Triple helices formed at oligopyrimidine·oligopurine sequences with base pair inversions: Effect of a triplex-specific ligand on stability and selectivity

Nucleic Acids Research

Volumn 26, Issue 9, 1998, Pages 2179-2183

  Kukreti, Shrikant ^a   Sun, Jian Sheng ^a   Loakes, David ^b   Brown, Daniel M ^b   Nguyen, Chi Hung ^c   Bisagni, Emile ^c   Garestier, Thérèse ^a   Helene, Claude ^a  

^a MUSÉUM NATIONAL D'HISTOIRE NATURELLE   (France)

^b MRC LABORATORY OF MOLECULAR BIOLOGY   (United Kingdom)

^c INSTITUT CURIE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE; PURINE; PYRIMIDINE;

ARTICLE; BASE PAIRING; CONTROLLED STUDY; DNA BINDING; DNA SEQUENCE; GENETIC SELECTION; GENETIC STABILITY; PRIORITY JOURNAL; TRIPLE HELIX;

DNA; HYDROGEN BONDING; INDOLES; INVERSION, CHROMOSOME; LIGANDS; NUCLEIC ACID CONFORMATION; OLIGONUCLEOTIDES; PURINES; PYRIDINES; PYRIMIDINES;

EID: 0032077476     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.9.2179     Document Type: Article

References (52)

