Sequencing of the mtDNA cytochrome b gene and reconstruction of the maternal relationships of wood and field mice of the genus apodemus (muridae, rodentia)

Genetika

Volumn 34, Issue 5, 1998, Pages 650-661

  Chelomina, G N ^a   Suzuki, H ^b   Tsuchiya, K ^c   Moriwaki, K ^d   Lyapunova, E A ^e   Vorontsov, N N ^a  

^a RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

^b HOKKAIDO UNIVERSITY   (Japan)

^c UNIVERSITY OF MIYAZAKI   (Japan)

^d GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^e KOL TSOV INSTITUTE OF DEVELOPMENTAL BIOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C; MITOCHONDRIAL DNA; PRIMER DNA;

ANIMAL; ARTICLE; CLASSIFICATION; GENETICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MURIDAE; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

ANIMALS; BASE SEQUENCE; CYTOCHROME C GROUP; DNA PRIMERS; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; MOLECULAR SEQUENCE DATA; MURIDAE; PHYLOGENY; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY;

EID: 0032061687     PISSN: 00166758     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (59)

1. Mammal species of the World // Eds. Wilson D.E., Reeder D.M. 2nd ed. Washington; London: Smithsonian Inst. Press, 1993. 1206p.
2. Filippucci M.G., Simson S., Neva E. Evolutionary biology of the genus Apodemus in Israel: Allozymic and biometric analyses with description of a new species: Apodemus hermanensis (Rodentia, Muridae) // Bull. Zool. 1989. V. 56. P. 361-376.
3. Avise J. C., Lansman R.A. Polymorphism of mitochondrial DNA in populations of higher animals // Evolution of genes and proteins / Eds Nei M., Koehn R.K. Sanderland, Mass.: Sinauer, 1983. P. 147-164.
4. Anderson S., Bankier A.T., Barrell B.C. et al. Sequence and organization of the human mitochondrial genome // Nature (London). 1981. V 280. P. 457-465.
5. Anderson S., de Bruijin M.H.J.,Coulson A.R. et al. Conserved feature of the mammalian mitochondrial genome //J. Mol. Biol. 1982. V. 156. P. 683-717.
6. Barrell B.C., Anderson S., Bankier A.T. et al. Different pattern of codon recognition by mammalian mitochondrial transfer-RNAs //Proc. Natl Acad. Sci. 1980. V. 77. P. 3164-3166.
7. Brown W.M., George M., Wilson Jr., Wilson A.C. Rapid evolution of animal mitochondrial DNA // Proc. Natl Acad. Sci. 1979. V. 76. P. 1967-1971.
8. Cann RL., Stoneking M., Wilson A.C. Mitochondrial DNA and human evolution // Nature. 1987. V. 325. P. 31-36.
9. Brown W.M., Prager EM., WangA.W., Wilson A.C. Mitochondrial DNA sequences of primäres: tempo and mode of evolution //J. Mol. Evol. 1982. V. 18. P. 225-239.
10. Hausewirth W., Lalpis P. Transmission genetics of mammalian mitochondrial: a molecular model and experimental evidence // Archiv, and Perspect. Mitochondrial Res. 1985. V. 2. P. 49-59.
11. Ferris S.D., Sage R.D., Huang C.-M. et al. Flow of mitochondrial DNA across a species boundary // Proc. Natl Acad. Sci. USA. 1983. V. 80. P. 2290-2294.
12. Tegelstrom H. Transfer of mitochondrial DNA from the northern red-backed vole (Cletreonomys rutilus) to the bank vole (C. glaredus) // J. Mol. Evol. 1987. V. 24. P. 218-227.
13. Nei M., Li W.-H. Mathematical model for studying genetic variation in terms of restriction endonucleases // Proc. Natl Acad. Sci. USA. 1979. V. 76. JVs 10. P. 52695273.
14. Kocher T.D., Thomas W.K., MeyerA. etal. Dynamics of mitochondrial DNA evolution in animals: Amplyfication and sequencing with conserved primers // Proc. Natl Acad. Sci. USA. 1989. V. 86. P. 6196-6200.
15. Irwin D.M., Kocher T.D., Wilson A.C. Evolution of the cytochrome b gene of mammals // J. Mol. Evol. 1991. V. 32. P. 128-144.
16. Saitou N., Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees // Mol. Biol. Evol. 1987. V. 4. P. 406-425.
17. Felsenstein J. PHYLIP, version 3.5c. Department of Genetics. Seattle: Univ. of Wash., 1993.
18. Meyer A., Kocher T.D., Basasibwaki P., Wilson A.C. Monophyletic origin of Lake Victoria cichlid fishes sug-gested by mitochondrial DNA sequences // Nature. 1990. V. 347. P. 550-553.
19. Wayne R.K., Jenks S.M. Mitochondrial DNA analysis implying extensive hybridization of the endangered red wolf Canis rufus II Nature. 1991. V. 351. P. 565-568.
