-
1
-
-
0030994807
-
Analysis of oligonucleotides by HPLC-electrospray ionization mass spectrometry
-
Apffel, A., Chakel, J.A., Fischer, S., Lichtenwalter, K. and Hancock, W.S. (1997) Analysis of oligonucleotides by HPLC-electrospray ionization mass spectrometry. Anal. Chem., 69, 1320-1325.
-
(1997)
Anal. Chem.
, vol.69
, pp. 1320-1325
-
-
Apffel, A.1
Chakel, J.A.2
Fischer, S.3
Lichtenwalter, K.4
Hancock, W.S.5
-
2
-
-
0027438034
-
Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: Analysis by the application of a new sequencing technique
-
Bakin, A. and Ofengand, J. (1993) Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: Analysis by the application of a new sequencing technique. Biochemistry, 32, 9754-9762.
-
(1993)
Biochemistry
, vol.32
, pp. 9754-9762
-
-
Bakin, A.1
Ofengand, J.2
-
3
-
-
85054214571
-
The role of modified nucleosides in tRNA interactions
-
Hatfield, D.L., Lee, B.J. and Pirtle, R.M. (eds) CRC Press, Boca Raton, FL
-
Björk, G.R (1992) The role of modified nucleosides in tRNA interactions. In Hatfield, D.L., Lee, B.J. and Pirtle, R.M. (eds), Transfer RNA in Protein Synthesis. CRC Press, Boca Raton, FL, pp. 23-85.
-
(1992)
Transfer RNA in Protein Synthesis
, pp. 23-85
-
-
Björk, G.R.1
-
4
-
-
0025683270
-
Preparation and enzymatic hydrolysis of DNA and RNA for mass spectrometry
-
Crain, P.F. (1990) Preparation and enzymatic hydrolysis of DNA and RNA for mass spectrometry. Methods Enzymol., 193, 782-790.
-
(1990)
Methods Enzymol.
, vol.193
, pp. 782-790
-
-
Crain, P.F.1
-
5
-
-
0018462013
-
Role of ribothymidine in the thermal stability of transfer RNA as monitored by proton magnetic resonance
-
Davanloo, P., Sprinzl, M., Watanabe, K., Albani, M. and Kersten, H. (1979) Role of ribothymidine in the thermal stability of transfer RNA as monitored by proton magnetic resonance. Nucleic Acids Res., 6, 1571-1581.
-
(1979)
Nucleic Acids Res.
, vol.6
, pp. 1571-1581
-
-
Davanloo, P.1
Sprinzl, M.2
Watanabe, K.3
Albani, M.4
Kersten, H.5
-
6
-
-
0024283910
-
Crosslinking of the anticodon of the P site bound tRNA to C-1400 of E.coli 16S RNA does not require the participation of the 50S subunit
-
Denman, R., Colgan, J., Nurse, K. and Ofengand, J. (1988) Crosslinking of the anticodon of the P site bound tRNA to C-1400 of E.coli 16S RNA does not require the participation of the 50S subunit. Nucleic Acids Res 16, 165-178.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 165-178
-
-
Denman, R.1
Colgan, J.2
Nurse, K.3
Ofengand, J.4
-
7
-
-
16144367498
-
tRNA and mRNA both in the same molecule
-
Felden, B., Atkins, J.F. and Gesteland, R.F. (1996a) tRNA and mRNA both in the same molecule. Nature Struct. Biol., 3, 494.
-
(1996)
Nature Struct. Biol.
, vol.3
, pp. 494
-
-
Felden, B.1
Atkins, J.F.2
Gesteland, R.F.3
-
8
-
-
0030436199
-
Structural organization of Escherichia coli tmRNA
-
Felden, B., Himeno, H., Muto, A., Atkins, J.F. and Gesteland, R.F. (1996b) Structural organization of Escherichia coli tmRNA. Biochimie, 78, 979-983.
-
(1996)
Biochimie
, vol.78
, pp. 979-983
-
-
Felden, B.1
Himeno, H.2
Muto, A.3
Atkins, J.F.4
Gesteland, R.F.5
-
9
-
-
0031014984
-
Probing the structure of the Escherichia coli 10Sa RNA (tmRNA)
-
Felden, B., Himeno, H., Muto, A., McCutcheon, J.P., Atkins, J.F. and Gesteland, R.F. (1997) Probing the structure of the Escherichia coli 10Sa RNA (tmRNA). RNA, 3, 89-104.
