Disease resistance gene homologs correlate with disease resistance loci of Arabidopsis thaliana

Plant Journal

Volumn 14, Issue 4, 1998, Pages 467-474

  Speulman, Etly ^a,d   Bouchez, David ^b   Holub, Eric B ^c   Beynon, Jim L ^a,c  

^a IMPERIAL COLLEGE LONDON   (United Kingdom)

^b CEMAGREF   (France)

^c UNIVERSITY OF WARWICK   (United Kingdom)

^d WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CLONED GENE; CLONING; DISEASE RESISTANCE; GENE CLUSTER; GENE HOMOLOG; HYDROPHOBIC DOMAIN; IDENTIFICATION; NITROGEN; NUCLEOTIDE BINDING SITE; OLIGONUCLEOTIDE PRIMER; PLANT GENOME; RESISTANCE GENE; TOBACCO;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, YEAST; CLONING, MOLECULAR; CONSERVED SEQUENCE; GENE LIBRARY; GENETIC MARKERS; GENOME, PLANT; IMMUNITY, NATURAL; LINKAGE (GENETICS); MOLECULAR SEQUENCE DATA; PLANT DISEASES; PLANT PROTEINS; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; NICOTIANA TABACUM;

EID: 0032078760     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1998.00138.x     Document Type: Article

References (39)

