Complete genome of a JC virus genotype type 6 from the brain of an African American with progressive multifocal leukoencephalopathy

Journal of Human Virology

Volumn 1, Issue 4, 1998, Pages 267-272

  Agostini, Hansjürgen T ^a,c   Ryschkewitsch, Caroline F ^a   Stoner, Gerald L ^a,b  

^a NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

^c UNIVERSITY OF FREIBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AFRICAN AMERICAN; ARTICLE; BRAIN; FEMALE; GENETICS; GENOTYPE; HUMAN; ISOLATION AND PURIFICATION; LEUKOENCEPHALOPATHY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYOMA VIRUS; SYSTEMIC LUPUS ERYTHEMATOSUS; VIROLOGY; VIRUS GENOME;

ADULT; AFRICAN AMERICANS; BASE SEQUENCE; BRAIN; FEMALE; GENOME, VIRAL; GENOTYPE; HUMANS; LEUKOENCEPHALOPATHY, PROGRESSIVE MULTIFOCAL; LUPUS ERYTHEMATOSUS, SYSTEMIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYOMAVIRUS;

EID: 0032057595     PISSN: 10909508     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (36)

1. Agostini HT, Ryschkewitsch CF, Stoner GL. Genotype profile of human polyomavirus JC excreted in urine of immunocompetent individuals. J Clin Microbiol 1996;34: 159-164.
2. Stoner GL, Agostini HT, Ryschkewitsch CF, Baumhefner RW, Tourtellotte WW. Characterization of JC virus DNA amplified from urine of chronic progressive multiple sclerosis patients. Mult Scler 1996;1:193-199.
3. Kato A, Kitamura T, Sugimoto C, et al. Lack of evidence for the transmission of JC polyomavirus between human populations. Arch Virol 1997;142:875-882.
4. Shah KV, Daniel RW, Strickler HD, Goedert JJ. Investigation of human urine for genomic sequences of the primate polyomaviruses simian virus 40, BK virus, and JC virus. J Infect Dis 1997;176:1618-1621.
5. Walker DL. Progressive multifocal leukoencephalopathy. In Vinken PJ, Bruyn GW, Klawans HL, Koetsier JC, eds. Handbook of clinical neurology, vol 47. Amsterdam: Elsevier, 1985:503-524.
6. Major EO, Amemiya K, Tornatore CS, Houff SA, Berger JR. Pathogenesis and molecular biology of progressive multifocal leukoencephalopathy, the JC virus-induced demyelinating disease of the human brain. Clin Microbiol Rev 1992;5:49-73.
7. Berger JR, Concha M. Progressive multifocal leukoencephalopathy: the evolution of a disease once considered rare. J Neurovirol 1995;1:5-18.
8. Major EO, Ault GS. Progressive multifocal leukoencephalopathy: clinical and laboratory observations on a viral induced demyelinating disease in the immunodeficient patient. Curr Opin Neurol 1995;8:184-190.
9. Singer EJ, Stoner GL, Singer P, et al. AIDS presenting as progressive multifocal leukoencephalopathy with clinical response to zidovudine. Acta Neurol Scand 1994;90:443-447.
10. Chimelli L, Rosemberg S, Hahn MD, Lopes MBS, Barretto Netto M. Pathology of the central nervous system in patients infected with the human immunodeficiency virus (HIV): a report of 252 autopsy cases from Brazil. Neuropathol Appl Neurobiol 1992;18:478-488.
11. Kuchelmeister K, Gullotta F, Bergman M, Angeli G, Masini T. Progressive multifocal leukoencephalopathy (PML) in the acquired immunodeficiency syndrome (AIDS): a neuropathological study of 21 cases. Path Res Pract 1993;189:163-173.
12. Lang W, Miklossy J, Deruaz JP, et al. Neuropathology of the acquired immune deficiency syndrome (AIDS): a report of 135 consecutive autopsy cases from Switzerland. Acta Neuropathol (Berl) 1989;77:379-390.
13. Agostini HT, Ryschkewitsch CF, Mory R, Singer FJ, Stoner GL. JC virus (JCV) genotypes in brain tissue from patients with progressive multifocal leukoencephalopathy (PML) and in urine from controls without PML: increased frequency of JCV type 2 in PML. J Infect Dis 1997;176:1-8.
14. Agostini HT, Ryschkewitsch CF, Singer EJ, Baumhefner RW, Stoner GL. JC virus type 2B is found more frequently in brain tissue of progressive multifocal leukoencephalopathy (PML) patients than in control urines. J Hum Virol 1998;1:200-206.