20. Hosoda T., Suzuki H., Tsuchiiya K. et al. Phylogenetic relationships among the genus // Martes: Taxonomy, Ecology, Techniques and Management /Eds Proulx G., Bryant H.N., Woodard P.M. Edmonton: The Provincial Museum of Alberta, 1997. P. 3-14.
21. Masuda R., Yoshida M.C. Nucleotide sequence variation of cytochrome b genes in three species of weasels, Mustela itatsi, Mustela sibirica, and Mustela nivalis, detected by improved PCR product-direct sequencing technique //J. Mamm. Soc. Japan. 1994. V. 19. P. 33-43.
22. Masuda R., Yoshida M.C. A molecular phylogeny of the family Mustelidae (Mammalia, Carnivora), based on comparison of mitochondrial cytochrome b nucleotide sequences //Zool. Sci. 1994. V. 11. P. 605-612.
23. Masuda R., Yoshida M.C., Shinyashiki F., Bando G. Molecular phylogenetic status of the Iriomote cat Felis iriomotensis, inferred from mitochondrial DNA sequence analysis //Zool. Sci. 1994. V. 11. P. 597-604.
24. Masuda R., Yoshida M.C. Two Japanese wildcats, the Tsushima cat and Iriomote cat, show the same mitochondrial DNA lineage as the leopard cat Felis hengalensis // Zool. Sci. 1995. V. 12. No. 5. P. 655-659.
25. Hosoda T., Suzuki H., Tsuchiya K., Kryukov A. Phylogenetic relationships among the Mustelidae on rDNA and mtDNA // Population, evolutionary and ecological genetics of animal species. Proc. Intern. Symp. Russia. Vladivostok, 1995. P. 6.
26. Brown G.G., Simpson M.V. Novel feature of animal mt DNA evolution as shown by sequences of two rat cytochrome oxidase subunit II genes // Proc. Natl. Acad. Sci. 1982. V. 79. P. 3246-3250.
27. Ferris S.D., Sage R.D., Prager EM. et aï. Mitochondrial DNA evolution in mice // Genetics. 1983. V. 105. P. 681-721.
28. Aquadro Ch. F., Greenberg B.D. Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals // Genetics. 1983. V. 103. P. 287-312.
29. Chelomina G.N. Rodent satDNA evolution: Hypothesis and facts // Population, evolutionary and ecological ge-netics of animal species. Proc. Intern. Symp. Russia. Vladivostok, 1995. P. 1.
30. Suzuki H., Tsuchiya K., Sakaizumi M. et al. Differentiation of restriction sites in ribosomal DNA in the genus Apodemm II Biochem. Genet. 1990. V. 28. No. 3/4. P. 137-149.
31. Ferns S.D., Ritte U., Lindahl K.F. et al. Unusual type of mitochondrial DNA in mice lacking a maternally transmitted antigen//Nucl. Acid Res. 1983. V. 11. P. 2917-2926.
32. White F.A., Bunn C.L. Segregation of mitochondrial DNA in human somatic cell hybrids // Mol. and Gen. Genet. 1984. V. 197. P. 453-460.
33. Degnan S.M. The perils of single gene trees - mitochondrial versus single copy nuclear DNA variation in whiteeyes (Aves: Zosteropidae) // Molec. Ecol. 1993. V. 2. P. 219-225.
34. Suzuki H., Wakana S., Yonekawa H. et al. Variations in ribosomal DNA and mitochondrial DNA among chromosomal species of subterranean mole rats // Mol. Biol. Evol. 1996. V. 13. No. 1. P. 85-92.
35. Hosoda T., Suzuki H., Yamada T., Tsuchiya K. Restriction site polymorphism in the ribosomal DNA of eight species of Canidae and Mustelidae // Cytologia. 1993. V. 58. P. 223-230.
36. Koh H.S., Yoo B.S. Variation of mitochondria! DNA in two subspecies of striped field mice, Apodemus agrarius chejuensis, from Korea // Korean J. Syst. Zool. 1992. V. 35. P. 332-338.
37. Tegelstrom H., Jaarala M. Genetic divergence in mtDNA between the wood mouse (Apodemus sylvaticus) and yellow necked mouse (A. flavicollis) // Hereditas. 1989. V. 111. P. 49-60.
38. Corbet G.B. The mammals of the palearctic region: A taxonomic review. Ithaka; N.Y.: Cornell. Univ. Press, 1978.
39. Bekasova T.S., Vorontsov N.N., Korobitsyna K.V., Korablev V.P. B- chromosomes and comparative karyology of mice of the genus Apodemus // Genetica. 1980. V. 52. Xs 53. P. 33-43.
40. Pavlenko M.V. Genetic differentiation and taxonomy of wood mice (Rodentia, Muridae, Apodemus) of eastern palearctic // Population, evolutionary and ecological genetics of animal species. Proc. Intern. Symp. Russia. Vladivostok, 1995. P. 16.
41. Moritz C., Dowling T.E., Brown W.M. Evolution of animal mitochondrial DNA: Relevance for population biology and systematics // Ann. Rev. Ecol. Syst. 1987. V. 18. P. 269-292.
42. Avise J.C. Molecular markers, natural history and evolution. London; N.Y.: Champan & Hall, 1994.