-
(1997)
RNA
, vol.3
, pp. 89-104
-
-
Felden, B.1
Himeno, H.2
Muto, A.3
McCutcheon, J.P.4
Atkins, J.F.5
Gesteland, R.F.6
-
10
-
-
0024438708
-
Electrospray ionization for mass spectrometry of large biomolecules
-
Fenn, J.B, Mann, M., Meng, C.K., Wong, S.F. and Whitehouse, C.M. (1989) Electrospray ionization for mass spectrometry of large biomolecules. Science, 246, 64-71.
-
(1989)
Science
, vol.246
, pp. 64-71
-
-
Fenn, J.B.1
Mann, M.2
Meng, C.K.3
Wong, S.F.4
Whitehouse, C.M.5
-
12
-
-
0345642483
-
Matrix-assisted laser desorption/ ionization mass spectrometry (MALDI) of endonuclease digests of RNA
-
Hahner, S., Lüdemann, H.-C., Kirpekar, F., Nordhoff, E., Roepstorff, P., Galla, H.-J. and Hillenkamp, F. (1997) Matrix-assisted laser desorption/ ionization mass spectrometry (MALDI) of endonuclease digests of RNA. Nucleic Acids Res., 25, 1957-1964.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 1957-1964
-
-
Hahner, S.1
Lüdemann, H.-C.2
Kirpekar, F.3
Nordhoff, E.4
Roepstorff, P.5
Galla, H.-J.6
Hillenkamp, F.7
-
13
-
-
0032511223
-
A nickel complex cleaves uridines in folded RNA structures: Application to E.coli tmRNA and related engineered molecules
-
in press
-
Hickerson, R.P., Watkins-Sims, C.D., Burrows, C.J., Atkins, J.F., Gesteland, R.F. and Felden, B. (1998) A nickel complex cleaves uridines in folded RNA structures: application to E.coli tmRNA and related engineered molecules. J. Mol. Biol., in press.
-
(1998)
J. Mol. Biol.
-
-
Hickerson, R.P.1
Watkins-Sims, C.D.2
Burrows, C.J.3
Atkins, J.F.4
Gesteland, R.F.5
Felden, B.6
-
14
-
-
0031584271
-
In vitro trans-translation mediated by alanine-charged 10Sa RNA
-
Himeno, H., Sato, M., Tadaki, T. Fukushima, M., Ushida, C. and Muto, A. (1997) In vitro trans-translation mediated by alanine-charged 10Sa RNA. J. Mol. Biol., 268, 803-808.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 803-808
-
-
Himeno, H.1
Sato, M.2
Tadaki, T.3
Fukushima, M.4
Ushida, C.5
Muto, A.6
-
15
-
-
0015243685
-
Reaction of pseudoundine and inosine with N-cyclohexyl-N-beta-(4-methylmorpholinium)ethylcarbodnmide
-
Ho, N.W.Y. and Gilham, P.T. (1971 ) Reaction of pseudoundine and inosine with N-cyclohexyl-N-beta-(4-methylmorpholinium)ethylcarbodnmide. Biochemistry, 10, 3651-3657.
-
(1971)
Biochemistry
, vol.10
, pp. 3651-3657
-
-
Ho, N.W.Y.1
Gilham, P.T.2
-
16
-
-
0024284965
-
A simple structural feature is a major determinant of the identity of a transfer RNA
-
Hou, Y.-M. and Schimmel, P. (1988) A simple structural feature is a major determinant of the identity of a transfer RNA. Nature, 333, 140-145.
-
(1988)
Nature
, vol.333
, pp. 140-145
-
-
Hou, Y.-M.1
Schimmel, P.2
-
17
-
-
0020286552
-
A small RNA that complements mutants in the RNA processing enzyme ribonuclease P
-
Jain, S.K., Gurevitz, M. and Apirion, D. (1982) A small RNA that complements mutants in the RNA processing enzyme ribonuclease P. J. Mol. Biol., 162, 515-533.
