianka, eds.). Princeton Univ. Press, Princeton
    • GARLAND, T., JR. 1994. Phylogenetic analyses of lizard endurance capacity in relation to body size and body temperature. Pages 237-259 (+ references) in Lizard ecology: Historical and experimental perspectives (L. J. Vitt and E. R. Pianka, eds.). Princeton Univ. Press, Princeton.
    • (1994) Lizard Ecology: Historical and Experimental Perspectives , pp. 237-259
    • Garland T., Jr.1
  • 9
    • 0001074628 scopus 로고
    • Why not to do two-species comparative studies: Limitations on inferring adaptation
    • GARLAND, T., JR., AND S. C. ADOLPH. 1994. Why not to do two-species comparative studies: Limitations on inferring adaptation. Physiol. Zool. 67:797-828.
    • (1994) Physiol. Zool. , vol.67 , pp. 797-828
    • Garland T., Jr.1    Adolph, S.C.2
  • 10
    • 0033183783 scopus 로고    scopus 로고
    • Polytomies and independent contrasts: An examination of the bounded degrees of freedom approach
    • In press
    • GARLAND, T., JR., AND R. DÍAZ-URIARTE. In press. Polytomies and independent contrasts: An examination of the bounded degrees of freedom approach. Syst. Biol. 48.
    • Syst. Biol. , pp. 48
    • Garland T., Jr.1    Díaz-Uriarte, R.2
  • 11
    • 12044255022 scopus 로고
    • Phylogenetic analysis of covariance by computer simulation
    • GARLAND, T., JR., A. W. DICKERMAN, C. M. JANIS, AND J. A. JONES. 1993. Phylogenetic analysis of covariance by computer simulation. Syst. Biol. 42:265-292.
    • (1993) Syst. Biol. , vol.42 , pp. 265-292
    • Garland T., Jr.1    Dickerman, A.W.2    Janis, C.M.3    Jones, J.A.4
  • 12
    • 11944256302 scopus 로고
    • Procedures for the analysis of comparative data using phylogenetically independent contrasts
    • GARLAND, T., JR., P. H. HARVEY, AND A. R. IVES. 1992. Procedures for the analysis of comparative data using phylogenetically independent contrasts. Syst. Biol. 41:18-32.
    • (1992) Syst. Biol. , vol.41 , pp. 18-32
    • Garland T., Jr.1    Harvey, P.H.2    Ives, A.R.3
  • 14
    • 0039940568 scopus 로고    scopus 로고
    • An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values
    • In press
    • GARLAND, T. JR., P. E. MIDFORD, AND A. R. IVES. In press. An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values. Am. Zool.
    • Am. Zool.
    • Garland T., Jr.1    Midford, P.E.2    Ives, A.R.3
  • 15
    • 0024975994 scopus 로고
    • The phylogenetic regression
    • GRAFEN, A. 1989. The phylogenetic regression. Phil. Trans. R. Soc. Lond. B 326:119-157.
    • (1989) Phil. Trans. R. Soc. Lond. B , vol.326 , pp. 119-157
    • Grafen, A.1
  • 17
    • 0028178641 scopus 로고
    • What does the comparative method reveal about adaptation?
    • LEROI, A. M., M. R. ROSE, AND G. V. LAUDER. 1994. What does the comparative method reveal about adaptation? Am. Nat. 143: 381-402.
    • (1994) Am. Nat. , vol.143 , pp. 381-402
    • Leroi, A.M.1    Rose, M.R.2    Lauder, G.V.3
  • 18
    • 12044255652 scopus 로고
    • An approach to the analysis of comparative data when a phylogeny is unavailable or incomplete
    • Losos, J. B. 1994. An approach to the analysis of comparative data when a phylogeny is unavailable or incomplete. Syst. Biol. 43:117-123.