1. Adam, L. and Somerville, S.C. (1996) Genetic characterization of five powdery mildew disease resistance loci m Arabidopsis thaliana. Plant J. 9, 341-356.
2. Bent, A.F., Kunkel, B.N., Dahlbeck, D., Brown, K.L., Schmidt, R., Giraudat, J., Leung, J. and Staskawicz, B. J. (1994) RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes. Science, 265, 1856-1860.
3. Botella, M.A., Coleman, M.J., Hughes, D.E., Nishimura, M.T., Jones, J.D.G. and Somerville, S.C. (1997) Map positions of 47 Arabidopsis sequences with sequence similarity to disease resistance genes. Plant J. 12, 1197-1211.
4. Creusot, F., Fouilloux, E., Dron, M. et al. (1996) The CIC library: a large insert YAC library for genome mapping in Arabidopsis thaliana. Plant J. 8, 763-770.
5. Crute, I.R., Holub, E.B. and Beynon, J.L (1994) Phenotypic variation and non-allelic interaction in the gene-for-gene relationship between Arabidopsis thaliana and Peronospera parasitica (downy mildew). In Advances in Molecular Genetics of PlantMicrobe Interactions, 3 (Daniels, M.J., Downie, J.A. and Osbourn, A.E., eds). Dordrecht, The Netherlands: Kluwer Academic Publishers, pp 267-272.
6. Crute, I.R., Holub, E.B., Tör, M., Brose, E. and Beynon, J.L. (1993) The identification and mapping of loci in Arabidopsis thaliana for recognition of the fungal pathogens Peronospera parasitica (downy mildew) and Albugo Candida (white blister). In Advances in Molecular Genetics of Plant-Microbe Interactions, 2 (Wester, E.W. and Verma, D.P.S., eds). Dordrecht, The Netherlands: Kluwer Academic Publishers, pp 437-444.
7. Debener, T., Lehnackers, H., Arnold, M. and Dangl, J.L. (1991) Identification and molecular mapping of a single Arabidopsis thaliana locus determining resistance to a phytopathogenic Pseudomonas syringae isolate. Plant J. 1, 289-302.
8. Dempsey, D.A., Pathirana, M.S., Wobbe, K.K. and Klessig, D.F. (1997) Identification of an Arabidopsis locus required for resistance to turnip crinkle virus. Plant J. 11, 301-311.
9. Gibson, S.I. and Somerville, C. (1992) Chromosome walking in Arabidopsis thaliana using Yeast Artificial Chromosomes. In Methods in Arabidopsis research, (Koncz, C., Chua, N.-H. and Schell, J., eds). Singapore: World Scientific, pp 119-143.
10. Grant, M.R., Godiard, L., Straube, E., Ashfield, T., Lewald, J., Sattler, A., Innes, R.W. and Dangl, J.L. (1995) Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance. Science, 269, 843-846.
11. Holub, E., Beynon, J.L. and Crute, I.R. (1994) Phenotypic and Genotypic Characterization of Interactions between isolates of Peronospera parasitica and accessions of Arabidopsis thaliana. MPM1, 7, 223-239.
12. Holub, E.B. (1997) Organization of resistance genes in Arabidopsis. In The gene-for-gene relationship in plant-parasite interactions, (Crute, I.R., Holub, E.B. and Burdon, J.J., ed). Wallingford, UK: CAB International, pp 5-26.
13. Holub, E.B. and Beynon, J.L. (1997) Symbiology of mouse-ear cress (Arabidopsis thaliana) and oomycetes. Advance in Botanical Research. 24, 227-273.
14. Holub, E.B., Brose, E., Tör, M., Clay, C., Crute, I.R. and Beynon, J.L. (1995) Phenotypic and genotypic variation in the interaction between Arabidopsis thaliana and Albugo Candida. MPM1, 8, 916-928.
15. Jones, D.A., Thomas, C.M., Hammond-Kosack, K.E., Balint-Kurti, P.J. and Jones, J.D.G. (1994) Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science, 266, 789-793.
16. Kanazin, V., Marek, L.F. and Shoemaker, R.C. (1996) Resistance gene analogs are conserved and clustered in soybean. Proc. Natl Acad. Sci. USA. 93, 11746-11750.
17. Kobe, B. and Deisenhofer, J. (1994) The leucine-rich repeat: a versatile binding motif. TIBS, 19, 415-421.
18. Kunkel, B. (1996) A useful weed put to work: genetic analysis of disease resistance in Arabidopsis thaliana. TIG, 12, 63-69.
19. Kunkel, B.N. (1993) RPS2, an Arabidopsis disease resistance locus specifying recognition of Pseudomonas syringae strains expressing the avirulence gene avrRpt2. Plant Cell, 5, 865-875.
20. Lawrence, G.J., Finnegan, E.J., Ayliffe, M.A. and Eltis, J.G. (1995) The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene N. Plant Cell, 7, 1195-1206.
21. Leisner, S.M., Turgeon, R. and Howell, S.H. (1993) Effects of host plant development and genetic determinants on the long-distance movement of cauliflower mosaic virus in Arabidopsis. Plant Cell, 5, 191-202.
22. Leister, D., Ballvora, A., Salamini, F. and Gebhardt, C. (1996) A PCR based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nature Genetics, 14, 421-430.
23. Lister, C. and Dean, C. (1996) The latest RI map using Lister and Dean RI lines. Weeds World, 3, 1-6.
24. Mindrinos, M., Katagiri, F., Yu, G.-L. and Ausubel, F.M. (1994) The A.thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats. Cell, 78, 1089-1099.
25. Parker, J.E., Coleman, M.J., Szabo, V., Frost, L.N., Schmidt, R., Van der Biezen, E.A., Moores, T., Dean, C., Daniels, M. and Jones, J.D.G. (1997) The Arabidopsis Downy Mildew resistance gene Rpp5 shares similarity to the Toll and lnterleukin-1 receptors with N and L6. Plant Cell, 9, 879-894.
26. Parker, J.E., Szabo, V., Staskawicz, B.J., Lister, C., Dean, C., Daniels, M.J. and Jones, J.D.G. (1993) Phenotypic characterization and molecular mapping of the Arabidopsis thaliana locus RPP5, determining disease resistance to Peronospera parasitica. Plant J. 4, 821-831.
27. Reignault, P., Frost, L.N., Richardson, H., Daniels, M.J., Jones, J.D.G. and Parker, J.E. (1996) Four Arabidopsis RPP loci controlling resistance to the Noco2 isolate of Peronospera parasitica map to regions known to contain other RPP Recognition specificities. MPMI, 9, 464-473.
28. Saraste, M., Sibbald, P.R. and Wittinghofer, A. (1990) The P-loop -a common motif in ATP- and GTP-binding proteins. TIBS. 15, 430-434.
29. Schmidt, R., Love, K., West, J., Lenehan, Z. and Dean, C. (1997) Description of 31 YAC contigs spanning the majority of Arabidopsis thaliana chromosome 5. Plant J. 11, 563-573.
30. Schmidt, R., West, J., Cnops, G., Love, K., Balestrazzi, A. and Dean, C. (1996) Detailed description of four YAC contigs representing 17 Mb of chromosome 4 of Arabidopsis thaliana ecotype Columbia. Plant J. 9, 755-765.
31. Simonich, M.T. and Innes, R.W. (1995) A disease resistance gene in Arabidopsis with specificity for the avrPph3 gene of Pseudomonas syringae pv.phaseolicola. MPMI, 8, 637-640.
32. Song, W.-Y., Wang, G.-L., Chen, L.-L.et al. (1995) A receptor kinaselike protein encoded by the rice disease resistance gene, Xa21. Science, 270, 1804-1806.
33. Speulman, E. and Salamini, F. (1995) GA3-regulated cDNAs from Hordeum vulgare leaves. Plant Mol. Biol. 28, 915-926.
34. Tör, M., Holub, E.B., Brose, E., Musker, R., Gunn, N., Canan, C., Crute, I.R. and Beynon, J.L. (1994) Map positions of three loci in Arabidopsis thaliana associated with isolate-specific recognition of Peronospera parasitica (Downy Mildew). MPMI, 7, 214-222.
35. Traut, T.W. (1994) The functions and consensus motifs of nine types of peptide segments that form differnt types of nucleotide-binding sites. Eur. J. Biochem. 222, 9-19.
36. Whitham, S., Dinesh-Kumar, S.P., Choi, D., Hehl, R., Corr, C. and Baker, B. (1994) The product of the tobacco mosaic virus resistance gene N: similarity to Toll and the lnterleukin-1 receptor. Cell. 78, 1101-1115.
37. Xia, S., Ellwood, S., Findlay, K., Oliver, R.P. and Turner, J.G. (1997) Characterization of three loci controlling resistance of Arabidopsis thaliana Ms-0 to two powdery mildew diseases. Plant J. 12, 757-769.
38. Yu, Y.G., Buss, G.R. and Maroof, M.A.S. (1996) Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site. Proc. Natl Acad. Sci. USA. 93, 11751-11756.
39. Zachgo, E.A., Wang, M.L., Dewdney, J., Bouchez, D., Carnilleri, C., Belmonte, S., Huang, L, Dolau, M. and Goodman, H.M. (1996) A physical map of chromosome 2 of Arabidopsis thaliana. Genome Research, 6, 19-25.