-
(1982)
J. Mol. Biol.
, vol.162
, pp. 515-533
-
-
Jain, S.K.1
Gurevitz, M.2
Apirion, D.3
-
18
-
-
0023851755
-
Purification, structure, and properties of Escherichia coli tRNA pseudouridine synthase I
-
Kammen, H.O., Marvel, C.C., Hardy, L. and Penhoet, E.E. (1988) Purification, structure, and properties of Escherichia coli tRNA pseudouridine synthase I. J. Biol. Chem., 263, 2255-2263.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 2255-2263
-
-
Kammen, H.O.1
Marvel, C.C.2
Hardy, L.3
Penhoet, E.E.4
-
20
-
-
0030024281
-
Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA
-
Keiler, K.C., Waller, P.R.H. and Sauer, R.T. (1996) Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA. Science, 271, 990-993.
-
(1996)
Science
, vol.271
, pp. 990-993
-
-
Keiler, K.C.1
Waller, P.R.H.2
Sauer, R.T.3
-
21
-
-
0028124122
-
A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli
-
Komine, Y., Kitabatake, M., Yokogawa, T., Nishikawa, K. and Inokuchi, H. (1994) A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli. Proc. Natl Acad. Sci. USA, 91, 9223-9227.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 9223-9227
-
-
Komine, Y.1
Kitabatake, M.2
Yokogawa, T.3
Nishikawa, K.4
Inokuchi, H.5
-
22
-
-
0027423649
-
A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry
-
Kowalak, J.A., Pomerantz, S.C., Crain, P.F. and McCloskey, J.A. (1993) A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry. Nucleic Acids Res., 21, 4577-4585.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 4577-4585
-
-
Kowalak, J.A.1
Pomerantz, S.C.2
Crain, P.F.3
McCloskey, J.A.4
-
23
-
-
0017843404
-
Small stable RNAs from Escherichia coli: Evidence for the existence of new molecules and for a new ribonucleoprotein particle containing 6S RNA
-
Lee, S.Y., Bailey, S.C. and Apirion, D. (1978) Small stable RNAs from Escherichia coli: evidence for the existence of new molecules and for a new ribonucleoprotein particle containing 6S RNA. J. Bacteriol., 133, 1015-1023.
-
(1978)
J. Bacteriol.
, vol.133
, pp. 1015-1023
-
-
Lee, S.Y.1
Bailey, S.C.2
Apirion, D.3
-
24
-
-
0024279871
-
Changing the specificity of a tRNA by introducing a G-U wobble pair near the 3′ acceptor end
-
McClain, W.H. and Foss, K. (1988) Changing the specificity of a tRNA by introducing a G-U wobble pair near the 3′ acceptor end. Science, 240, 793-796.
-
(1988)
Science
, vol.240
, pp. 793-796
-
-
McClain, W.H.1
Foss, K.2
-
25
-
-
0000243421
-
Mass spectrometry
-
Ts'o,P.O.P.(ed.) Academic Press, New York
-
McCloskey, J.A. (1974) Mass spectrometry. In Ts'o,P.O.P.(ed.), Basic Principles in Nucleic Acid Chemistry, Vol. I. Academic Press, New York, pp. 209-309.
-
(1974)
Basic Principles in Nucleic Acid Chemistry
, vol.1
, pp. 209-309
-
-
McCloskey, J.A.1
-
26
-
-
0031832046
-
The RNA modification database-1998
-
McCloskey, J.A. and Crain, P.F. (1998) The RNA modification database-1998. Nucleic Acids Res., 26, 196-197.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 196-197
-
-
McCloskey, J.A.1
Crain, P.F.2
-
27
-
-
0029258983
-
Purification, cloning, and properties of the tRNA psi 55 synthase from Escherichia coli
-
Nurse, K., Wrzesinski, J., Bakin, A., Lane, B.G. and Ofengand, J. (1995) Purification, cloning, and properties of the tRNA psi 55 synthase from Escherichia coli. RNA, 1, 102-112.
-
(1995)
RNA
, vol.1
, pp. 102-112
-
-
Nurse, K.1
Wrzesinski, J.2
Bakin, A.3
Lane, B.G.4
Ofengand, J.5
-
28
-
-
0025612935
-
Analysis of RNA hvdrolyzates by LC/MS
-
Pomerantz, S.C. and McCloskey, J.A. (1990) Analysis of RNA hvdrolyzates by LC/MS. Methods Enzymol., 193, 796-824.
