Resected RNA pseudoknots and their recognition by histidyl-tRNA synthetase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 95, Issue 18, 1998, Pages 10431-10436

  Felden, Brice ^a,b   Giegé, Richard ^a  

^a INST DE BIOL MOLEC ET CELLULAIRE   (France)

^b UNIVERSITY OF UTAH SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HISTIDINE TRANSFER RNA LIGASE;

AMINOACYLATION; ARTICLE; ENZYME SUBSTRATE; MOLECULAR MIMICRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; RNA ANALYSIS; RNA CONFORMATION; RNA SEQUENCE; RNA STRUCTURE; STRUCTURE ANALYSIS;

EVOLUTION, MOLECULAR; HISTIDINE-TRNA LIGASE; NUCLEIC ACID CONFORMATION; RNA; SUBSTRATE SPECIFICITY;

ARCHAEA; BACTERIA (MICROORGANISMS); BROME MOSAIC VIRUS; BROMUS;

EID: 0032167630     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.95.18.10431     Document Type: Article

References (45)

1. Giegé, R., Puglisi, J. D. & Florentz, C. (1993) Prog. Nucleic Acid Res. Mol. Biol. 45, 129-206.
2. Saks, M. E., Sampson, J. R. & Abelson, J. N. (1994) Science 263, 191-197.
3. McClain, W. H. (1995) in tRNA: Structure, Biosynthesis and Function, eds. Söll, D. & RajBhandary, U. L. (Am. Soc. Microbiol., Washington, DC), pp. 335-347.
4. Florentz, C. & Giegé, R. (1995) in tRNA: Structure, Biosynthesis and Function, eds. Söll, D. & RajBhandary, U. L. (Am. Soc. Microbiol., Washington, DC), pp. 144-163.
5. Florentz, C., Dreher, T. W., Rudinger, J. & Giegé, R. (1991) Eur. J. Biochem. 195, 229-234.
6. Dreher, T. W., Tsai, C.-H., Florentz, C. & Giegé, R. (1992) Biochemistry 31, 9183-9189.
7. Felden, B., Florentz, C., Westhof, E. & Giegé, R. (1998) Biochem. Biophys. Res. Commun. 243, 426-434.
8. Graffe, M., Dondon, J., Caillet, J., Romby, P., Ehresmann, C., Ehresmann, B. & Springer, M. (1992) Science 255, 994-996.
9. Felden, B., Himeno, H., Muto, A., McCutcheon, J. P., Atkins, J. F. & Gesteland, R. F. (1997) RNA 3, 89-103.
10. Martinis, S. A. & Schimmel, P. (1995) in tRNA: Structure, Biosynthesis and Function, eds. Söll, D. & RajBhandary, U. L. (Am. Soc. Microbiol., Washington, DC), pp. 349-370.
11. Schimmel, P., Giegé, R., Moras, D. & Yokoyama, S. (1993) Proc. Natl. Acad. Sci. USA 90, 8763-8768.
12. Felden, B., Florentz, C., Giegé, R. & Westhof, E. (1994) J. Mol. Biol. 235, 508-531.
13. Himeno, H., Hasegawa, T., Ueda, T., Watanabe, K., Miura, K.-I. & Shimizu, M. (1989) Nucleic Acids Res. 17, 7855-7863.
14. Franklyn, C. & Schimmel, P. (1990) Proc. Natl. Acad. Sci. USA 87, 8655-8659.
15. Rietveld, K., Pleij, C. W. A. & Bosch, L. (1983) EMBO J. 2, 1079-1085.
16. Joshi, R. L., Joshi, S., Chapeville, F. & Haenni, A. L. (1983) EMBO J. 2, 1123-1127.
17. Hall, T. C., Shih, D. S. & Kaesberg, P. (1972) Biochem. J. 129, 969-976.