    • (1994) Syst. Biol. , vol.43 , pp. 117-123
    • Losos, J.B.1
  • 19
    • 0027950235 scopus 로고
    • Estimating the rate of phenotypic evolution from comparative data
    • MARTINS, E. P. 1994. Estimating the rate of phenotypic evolution from comparative data. Am. Nat. 144:193-209.
    • (1994) Am. Nat. , vol.144 , pp. 193-209
    • Martins, E.P.1
  • 20
    • 0029843512 scopus 로고    scopus 로고
    • Phylogenies, spatial autoregression and the comparative method: A computer simulation test
    • MARTINS, E. P. 1996a. Phylogenies, spatial autoregression and the comparative method: A computer simulation test. Evolution 50:1750-1765.
    • (1996) Evolution , vol.50 , pp. 1750-1765
    • Martins, E.P.1
  • 22
    • 0026054313 scopus 로고
    • Phylogenetic analyses of the correlated evolution of continuous characters: A simulation study
    • MARTINS, E. P., AND T. GARLAND JR. 1991. Phylogenetic analyses of the correlated evolution of continuous characters: A simulation study. Evolution 45:534-557.
    • (1991) Evolution , vol.45 , pp. 534-557
    • Martins, E.P.1    Garland T., Jr.2
  • 23
    • 0002359941 scopus 로고    scopus 로고
    • The statistical analysis of interspecific data: A review and evaluation of comparative methods
    • (E. P. Martins, ed.). Oxford University Press, Oxford
    • MARTINS, E. P., AND T. F. HANSEN. 1996. The statistical analysis of interspecific data: A review and evaluation of comparative methods. Pages 22-75 in Phylogenies and the comparative method in animal behavior (E. P. Martins, ed.). Oxford University Press, Oxford.
    • (1996) Phylogenies and the Comparative Method in Animal Behavior , pp. 22-75
    • Martins, E.P.1    Hansen, T.F.2
  • 24
    • 0030619995 scopus 로고    scopus 로고
    • Phylogenies and the comparative method: A general approach to incorporating phylogenetic information into the analysis of interspecific data
    • MARTINS, E. P., AND T. F. HANSEN. 1997. Phylogenies and the comparative method: A general approach to incorporating phylogenetic information into the analysis of interspecific data. Am. Nat. 149:646-667.
    • (1997) Am. Nat. , vol.149 , pp. 646-667
    • Martins, E.P.1    Hansen, T.F.2
  • 25
    • 0032103765 scopus 로고    scopus 로고
    • Estimating ancestral states of a communicative display: A comparative study of cyclura rock iguanas
    • MARTINS, E. P., AND J. LAMONT. 1998. Estimating ancestral states of a communicative display: A comparative study of Cyclura rock iguanas. Anim. Behav. 55:1685-1706.
    • (1998) Anim. Behav. , vol.55 , pp. 1685-1706
    • Martins, E.P.1    Lamont, J.2
  • 26
    • 0027333480 scopus 로고
    • Historical perspectives in ecology and evolutionary biology: The use of phylogenetic comparative analyses
    • MILES, D. B., AND A. E. DUNHAM. 1993. Historical perspectives in ecology and evolutionary biology: The use of phylogenetic comparative analyses. Ann. Rev. Ecol. Syst. 24:587-619.
    • (1993) Ann. Rev. Ecol. Syst. , vol.24 , pp. 587-619
    • Miles, D.B.1    Dunham, A.E.2
  • 27
    • 0027338498 scopus 로고
    • Seeking the evolutionary regression coefficient: An analysis of what comparative methods measure
    • PAGEL, M. D. 1993. Seeking the evolutionary regression coefficient: An analysis of what comparative methods measure. J. Theor. Biol. 164:191-205.
    • (1993) J. Theor. Biol. , vol.164 , pp. 191-205
    • Pagel, M.D.1
  • 28
    • 0031421806 scopus 로고    scopus 로고
    • Inferring evolutionary processes from phylogenies
    • PAGEL, M. 1998. Inferring evolutionary processes from phylogenies. Zool. Scr. 26:331-348.
