Probing the backbone dynamics of oxidized and reduced rat microsomal cytochrome b5 via 15N rotating frame NMR relaxation measurements: Biological implications

Biochemistry

Volumn 37, Issue 35, 1998, Pages 12320-12330

  Banci, Lucia ^a   Bertini, Ivano ^a   Cavazza, Christine ^a   Felli, Isabella C ^a   Koulougliotis, Dionysios ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B5; MICROSOME ENZYME; NITROGEN 15;

ANIMAL CELL; ARTICLE; ENZYME ACTIVITY; ESCHERICHIA COLI; MICROSOME; MOLECULAR DYNAMICS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; RAT; SACCHAROMYCES CEREVISIAE;

ANIMALS; CYTOCHROMES B5; ELECTRON TRANSPORT; MICROSOMES, LIVER; MODELS, MOLECULAR; NITROGEN ISOTOPES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; OXIDATION-REDUCTION; PROTEIN CONFORMATION; RATS; THERMODYNAMICS;

ANIMALIA; ESCHERICHIA COLI; MUS; SACCHAROMYCES CEREVISIAE;

EID: 0032167864     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi980885f     Document Type: Article

References (82)

1. Bertini, I., Eltis, L. D., Felli, I. C., Kastrau, D. H. W., Luchinat, C., and Piccioli, M. (1995) Chem.-Eur. J. 1, 598-607.
2. Banci, L., Bertini, I., Eltis, L. D., Felli, I. C., Kastrau, D. H. W., Luchinat, C., Piccioli, M., Pierattelli, R., and Smith, M. (1994) Eur. J. Biochem. 225, 715-725.
3. Banci, L., Bertini, I., Dikiy, A., Kastrau, D. H. W., Luchinat, C., and Sompornpisut, P. (1995) Biochemistry 34, 206-219.
4. Bertini, I., Dikiy, A., Kastrau, D. H. W., Luchinat, C., and Sompornpisut, P. (1995) Biochemistry 34, 9851-9858.
5. Banci, L., Bertini, I., Bren, K. L., Gray, H. B., Sompornpisut, P., and Turano, P. (1997) Biochemistry 36, 8992-9001.
6. Baistrocchi, P., Banci, L., Bertini, I., Turano, P., Bren, K. L., and Gray, H. B. (1996) Biochemistry 35, 13788-13796.
7. Arnesano, F., Banci, L., Bertini, I., and Felli, I. C. (1998) Biochemistry 37, 173-184.
8. Banci, L., Bertini, I., Ferroni, F., and Rosato, A. (1997) Eur. J. Biochem. 249, 270-279.
9. Banci, L., and Pierattelli, R. (1995) in Nuclear magnetic resonance of paramagnetic macromolecules (La Mar, G. N., Ed.) NATO ASI Series, pp 281-296, Kluwer, Dordrecht, The Netherlands.
10. Bertini, I., and Felli, I. C. (1995) Quad. Ing. Chim. Ital. 9, 639-648.
11. Bertini, I., and Rosato, A. (1997) in Molecular Modeling and Dynamics of Bioinorganic Systems (Banci, L., and Comba, P., Eds.) pp 1-19, Kluwer, Dordrecht, The Netherlands.
12. Bertini, I., Gray, H. B., Lippard, S. J., and Valentine, J. S. Eds. (1994) in Bioinorganic Chemistry, University Science Books, Mill Valley, CA.
13. Tainer, J. A., Getzoff, E. D., Alexander, H., Houghten, R. A., Olson, A. J., Lerner, R. A., and Hendrickson, W. A. (1984) Nature 312, 127-134.
14. Mathews, F. S. (1985) Prog. Biophys. Mol. Biol. 45, 1-56.
15. Lederer, F. (1994) Biochimie 76, 674-692.
16. von Bodman, S. B., Schulder, M. A., Jollie, D. R., and Sligar, S. G. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 9443-9447.
17. Ito, A., and Sato, R. (1968) J. Biol. Chem. 243, 4922-4923.
18. Spatz, L., and Strittmatter, P. (1971) Proc. Natl. Acad. Sci. U.S.A. 68, 1042-1046.
19. Strittmatter, P., and Ozols, J. (1966) J. Biol. Chem. 241, 4787-4792.