-
(1990)
Methods Enzymol.
, vol.193
, pp. 796-824
-
-
Pomerantz, S.C.1
McCloskey, J.A.2
-
29
-
-
33845594472
-
Determination of oligonucleotide composition from mass spectrometrically measured molecular weights
-
Pomerantz, S.C., Kowalak, J.A. and McCloskey, J.A. (1993) Determination of oligonucleotide composition from mass spectrometrically measured molecular weights. J. Am. Soc. Mass Spectrom., 4, 204-2090.
-
(1993)
J. Am. Soc. Mass Spectrom.
, vol.4
, pp. 204-2090
-
-
Pomerantz, S.C.1
Kowalak, J.A.2
McCloskey, J.A.3
-
30
-
-
0030845405
-
Ala: Role of the G3-U70 base pair in synthetase recognition
-
Ala: role of the G3-U70 base pair in synthetase recognition. Nucleic Acids Res., 25, 2083-2090.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2083-2090
-
-
Ramos, A.1
Varani, G.2
-
31
-
-
0018288428
-
Characterization of 10S RNA: A new stable RNA molecule from E. coli
-
Ray, B.K. and Apirion, D. (1979) Characterization of 10S RNA: a new stable RNA molecule from E. coli. Mol. Gen. Genet., 174, 25-32.
-
(1979)
Mol. Gen. Genet.
, vol.174
, pp. 25-32
-
-
Ray, B.K.1
Apirion, D.2
-
32
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl, M., Horn, C., Brown, M. Ioudovitch, A. and Steinberg, S. (1998) Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res., 26, 148-153.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
33
-
-
0016044321
-
Three-dimensional structure of yeast phenylalanine transfer RNA at 3.0 angstroms resolution
-
Suddath, F.L., Quigley, G.J., McPherson, A., Sneden, D., Kim, J.J., Kim, S.H. and Rich, A. (1974) Three-dimensional structure of yeast phenylalanine transfer RNA at 3.0 angstroms resolution. Nature, 248, 20-24.
-
(1974)
Nature
, vol.248
, pp. 20-24
-
-
Suddath, F.L.1
Quigley, G.J.2
McPherson, A.3
Sneden, D.4
Kim, J.J.5
Kim, S.H.6
Rich, A.7
-
35
-
-
0028906813
-
C-terminal extension of truncated recombinant proteins in Escherichia coli with 10Sa RNA decapeptide
-
Tu, G.F., Reid, G.E., Zhang, J.G., Moritz, R.L. and Simpson, R.J. (1995) C-terminal extension of truncated recombinant proteins in Escherichia coli with 10Sa RNA decapeptide. J. Biol. Chem., 270, 9322-9326.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 9322-9326
-
-
Tu, G.F.1
Reid, G.E.2
Zhang, J.G.3
Moritz, R.L.4
Simpson, R.J.5
-
36
-
-
0028170454
-
tRNA-like structures in 10Sa RNAs of Mycoplasma capricolum and Bacillus subtilis
-
Ushida, C., Himeno, H., Watanabe, T. and Muto, A. (1994) tRNA-like structures in 10Sa RNAs of Mycoplasma capricolum and Bacillus subtilis. Nucleic Acids Res., 22, 3392-3396.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3392-3396
-
-
Ushida, C.1
Himeno, H.2
Watanabe, T.3
Muto, A.4
-
37
-
-
0029907105
-
Phylogenetic analysis of tmRNA secondary structures
-
Williams, K.P. and Bartel, D.P. (1996) Phylogenetic analysis of tmRNA secondary structures. RNA, 2, 1306-1310.
-
(1996)
RNA
, vol.2
, pp. 1306-1310
-
-
Williams, K.P.1
Bartel, D.P.2
-
39
-
-
0031803837
-
The tmRNA database (tmRNA)
-
Zweib, C., Larsen, N. and Wower, J. (1998) The tmRNA database (tmRNA). Nucleic Acids Res., 26, 166-167.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 166-167
-
-
Zweib, C.1
Larsen, N.2
Wower, J.3
|