    • (1998) Zool. Scr. , vol.26 , pp. 331-348
    • Pagel, M.1
  • 29
    • 0031589930 scopus 로고    scopus 로고
    • Correlated evolution and independent contrasts
    • PRICE, T. 1997. Correlated evolution and independent contrasts. Philos. Trans. R. Soc. Lond. B 352:519-529.
    • (1997) Philos. Trans. R. Soc. Lond. B , vol.352 , pp. 519-529
    • Price, T.1
  • 30
    • 12044252802 scopus 로고
    • Polytomies in comparative analyses of continuous characters
    • PURVIS, A., AND T. GARLAND JR. 1993. Polytomies in comparative analyses of continuous characters. Syst. Biol. 42:569-575.
    • (1993) Syst. Biol. , vol.42 , pp. 569-575
    • Purvis, A.1    Garland T., Jr.2
  • 31
    • 0028161482 scopus 로고
    • Truth or consequences: Effects of phylogenetic accuracy on two comparative methods
    • PURVIS, A., J. L. GITTLEMAN, AND H.-K. LUH. 1994. Truth or consequences: Effects of phylogenetic accuracy on two comparative methods. J. Theor. Biol. 167:293-300.
    • (1994) J. Theor. Biol. , vol.167 , pp. 293-300
    • Purvis, A.1    Gittleman, J.L.2    Luh, H.-K.3
  • 32
    • 0000138568 scopus 로고    scopus 로고
    • Phylogenetic analysis of avian energetics: Passerines and nonpasserines do not differ
    • REYNOLDS, P. S., AND R. M. LEE III. 1996. Phylogenetic analysis of avian energetics: Passerines and nonpasserines do not differ. Am. Nat. 147:735-759.
    • (1996) Am. Nat. , vol.147 , pp. 735-759
    • Reynolds, P.S.1    Lee R.M. III2
  • 33
    • 0030482765 scopus 로고    scopus 로고
    • Applications of phylogenetically independent contrasts: A mixed progress report
    • RICKLEFS, R. E., AND J. M. STARCK. 1996. Applications of phylogenetically independent contrasts: A mixed progress report. Oikos 77:167-172.
    • (1996) Oikos , vol.77 , pp. 167-172
    • Ricklefs, R.E.1    Starck, J.M.2
  • 34
    • 0000335620 scopus 로고
    • Developmental correlates of genome size in plethodontid salamanders and their implications for genome evolution
    • SESSIONS, S. K., AND A. LARSON. 1987. Developmental correlates of genome size in plethodontid salamanders and their implications for genome evolution. Evolution 41:1239-1251.
    • (1987) Evolution , vol.41 , pp. 1239-1251
    • Sessions, S.K.1    Larson, A.2
  • 37
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • (D. M. Hillis, C. Moritz and B. K. Mable, eds.). Sinauer Associates, Sunderland, Massachusetts
    • SWOFFORD, D. L., G. J. OLSEN, P. J. WADDELL, AND D. M. HILLIS. 1996. Phylogenetic inference. Pages 407-514 in Molecular systematics, 2nd edition (D. M. Hillis, C. Moritz and B. K. Mable, eds.). Sinauer Associates, Sunderland, Massachusetts.
    • (1996) Molecular Systematics, 2nd Edition , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 38
    • 0001827042 scopus 로고
    • Comparing methods: Adaptive traits and tests of adaptation
    • (P. Eggleton and R. I. Vane-Wright, eds.). Linnean Society Symposium Series 17. Academic Press, London
    • WENZEL, J. W., AND J. M. CARPENTER. 1994. Comparing methods: Adaptive traits and tests of adaptation. Pages 79-101 in Phylogenetics and ecology (P. Eggleton and R. I. Vane-Wright, eds.). Linnean Society Symposium Series 17. Academic Press, London.
    • (1994) Phylogenetics and Ecology , pp. 79-101
    • Wenzel, J.W.1    Carpenter, J.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.