1. Hélène, C. (1991) Anti-Cancer Drug Des. 6, 569-584.
2. Maher, L.J. (1996) Cancer Invest. 14, 66-82.
3. François, J.C., Saison-Behmoaras, T., Thuong, N.T. and Hélène, C. (1989) Biochemistry 28, 9617-9619.
4. Maher, L.H., III, Wold, B. and Dervan, P.B. (1989) Science 245, 725-730.
5. Cooney, M., Czernuszewicz, G., Postel, E.H., Flint, S.J. and Hogan, M.E. (1988) Science 241, 456-459.
6. Young, S.L., Krawczyk, S.H., Matteucci, M.D. and Toole, J.J. (1991) Proc. Natl. Acad. Sci. USA 88, 10023-10026.
7. Maher, L.J., Dervan, P.V. and Wold, B. (1992) Biochemistry 31, 70-81.
8. Duval-Valentin, G., Thuong, N.T. and Hélène, C. (1992) Proc. Natl. Acad. Sci. USA, 89, 504-508.
9. Grigoriev, M., Praseuth, D., Robin, P., Hemar, A., Saison-Behmoaras, T., Dautsy-Varsat, A., Thuong, N.T., Hélène, C. and Harel-Bellan, A. (1992) J. Biol. Chem. 267, 3389-3395.
10. Le Doan T., Perrouault, L., Praseuth, D., Habhoub, N., Decout, J.L., Thuong, N.T., Lhomme, J. and Hélène, C. (1987) Nucleic Acids Res. 15, 7749-7760.
11. Moser, H.E. and Dervan, P.B. (1987) Science 238, 645-650.
12. Sun, J.S., Garestier, T. and Hélène, C. (1996) Curr. Opin. Struct. Biol. 6, 327-333.
13. Rajagopal, P. and Feigon, J. (1989) Nature 339, 637-640.
14. De Los Santos, C., Rosen, M. and Patel, D. (1989) Biochemistry 28, 7282-7289.
15. Beal, P.A. and Dervan, P.B. (1991) Science 251, 1360-1363.
16. Pilch, D.S., Levenson, C. and Shafer, R.H. (1991) Biochemistry 30, 6081-6087.
17. Sun, J.S., De Bizemont, T., Duval-Valentin, G., Garestier, T. and Hélène, C. (1991) C.R. Acad. Sci. Paris Ser III 313, 585-590.
18. de Bizemont, T., Duval-Valentine, G., Sun, J.S., Bisagni, E., Garestier, T. and Hélène, C. (1996) Nucleic Acids Res. 24, 1136-1143.
19. Giovannangeli, C., Garestier, T., Thuong, N.T. and Hélène, C. (1992) Proc. Natl. Acad. Sci. USA 89, 8631-8635.
20. Scaria, P.V. and Shafer, R.H. (1991) J. Biol. Chem. 266, 5417-5423.
21. Mergny, J.L., Collier, D., Rougée, M., Motenay-Garestier, T. and Hélène, C. (1991) Nucleic Acids Res. 19, 1521-1526.
22. Mergny, J.L., Duval-Valentin, G., Nguyen, C.H., Perrouault, L., Faucon, B., Rougée, M., Montenay-Garestier, T., Bisagni, E. and Hélène, C. (1992) Science 256, 1681-1684.
23. Pilch, D.S., Martin, M.T., Nguyen, C.H., Sun, J.S., Bisagni, E., Garestier, T. and Hélène, C. (1993) J. Am. Chem. Soc. 115, 9942-9951.
24. Lee, J.S., Latimer, L.J.P. and Hampel, K.J. (1993) Biochemistry 32, 5591-5597.
25. Wilson, W.D., Mizan, S., Tanious, F.A. and Yao, S. (1994) J. Mol. Recog. 7, 89-98.
26. Fox, K.R., Polucci, P., Jenkins, T.C. and Neidle, S. (1995) Proc. Natl. Acad. Sci. USA 92, 7887-7891.
27. Wilson, W.D., Tanious, F.A., Mizan, S., Yao, S., Kiselyov, A.S., Zon, G. and Strekowski, L. Biochemistry 32, 10614-10621
28. Escudé, C., Nguyen, C.H., Mergny, J.L., Sun, J.S., Bisagni, E., Garestier, T. and Hélène, C. (1995) J. Am. Chem. Soc. 117, 10212-10219.
29. Escudé, C., Sun, J.-S., Nguyen, C.H., Bisagni, E., Garestier, T. and Hélène, C. (1996) Biochemistry 35, 5735-5740.
30. Griffin, L.C. and Dervan, P.B. (1989) Science 245, 967-971.
31. Belotserkovskii, B.P., Veselkov, A.G., Filippov, S.A., Dobrynin, V.N., Mirkin, S.M. and Frank-Kamenetskii, M.D. (1990) Nucleic Acids Res. 18, 6621-6624.
32. Mergny, J.L., Sun, J.S., Rougée, M., Montenay-Garestier, T., Barcelo, F., Chomilier, J. and Hélène, C. (1991) Biochemistry 30, 9791-9798.
33. Roberts, R.W. and Crothers, D.M. (1991) Proc. Natl. Acad. Sci. USA 88, 9397-9401.
34. Yoon, K., Hobbs, C.A., Koch, J., Sardaro, M., Kunty, R. and Weis, A.L. (1992) Proc. Natl. Acad. Sci. USA 89, 3840-3844.
35. Wang, E., Koshlap, K.M., Gillespie, P., Dervan, P.B. and Feigon, J. (1996) J. Mol. Biol. 257, 1052-1069.
36. Zhou, B.W., Puga, E., Sun, J.S., Garestier, T. and Hélène, C. (1995) J. Am. Chem. Soc. , 117, 10425-10428.
37. Kukreti, S., Sun, J.S., Garestier, T. and Hélène, C. (1997) Nucleic Acids Res. 25, 4264-4270.
38. Kong Thoo Lin, P. and Brown, D.M. (1989) Nucleic Acids Res. 17, 10373-10383.
39. Nedderman, A.N.R., Stone, M.J., Williams, D.H., Kong Thoo Lin, P. and Brown, D.M. (1993) J. Mol. Biol. 230, 1068-1076.
40. Brown, D.M., Hewlins, M.J.E. and Schell, P. (1968) J. Chem. Soc. (C), 1925-1929.
41. Brown, D.M. and Kong Thoo Lin, P. (1991) Carbohydrate Res. 216, 129-139.
42. Hill, F., Williams, D.M., Loakes, D. and Brown, D.M. (1998) Nucleic Acids Res. 26, 1144-1149.
43. Loakes, D. and Brown, D.M. (1994) Nucleic Acids Res. 22, 4039-4043.
44. Bergstrom, D.E., Zhang, P., Toma, P.H., Andrews, P.C. and Nichois, R. (1995) J. Am. Chem. Soc. 117, 1201-1209.
45. Cantor, C.R. and Warshaw, M.M. (1970) Biopolymers 9, 1059-1077.
46. Nguyen, C.H., Lhoste, J.M., Lavelle, F., Bissery, M.C. and Bisagni, E. (1990) J. Med. Chem. 33, 1519-1528.
47. Radhakrishnan, I., Patel, D.J. and Gao, X. (1992) Biochemistry 31, 2514-2523.
48. Amosova, O., George, J. and Fresco, J.R. (1997) Nucleic Acids Res. 25, 1930-1934.
49. Chandler, S.P., Strekowski, L., Wilson, D.L. and Fox, K.R. (1995) Biochemistry 34, 7234-7242.
50. Gowers, D.M. and Fox, K.R. (1997) Nucleic Acids Res. 25, 3787-3794.
51. Silver, G.C., Sun, J.S., Nguyen, C.H., Boutorine, A.S., Bisagni, E. and Hélène, C. (1997) J. Am. Chem. Soc. 119, 263-268.
52. Silver, G.C., Nguyen, C.H., Boutorine, A.S., Bisagni, E., Garestier, T. and Hélène, C. (1997) Bioconjugate Chem. 8, 15-22.