18. Perret, V., Garcia, A., Puglisi, J. D., Grosjean, H., Ebel, J.-P., Florentz, C. & Giegé, R. (1990) Biochimie 72, 735-744.
19. Uhlenbeck, O. C. & Gumport, R. I. (1982) in The Enzymes, ed. Boyer, P. (Academic, New York), pp. 31-57.
20. Favorova, O. O., Fasiolo, F., Keith, G., Vassilenko, S. K. & Ebel, J.-P. (1981) Biochemistry 20, 1006-1010.
21. Mengual, R. (1977) Thesis (Université Louis Pasteur, Strasbourg, France).
22. Pütz, J., Puglisi, J. D., Florentz, C. & Giegé, R. (1993) EMBO J. 12, 2949-2957.
23. Kolk, M. H., van der Graaf, M., Wijmenga, S. S., Pleij, C. W., Heus, H. A. & Hilbers, C. W. (1998) Science 280, 434-438.
24. Rudinger, J., Florentz, C. & Giegé, R. (1994) Nucleic Acids Res. 22, 5031-5037.
25. ten Dam, E., Pleij, K. & Draper, D. (1992) Biochemistry 31, 11665-11676.
26. Westhof, E. & Jaeger, L. (1992) Curr. Opin. Struct. Biol. 2, 327-333.
27. Massire, C., Gaspin, C. & Westhof, E. (1994) J. Mol. Graphics 12, 201-206.
28. Cheong, C. Varani, G. & Tinoco, I., Jr. (1990) Nature (London) 346, 680-682.
29. Musier-Forsyth, K., Scaringe, S., Usman, N. & Schimmel, P. (1991) Proc. Natl. Acad. Sci. USA 88, 209-213.
30. Ecker, D. J., Vickers, T. A., Bruice, T. W., Freier, S. M., Jenison, R. D., Manoharan, M. & Zounes, M. (1992) Science 257, 958-961.
31. Ahlquist, P., Dasgupta, R. & Kaesberg, P. (1981) Cell 23, 183-189.
32. Sprinzl, M., Horn, C., Brown, M., Ioudovitch, A. & Steinberg, S. (1998) Nucleic Acids Res. 26, 148-153.
33. Felden, B., Florentz, C., McPherson, A. & Giegé, R. (1994) Nucleic Acids Res. 22, 2882-2286.
34. Sissler, M., Giegé, R. & Florentz, C. (1998) RNA 4, in press.
35. Dietrich, A., Kern, D., Bonnet, J., Giegé, R. & Ebel, J.-P. (1976) Eur. J. Biochem. 70, 147-158.
36. Frugier, M., Florentz, C. & Giegé, R. (1994) EMBO J. 13, 2218-2226.
37. Felden, B., Florentz, C., Giegé, R. & Westhof, E. (1996) RNA 2, 201-212.
38. Arnez, J. G., Harris, D. C., Mitschler, A., Rees, B., Francklyn, C. S. & Moras, D. (1995) EMBO J. 14, 4143-4155.
39. Rudinger, J., Felden, B., Florentz, C. & Giegé, R. (1997) Bioorg. Med. Chem. 5/6, 1001-1009.
40. Eriani, G., Delarue, M., Poch, O., Gangloff, J. & Moras, D. (1990) Nature (London) 347, 203-206.
41. Perret, V., Florentz, C. & Giegé, R. (1990) FEBS Lett. 270, 4-8.
42. Dreher, T. W., Rao, A. L. N. & Hall, T. C. (1989) J. Mol. Biol. 206, 425-438.
43. Maizels, N. & Weiner, A. M. (1993) in The RNA World, eds. Gesteland, R. F. & Atkins, J. F. (Cold Spring Harbor, New York), pp. 577-602.
44. Noller, H. F. (1993) in The RNA World, eds. Gesteland, R. F. & Atkins, J. F. (Cold Spring Harbor Lab. Press, Plainview, NY), pp. 137-156.
45. Giegé, R. (1996) Proc. Natl. Acad. Sci. USA 93, 12078-12081.