20. Gray, H. B., and Ellis, W. R., Jr. (1994) in Bioinorganic Chemistry (Bertini, I., Gray, H. B., Lippard, S. J., and Valentine, J. S., Eds.) pp 315-364, University Science Books, Mill Valley, CA.
21. Marcus, R. A., and Sutin, N. (1985) Biochim. Biophys. Acta 811, 265-322.
22. Canters, G. W., and van de Kamp, M. (1992) Curr. Biol. 2, 859-869.
23. Zhou, J. S., and Kostic, N. M. (1992) J. Am. Chem. Soc. 114, 3562-3563.
24. Hake, R., McLendon, G., Corin, A., and Holzschu, D. (1992) J. Am. Chem. Soc. 114, 5442-5443.
25. Peerey, L. M., Brothers, H. M. I., Hazzard, J. T., Tollin, G., and Kostic, N. M. (1991) Biochemistry 30, 9297-9304.
26. Corin, A., McLendon, G., Zhang, Q., Hake, R., Falvo, J., Lu, K. S., Ciccarelli, R. B., and Holzschu, D. (1991) Biochemistry 30, 11585-11595.
27. Walker, M. C., and Tollin, G. (1991) Biochemistry 30, 5546-5555.
28. Burch, A. M., Rigby, S. E. J., Funk, W. D., MacGillivray, R. T. A., Mauk, M. R., Mauk, A. G., and Moore, G. R. (1990) Science 247, 831-833.
29. Mauk, M. R., Mauk, A. G., Weber, P. C., and Matthew, J. B. (1986) Biochemistry 25, 7085-7091.
30. Meyer, T. E., Rivera, M., Walker, F. A., Mauk, M. R., Mauk, A. G., Cusanovich, M. A., and Tollin, G. (1993) Biochemistry 32, 622-627.
31. Wendoloski, J. J., Matthew, J. B., Weber, P. C., and Salemme, F. R. (1987) Science 238, 794-797.
32. Stone, M. J., Chandrasekhar, K., Holmgren, A., Wright, P. E., and Dyson, H. J. (1993) Biochemistry 32, 426-435.
33. Kelley, J. J. I., Caputo, T. M., Eaton, S. F., Laue, T. M., and Bushweller, J. H. (1997) Biochemistry 36, 5029-5044.
34. Hrovat, A., Blümel, M., Löhr, F., Mayhew, S. G., and Rüterjans, H. (1997) J. Biomol. NMR 10, 53-62.
35. Barbato, G., Ikura, M., Kay, L. E., Pastor, R. W., and Bax, A. (1992) Biochemistry 31, 5269-5278.
36. Peng, J. W., Thanabal, V., and Wagner, G. (1991) J. Magn. Reson. 82, 82-100.
37. Peng, J. W., and Wagner, G. (1992) J. Magn. Reson. 98, 308-332.
38. Habazettl, J., Myers, C., Yuan, F., Verdine, G., and Wagner, G. (1996) Biochemistry 35, 9335-9348.
39. Zinn-Justin, S., Berthault, P., Guenneugues, M., and Desvaux, H. (1997) J. Biomol. NMR 10, 363-372.
40. Akke, M., and Palmer, A. G., III (1996) J. Am. Chem. Soc. 118, 911-912.
41. Abragam, A. (1961) in The Principles of Nuclear Magnetism, Oxford University Press, Oxford, U.K.
42. Deverell, C., Morgan, R. E., and Strange, J. H. (1970) Mol. Phys. 18, 553-559.
43. Wennerström, H. (1972) Mol. Phys. 1, 69-80.
44. Davis, D. G., Perlman, M. E., and London, R. E. (1994) J. Magn. Reson., Ser. B 104, 266-275.
45. Akke, M., Liu, J., Cavanagh, J., Erickson, H. P., and Palmer, A. G., III (1998) Nat. Struct. Biol. 5, 55-59.
46. Band, L., Felli, I. C., and Koulougliotis, D. (1998) J. Biomol. NMR (in press).
47. Shaka, A. J., Keeler, J., and Freeman, R. (1983) J. Magn. Reson. 53, 313-340.
48. Morris, G. A., and Freeman, R. (1979) J. Am. Chem. Soc. 101, 760-762.
49. Marion, D., and Wüthrich, K. (1983) Biochem. Biophys. Res. Commun. 113, 967-974.
50. Peng, J. W., and Wagner, G. (1994) Methods Enzymol. 239, 563-596.
51. Guiles, R. D., Basus, V. J., Sarma, S., Malpure, S., Fox, K. M., Kuntz, I. D., and Waskell, L. (1993) Biochemistry 32, 8329-8340.
