New tools and resources for analysing protein structures and their interactions

Acta Crystallographica Section D: Biological Crystallography

Volumn 54, Issue 6 I, 1998, Pages 1132-1138

  Luscombe, Nicholas M ^a   Laskowski, Roman A ^b   Westhead, David R ^c   Milburn, Duncan ^a   Jones, Susan ^a   Karmirantzou, Maria ^a   Thornton, Janet M ^a,b,c  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b UNIVERSITY OF LONDON   (United Kingdom)

^c WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEIC ACID; PROTEIN;

AMINO ACID SEQUENCE; CHEMISTRY; COMPUTER PROGRAM; CONFERENCE PAPER; DATA BASE; METABOLISM; MOLECULAR GENETICS; PROTEIN BINDING; PROTEIN CONFORMATION; SEQUENCE HOMOLOGY; STATISTICAL ANALYSIS;

AMINO ACID SEQUENCE; DATA INTERPRETATION, STATISTICAL; DATABASE MANAGEMENT SYSTEMS; MOLECULAR SEQUENCE DATA; NUCLEIC ACIDS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SOFTWARE;

EID: 0032215436     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444998007318     Document Type: Conference Paper

References (25)

1. Bairoch, A. & Boeckmann, B. (1994). Nucleic Acids Res. 22, 3578-3580.
2. Berman, H. M., Olson, W. K., Beveridge, D. L., Westbrook, J., Gelbin, A., Demeny, T., Hsieh, S-H., Srinivasan, A. R. & Schneider, B. (1992). Biophys. J. 63, 751-759.
3. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F. Jr, Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T. & Tasumi, M. (1977). J. Mol. Biol. 112, 535-542.
4. Flores, T. P., Moss, D. S. & Thornton, J. M. (1994). Protein Eng. 7, 31-37.
5. Hogue, C. W. V., Ohkawa, H. & Bryant, S. H. (1996). Trends Biochem, Sci. 21, 226-229.
6. Holm, L. & Sander, C. (1994). Nucleic Acids Res. 22, 3600-3609.
7. Hooft, R. W. W., Vriend, G., Sander, C. & Abola, E. E. (1996). Nature (London), 381, 272.
8. Hubbard, T. J. P., Murzin, A. G., Brenner, S. E. & Chothia, C. (1997) Nucleic Acids Res. 25, 236-239.
9. Hutchinson, E. G. & Thornton, J. M. (1996). Protein Sci. 5, 212-220.
10. Jones, S., Stewart, M., Michie, A. D., Swindells, M. B., Orengo, C. A. & Thornton, J. M. (1998). Protein Sci. 7, 233-242.
11. Jones, S. & Thornton, J. M. (1995). Prog. Biophys. Mol. Biol. 63, 31-65.
12. Jones, S. & Thornton, J. M. (1996). Proc. Natl Acad. Sci. USA, 93, 13-20.
13. King, R D. & Sternberg, M. J. E. (1996). Protein Sci. 5, 2298-2310.
14. Kraulis, P. J. (1991). J. Appl. Cryst. 24, 946-950.
15. Laskowski, R. A., Hutchinson, E. G., Michie, A. D., Wallace, A. C., Jones, M. L. & Thornton, J. M. (1997). Trends Biochem. Sci. 22, 488-490.
16. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
17. Luscombe, N. M., Laskowski, R. A. & Thornton, J. M. (1997). Nucleic Acids Res. 25, 4940-4945.
18. Murzin, A. G., Brenner, S. E., Hubbard, T. & Chothia, C. (1995). J. Mol. Biol. 247, 536-540.
19. Orengo, C. A., Michie, A. D., Jones, S., Swindells, M. B., Jones, D. T. & Thornton, J. M. (1997). Structure, 5, 1093-1108.
20. Parkinson, G., Wilson, C., Gunasekera, A., Ebright, Y. W. & Berman, H. M. (1996). J. Mol. Biol. 260, 395-408.
21. Pearson, W. R. & Lipman, D. J. (1988). Proc. Natl Acad. Sci. USA, 85, 2444-2448.
22. Sayle, R. A. & Milner-White, E. J. (1995). Trends Biochem. Sci. 20, 374-376.
23. Stampf, D. R., Felder, C. E. & Sussman, J. L. (1995). Nature (London), 374, 572-574.
24. Wallace, A. C., Laskowski, R. A. & Thornton, J. M. (1995). Protein Eng. 8, 127-134.
25. Westhead, D. R., Hatton, D. C. & Thornton, J. M. (1998). Trends Biochem. Sci. 23, 35-36.