Regulatory conservation and divergence of σ32 homologs from gram- negative bacteria: Serratia marcescens, Proteus mirabilis, Pseudomonas aeruginosa, and Agrobacterium tumefaciens

Journal of Bacteriology

Volumn 180, Issue 9, 1998, Pages 2402-2408

  Nakahigashi, Kenji ^a   Yanagi, Hideki ^a   Yura, Takashi ^a  

^a Kyoto Research Park   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

HEAT SHOCK PROTEIN;

ARTICLE; BACTERIAL GENE; GENETIC CONSERVATION; GENETIC VARIABILITY; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEUS MIRABILIS; PSEUDOMONAS AERUGINOSA; RHIZOBIUM RADIOBACTER; SEQUENCE HOMOLOGY; SERRATIA MARCESCENS; TRANSCRIPTION REGULATION;

AGROBACTERIUM TUMEFACIENS; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; GAMMAPROTEOBACTERIA; MIRABILIS; NEGIBACTERIA; PROKARYOTA; PROTEOBACTERIA; PROTEUS MIRABILIS; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA; SERRATIA MARCESCENS;

EID: 0031968254     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.180.9.2402-2408.1998     Document Type: Article

References (39)

1. Benvenisti, L., S. Koby, A. Rutman, H. Giladi, T. Yura, and A. B. Oppenheim. 1995. Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa. Gene 155:73-76.
2. Bukau, B. 1993. Regulation of the Escherichia coli heat shock response. Mol. Microbiol. 9:671-680.
3. Cowing, D. W., J. C. A. Bardwell, E. A. Craig, C. Woolford, R. W. Hendrix, and C. A. Gross. 1985. Consensus sequence for Escherichia coli heat shock gene promoters. Proc. Natl. Acad. Sci. USA 82:2679-2683.
4. Craig, E. A., and C. A. Gross. 1991. Is hsp70 the cellular thermometer? Trends Biochem. Sci. 16:135-140.
5. Fleischmann, R. D., M. D. Adams, O. White, R. A. Clayton, E. F. Kirkness, A. R. Kerlavage, C. J. Bult, J.-F. Tomb, B. A. Dougherty, J. M. Merrick, K. McKenney, G. Sutton, W. FitzHugh, C. Fields, J. D. Gocayne, J. Scott, R. Shirley, L.-I. Liu, A. Glodek, J. M. Kelley, J. F. Weidman, C. A. Phillips, T. Spriggs, E. Hedblom, M. D. Cotton, T. R. Utterback, M. C. Hanna, D. T. Nguyen, D. M. Saudek, R. C. Brandon, L. D. Fine, J. L. Fritchman, J. L. Fuhrmann, N. S. M. Georghagen, C. L. Gnehm, L. A. McDonald, K. V. Small, C. M. Fraser, H. O. Smith, and J. C. Venter. 1995. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269:496-512.
6. Garvin, D. L., and S. C. Hardies. 1989. Nucleotide sequence for the htpR gene from Citrobacter freundii. Nucleic Acids Res. 17:4889.
7. Georgopoulos, C., K. Liberek, M. Zylicz, and D. Ang. 1994. Properties of the heat shock proteins of Escherichia coli and the autoregulation of the heat shock response, p. 209-249. In R. I. Morimoto, A. Tissieres, and C. Georgopoulos (ed.), The biology of heat shock proteins and molecular chaperones. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
8. Gross, C. A. 1996. Function and regulation of the heat shock proteins, p. 1382-1399. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. AMS Press, Washington, D.C.
9. Gross, C. A., M. Lonetto, and R. Losick. 1992. Bacterial sigma factors, p. 129-176. In S. L. McKnight and K. R. Yamamoto (ed.), Transcriptional regulation. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
10. Grossman, A. D., J. W. Erickson, and C. Gross. 1984. The htpR gene product of E. coli is a sigma factor for heat-shock promoters. Cell 38:383-390.
11. 32, the heat shock regulator in Escherichia coli, is governed by HflB. Proc. Natl. Acad. Sci. USA 92:3516-3520.
12. 32 synthesis: requirement for an internal control element. J. Bacteriol. 173: 3904-3906.
13. 32 and abnormal proteins in Escherichia coli. J. Bacteriol. 179:7219-7225.
14. 32, constitutes a DnaK binding site and is conserved among eubacteria. J. Mol. Biol. 256:829-837.
15. 32-dependent class of heat shock genes in Bradyrhizobium japonicum. Mol. Gen. Genet. 254:195-206.
16. Naczynski, Z. M., C. Mueller, and A. M. Kropinski. 1995. Cloning the gene for the heat shock response positive regulator (sigma 32 homolog) from Pseudomonas aeruginosa. Can. J. Microbiol. 41:75-87.
17. 32 synthesis during the heat shock response of Escherichia coli. Proc. Natl. Acad. Sci. USA 88:10515-10519.
18. 32 polypeptide is involved in DnaK-mediated negative control of the heat shock response in Escherichia coli. Proc. Natl. Acad. Sci. USA 91: 10280-10284.
19. 32 homologs from gram negative bacteria: conserved mRNA and protein segments for heat shock regulation. Nucleic Acids Res. 23:4383-4390.
20. Nakahigashi, K. Unpublished data.
21. 1 and three small heat shock genes. J. Bacteriol. 178:5337-5346.
22. 32 homolog in Caulobacter crescentus. J. Bacteriol. 178:1919-1927.
23. 32 homolog of Vibrio cholerae. Gene 189:203-207.
24. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
25. Sato, S. and H. Ishikawa. 1997. Expression and control of an operon from an intracellular symbiont which is homologous to the groE operon. J. Bacteriol. 179:2300-2304.
26. Segal, G. and E. Z. Ron. 1995. The dnaKJ operon of Agrobacterium tumefaciens: transcriptional analysis and evidence for a new heat shock promoter. J. Bacteriol. 177:5952-5958.
27. Sprengart, M. L., H. P. Fatscher, and E. Fuchs. 1990. The initiation of translation in E. coli: apparent base pairing between the 16S rRNA and downstream sequences of the mRNA. Nucleic Acids Res. 18:1719-1723.
28. 32. Genes Dev. 4:2202-2209.
29. 32. Nature 329: 348-351.
30. Tilly, K., N. McKittrick, M. Zylicz, and C. Georgopoulos. 1983. The dnaK protein modulates the heat-shock response of Escherichia coli. Cell 34:641-646.
31. 32. J. Bacteriol. 171:1585-1589.
32. Tobe, T., K. Ito, and T. Yura. 1984. Isolation and physical mapping of temperature-sensitive mutants defective in heat-shock induction of proteins in Escherichia coli. Mol. Gen. Genet. 195:10-16.
33. 32. EMBO J. 14:2551-2560.
34. 32 from Caulobacter crescentus. J. Bacteriol. 178:2094-2101.
35. 32 and suppresses temperature-sensitive growth of the rpoH15 mutant of Escherichia coli. J. Bacteriol. 172:2124-2130.
36. 32. Genes Cells 1:277-284.
37. Yura, T., H. Nagai, and H. Mori. 1993. Regulation of heat shock response in bacteria. Annu. Rev. Microbiol. 47:321-350.
38. 32 synthesis mediated by mRNA secondary structure: a primary step of the heat shock response in Escherichia coli. Nucleic Acids Res. 21:5449-5455.
39. 32. J. Bacteriol. 170:3640-3649.