15. Rübsamen-Waigman H, Adamski M, von Briesen H, et al. Lethal progressive multifocal leukoencephalopathy in an HIV-2 infected person as the only AIDS manifestation. AIDS-Forschung (AIFO) 1987;2:572-575.
16. Stoner GL, Agostini HT, Ryschkewitsch CF, et al. Two cases of progressive multifocal leukoencephalopathy (PML) due to JC virus: detection of JCV type 3 in a Gambian AIDS patient. J Med Microbiol 1998;47:1-10.
17. Frisque RJ, Bream GL, Cannella MT. Human polyomavirus JC virus genome. J Virol 1984;51:458-469.
18. Loeber G, Dörries K. DNA rearrangements in organ-specific variants of polyomavirus JC strain GS. J Virol 1988;62:1730-1735.
19. Agostini HT, Shishido-Hara Y, Baumhefner RW, Ryschkewitsch CF, Stoner GL. JC virus type 2: definition of subtypes based on DNA sequence analysis of ten complete genomes. J Gen Virol 1997;79:1143-1151.
20. Gallia GL, Houff SA, Major EO, Khalili K. JC virus infection of lymphocytes - revisited. J Infect Dis 1997;176: 1603-1609.
21. Agostini HT, Ryschkewitsch CF, Singer EJ, Stoner GL. JC virus type 1 has multiple subtypes: three new complete genomes. J Gen Virol 1998;79:801-805.
22. Stoner GL, Agostini HT, Ryschkewitsch CF, Komoly S. JC virus excreted by multiple sclerosis patients and paired controls from Hungary. Mult Scler 1998;4:45-48.
23. Yogo Y, Iida T, Taguchi F, Kitamura T, Aso Y. Typing of human polyomavirus JC virus on the basis of restriction fragment length polymorphisms. J Clin Microbiol 1991; 29:2130-2138.
24. Agostini HT, Yanagihara R, Davis V, Ryschkewitsch CF, Stoner GL. Asian genotypes of JC virus in Native Americans and in a Pacific Island population: markers of viral evolution and human migration. Proc Natl Acad Sci USA 1997;94:14542-14546.
25. Agostini HT, Brubaker GR, Shao J, et al. BK virus and a new type of JC virus excreted by HIV-1 positive patients in rural Tanzania. Arch Virol 1995;140:1919-1934.
26. Agostini HT, Ryschkewitsch CF, Brubaker GR, Shao J, Stoner GL. Five complete genomes of JC virus type 3 from Africans and African Americans. Arch Virol 1997; 142:637-655.
27. Ault GS, Stoner GL. Two major types of JC virus defined in progressive multifocal leukoencephalopathy brain by early and late coding region DNA sequences. J Gen Virol 1992;73:2669-2678.
28. Agostini HT, Stoner GL. Amplification of the complete polyomavirus JC genome from brain, cerebrospinal fluid and urine using pre-PCR restriction enzyme digestion. J Neurovirol 1995;1:316-320.
29. Yogo Y, Kitamura T, Sugimoto C, et al. Isolation of a possible archetypal JC virus DNA sequence from nonimmunocompromised individuals. J Virol 1990;64:3139-3143.
30. Ault GS, Stoner GL. Human polyomavirus JC promoter/ enhancer rearrangement patterns from progressive multifocal leukoencephalopathy brain are unique derivatives of a single archetypal structure. J Gen Virol 1993;74:1499-1507.
31. Agostini HT, Ryschkewitsch CF, Singer EJ, Stoner GL. JC virus regulatory region rearrangements and genotypes in progressive multifocal leukoencephalopathy: two independent aspects of virus variation. J Gen Virol 1997;78: 659-664.
32. Sugimoto C, Kitamura T, Guo J, et al. Typing of urinary JC virus DNA offers a novel means of tracing human migrations. Proc Natl Acad Sci U S A 1997;94:9191-9196.
33. Lucas SB, Hounnou A, Peacock C, et al. The mortality and pathology of HIV infection in a West African city. AIDS 1993;7:1569-1579.
34. GuoJ, Kitamura T, Ebihara H, et al. Geographical distribution of the human polyomavirus JC virus type A and B and isolation of a new type from Ghana. J Gen Virol 1996;77:919-927.
35. Agostini HT, Ryschkewitsch CF, Singer EJ, Stoner GL. Co-infection with two JC virus genotypes in brain, cerebrospinal fluid or urinary tract detected by direct cycle sequencing of PCR products. J Neurovirol 1996;2:259-267.
36. Iida T, Kitamura T, Guo J, et al. Origin of JC polyomavirus variants associated with progressive multifocal leukoencephalopathy. Proc Natl Acad Sci U S A 1993;90:5062-5065.