The rpoH gene encoding σ32 homolog of Vibrio cholerae

Gene

Volumn 189, Issue 2, 1997, Pages 203-207

  Sahu, Gautam Kumar ^a   Chowdhury, Rukhsana ^a   Das, Jyotirmoy ^a  

^a INDIAN INSTITUTE OF CHEMICAL BIOLOGY   (India)

Author keywords

Bidirectional transcription terminator; Heat shock response; mRNA secondary structure; RpoH box; Sigma factor; udhA gene

Indexed keywords

MESSENGER RNA; OXIDOREDUCTASE; RIBOSOME RNA; SIGMA FACTOR;

ARTICLE; BACTERIAL GENE; GENETIC CONSERVATION; HEAT SHOCK RESPONSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; SEQUENCE HOMOLOGY; VIBRIO CHOLERAE;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; CLONING, MOLECULAR; GENES, BACTERIAL; HEAT-SHOCK PROTEINS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; RNA, MESSENGER; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SIGMA FACTOR; TRANSCRIPTION FACTORS; VIBRIO CHOLERAE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; VIBRIO CHOLERAE;

EID: 0030956691     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(96)00849-9     Document Type: Article

References (19)

1. Blattner, F.R., Burland, V.D., Plunkett III, G., Sofia, H.J. and Daniels, D.L. (1993) Analysis of the Escherichia coli genome.IV DNA sequence of the region from 89.2 to 92.8 minutes. Nucleic Acids Res. 21, 5408-5417.
2. Bukau, B. (1993) Regulation of the Escherichia coli heat shock response. Mol. Microbiol 9, 671-680.
3. Cooper, S. and Ruettinger, T. (1975) A temperature sensitive nonsense mutation affecting the synthesis of a major protein of Escherichia coli K12. Mol. Gen. Genet. 139, 167-176.
4. Garvin, L.D. and Hardies, G.C. (1989) Nucleotide sequence of the htpR gene from Citrobacter freundii. Nucleic Acids Res. 17, 4889.
5. Gilbert, D.G. (1990) Internet ftp://iubio.bio.indiana.edu
6. Jaeger, J.A., Turner, D.H. and Zuker, M. (1990) Predicting optimal and suboptimal secondary structure for RNA. Methods Enzymol. 183, 281-306.
7. Kita-Tsukamoto, K., Oyaizu, H., Nanba, K. and Shimizu, U. (1993) Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis 16S rRNA sequences. Int. J. Syst. J. Bacteriol. 43, 8-19.
8. Landick, R., Vaughn, V., Lau, E.T., Van Bogelen, R.A., Erickson, J.W. and Neidhardt, F.C. (1984) Nucleotide sequence of the heat shock regulatory gene of E. coli suggests its protein product may be a transcription factor. Cell 38, 175-182.
9. 70 family: sequence conservation and evolutionary relationships. J. Bacteriol. 174, 3843-3849.
10. Miller, V.L. and Mekalanos, J.J. (1988) A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR. J. Bacteriol. 170, 2575-2583.
11. 32 polypeptide is involved in DnaK-mediated negative control of the heat shock response in Escherichia coli. Proc. Natl. Acad. Sci. USA 91, 10280-10284.
12. 32 homologs from gram negative bacteria: conserved mRNA and protein segment for heat shock regulation. Nucleic Acids Res. 21, 4383-4390.
13. Parsot, C. and Mekalanos, J.J. (1991) Expression of ToxR, the transcriptional activator of the virulence factors in Vibrio cholerae is modulated by the heat shock response. Proc. Natl. Acad. Sci. USA 87, 9898-9902.
14. Postle, K. and Good, R.F. (1985) A bidirectional Rho-independent transcription terminator between the E. coli tonB gene and an opposing gene. Cell 41, 577-585.
15. Sahu, G.K., Chowdhury, R. and Das, J. (1994) Heat shock response and heat shock protein antigens of Vibrio cholerae. Infect. Immun. 62, 5624-5631.
16. Yura, T., Nagai, H.and Mori, H. (1993) Regulation of the heat shock response in bacteria. Annu. Rev. Microbiol. 47, 321-350.
17. Yura, T., Tobe, T., Ito, K. and Osawa, T. (1984) Heat shock regulatory gene (htpR) of Escherichia coli is required for growth at high temperature but is dispensible at low temperature Proc. Natl. Acad. Sci. USA 81, 6803-6807.
18. 32 synthesis mediated by mRNA secondary structure; a primary step of the heat shock response in Escherichia coli. Nucleic Acids Res. 23, 5449-5455.
19. 32. J. Bacteriol. 170, 3640-3649.