52. Guiles, R. D., Basus, V. J., Kuntz, I. D., and Waskell, L. (1992) Biochemistry 31, 11365-11375.
53. Marquardt, D. W. (1963) J. Soc. Ind. Appl. Math. 11, 431-441.
54. Press, W. H., Flannery, B. P., Teukolsky, S. A., and Vetterling, W. T. (1988) in Numerical Recipes in C - The Art of Scientific Computing, Cambridge University Press, New York.
55. Palmer, A. G., III, Rance, M., and Wright, P. E. (1991) J. Am. Chem. Soc. 113, 4371-4380.
56. Peng, J. W., and Wagner, G. (1992) Biochemistry 31, 8571-8586.
57. Desvaux, H., Birlirakis, N., Wary, C., and Berthault, P. (1995) Mol. Phys. 86, 1059-1073.
58. James, T. L., Matson, G. B., Kuntz, I. D., and Fisher, R. W. (1977) J. Magn. Reson. 28, 417-426.
59. Kelly, G. P., Muskett, F. W., and Whitford, D. (1997) Eur. J. Biochem. 245, 349-354.
60. Kay, L. E., Torchia, D. A., and Bax, A. (1989) Biochemistry 28, 8972-8979.
61. Bertini, I., and Luchinat, C. (1986) in NMR of paramagnetic molecules in biological systems, Benjamin/Cummings, Menlo Park, CA.
62. Bertini, I., and Luchinat, C. (1996) Coord. Chem. Rev. 150, 1-300.
63. Banci, L., Bertini, I., and Luchinat, C. (1991) in Nuclear and electron relaxation. The magnetic nucleus-unpaired electron coupling in solution, VCH, Weinheim, Germany.
64. Banci, L. (1993) Biol. Magn. Reson. 12, 79-111.
65. Phillips, W. D., McDonald, C. C., Stombaugh, N. A., and Orme-Johnson, W. H. (1974) Proc. Natl. Acad. Sci. U.S.A. 71, 140-143.
66. McLachan, S. J., La Mar, G. N., and Lee, K.-B. (1988) Biochim. Biophys. Acta 957, 430-445.
67. Banci, L., Bertini, I., Gori Savellini, G., Romagnoli, A., Turano, P., Cremonini, M. A., Luchinat, C., and Gray, H. B. (1997) Proteins: Struct., Funct., Genet. 29, 68-76.
68. Felli, I. C., Desvaux, H., and Bodenhausen, G. (1998) J. Biomol. NMR (in press).
69. Storch, E. M., and Daggett, V. (1995) Biochemistry 34, 9682-9693.
70. de Dios, A. C., Pearson, J. G., and Oldfield, E. (1993) Science 260, 1491-1496.
71. Bruschweiler, R., and Wright, P. E. (1994) J. Am. Chem. Soc. 116, 8426-8427.
72. Kitagawa, T., Sugiyama, T., and Yamano, T. (1982) Biochemistry 21, 1680-1686.
73. Newbold, R. J., Hewson, R., and Whitford, D. (1992) FEBS Lett. 314, 419-424.
74. McLachlan, S. J., La Mar, G. N., Burns, P. D., Smith, K. D., and Langry, K. C. (1986) Biochim. Biophys. Acta 874, 274-284.
75. Strittmatter, P., Hackett, C. S., Korza, G., and Ozols, J. (1990) J. Biol. Chem. 265, 21709-21713.
76. Poulos, T. L., and Mauk, A. G. (1983) J. Biol. Chem. 258, 7369-7373.
77. Mauk, M. R., and Mauk, A. G. (1982) Biochemistry 21, 4730-4734.
78. Stayton, P. S., Poulos, T. L., and Sligar, S. G. (1989) Biochemistry 28, 8201-8205.
79. Rodgers, K. K., Pochapsky, T. C., and Sligar, S. G. (1988) Science 240, 1657-1659.
80. Northrup, S. H., Thomasson, K. A., Miller, C. M., Barker, P. D., Eltis, L. D., Guillemette, J. G., Inglis, S. C., and Mauk, A. G. (1993) Biochemistry 32, 6613-6623.
81. Salemme, F. R. (1976) J. Mol. Biol. 102, 563-568.
82. Marmorino, J. L., Auld, D. S., Beiz, D. S., Doyle, D. F., Young, G. B., and Pielak, G. J. (1993) Protein Sci. 2, 1966-1974.