메뉴 건너뛰기




Volumn 144, Issue 2, 1998, Pages 467-477

Identification of the contiguous Paracoccus denitrificans ccmF and ccmH genes: Disruption of ccmF, encoding a putative transporter, results in formation of an unstable apocytochrome c and deficiency in siderophore production

Author keywords

Apocytochrome; c type cytochrome biogenesis; ccmF; Paracoccus denitrificans; Periplasmic proteolysis

Indexed keywords

4 AMINOBUTYRIC ACID; CARRIER PROTEIN; CYTOCHROME C; GENE PRODUCT; HEME; LYASE; MEMBRANE PROTEIN; SIDEROPHORE;

EID: 0031937605     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-144-2-467     Document Type: Article
Times cited : (25)

References (43)
  • 3
  • 4
    • 0028811652 scopus 로고
    • Enzymes and associated electron transport systems that catalyse the respiratory reduction of nitrogen oxides and oxyanions
    • Berks, B. C., Ferguson, S. J., Moir, J. W. B. & Richardson, D. J. (1995). Enzymes and associated electron transport systems that catalyse the respiratory reduction of nitrogen oxides and oxyanions. Biochim Biophys Acta 1232, 97-173.
    • (1995) Biochim Biophys Acta , vol.1232 , pp. 97-173
    • Berks, B.C.1    Ferguson, S.J.2    Moir, J.W.B.3    Richardson, D.J.4
  • 5
    • 0025219623 scopus 로고
    • Isolation of a Rhodobacter capsulatus mutant that lacks c-type cytochromes and excretes porphyrins
    • Biel, S.W. & Biel, A. J. (1990). Isolation of a Rhodobacter capsulatus mutant that lacks c-type cytochromes and excretes porphyrins. J Bacteriol 172, 1321-1326.
    • (1990) J Bacteriol , vol.172 , pp. 1321-1326
    • Biel, S.W.1    Biel, A.J.2
  • 6
    • 0016753870 scopus 로고
    • The reversibility of active sulphate transport in membrane vesicles of Paracoccus denitrificans
    • Burnell, J. N., John, P. & Whatley, F. R. (1975). The reversibility of active sulphate transport in membrane vesicles of Paracoccus denitrificans. Biochem J 150, 527-536.
    • (1975) Biochem J , vol.150 , pp. 527-536
    • Burnell, J.N.1    John, P.2    Whatley, F.R.3
  • 7
    • 0028951033 scopus 로고
    • The Cpx two-component signal transduction pathway of Escherichia coli regulates transcription of the gene specifying the stress-inducible periplasmic protease, DegP
    • Danese, P. N., Snyder, W. B., Cosma, C. L., Davis, L. J. & Silhavy, T. J. (1995). The Cpx two-component signal transduction pathway of Escherichia coli regulates transcription of the gene specifying the stress-inducible periplasmic protease, DegP. Genes Dev 9, 387-398.
    • (1995) Genes Dev , vol.9 , pp. 387-398
    • Danese, P.N.1    Snyder, W.B.2    Cosma, C.L.3    Davis, L.J.4    Silhavy, T.J.5
  • 8
    • 0029088169 scopus 로고
    • Characterisation of the cycHJKL genes involved in cytochrome c biogenesis and symbiotic nitrogen fixation in Rhizobium leguminosarum
    • Delgado, M. J., Yeoman, K. H., Wu, G., Vargas, C., Davies, A. E., Poole, R. K., Johnston, A. W. B. & Downie, J. A. (1995). Characterisation of the cycHJKL genes involved in cytochrome c biogenesis and symbiotic nitrogen fixation in Rhizobium leguminosarum. J Bacteriol 177, 4927-4934.
    • (1995) J Bacteriol , vol.177 , pp. 4927-4934
    • Delgado, M.J.1    Yeoman, K.H.2    Wu, G.3    Vargas, C.4    Davies, A.E.5    Poole, R.K.6    Johnston, A.W.B.7    Downie, J.A.8
  • 9
    • 0021760092 scopus 로고
    • A comprehensive set of sequence analysis programs for the VAX
    • Devereux, J., Haeberli, P. & Smithies, O. (1984). A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12, 387-395.
    • (1984) Nucleic Acids Res , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 10
    • 0029653518 scopus 로고
    • Whole-genome sequencing and assembly of Haemophilus influenzae Rd
    • Fleischmann, R. D., Adams, M. D., White, O. & 37 other authors (1995). Whole-genome sequencing and assembly of Haemophilus influenzae Rd. Science 269, 496-512.
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1    Adams, M.D.2    White, O.3
  • 11
    • 0029769308 scopus 로고    scopus 로고
    • A cytochrome c biogenesis gene involved in pyoverdine production in Pseudomonas fluorescens ATCC 17400
    • Gaballa, A., Koedam, N. & Cornelis, P. (1996). A cytochrome c biogenesis gene involved in pyoverdine production in Pseudomonas fluorescens ATCC 17400. Mol Microbiol 21, 777-785.
    • (1996) Mol Microbiol , vol.21 , pp. 777-785
    • Gaballa, A.1    Koedam, N.2    Cornelis, P.3
  • 12
    • 0030954829 scopus 로고    scopus 로고
    • Differential levels of specific cytochrome c biogenesis proteins in response to oxygen: Analysis of the ccl operon in Rhodobacter capsulatus
    • Gabbert, K. K., Goldman, B. S. & Kranz, R. G. (1997). Differential levels of specific cytochrome c biogenesis proteins in response to oxygen: analysis of the ccl operon in Rhodobacter capsulatus. J Bacteriol 179, 5422-5428.
    • (1997) J Bacteriol , vol.179 , pp. 5422-5428
    • Gabbert, K.K.1    Goldman, B.S.2    Kranz, R.G.3
  • 13
    • 0029858253 scopus 로고    scopus 로고
    • Use of heme reporters for studies of cytochrome biosynthesis and heme transport
    • Goldman, B. S., Gabbert, K. K. & Kranz, R. G. (1996). Use of heme reporters for studies of cytochrome biosynthesis and heme transport. J Bacteriol 178, 6338-6347.
    • (1996) J Bacteriol , vol.178 , pp. 6338-6347
    • Goldman, B.S.1    Gabbert, K.K.2    Kranz, R.G.3
  • 14
    • 0029843893 scopus 로고    scopus 로고
    • The role of the genes nrfEFG and ccmFH in cytochrome c biosynthesis in Escherichia coli
    • Grove, J., Busby, S. & Cole, J. A. (1996). The role of the genes nrfEFG and ccmFH in cytochrome c biosynthesis in Escherichia coli. Mol Gen Genet 252, 332-341.
    • (1996) Mol Gen Genet , vol.252 , pp. 332-341
    • Grove, J.1    Busby, S.2    Cole, J.A.3
  • 15
    • 0026716643 scopus 로고
    • Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule
    • von Heijne, G. (1992). Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule. J Mol Biol 225, 487-494.
    • (1992) J Mol Biol , vol.225 , pp. 487-494
    • Von Heijne, G.1
  • 16
    • 0028211273 scopus 로고
    • A model recognition approach to the prediction of all-helical membrane structure and topology
    • Jones, D. T., Taylor, W. R. & Thornton, J. M. (1994). A model recognition approach to the prediction of all-helical membrane structure and topology. Biochemistry 33, 3038-3049.
    • (1994) Biochemistry , vol.33 , pp. 3038-3049
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 17
    • 0028968401 scopus 로고
    • The cycHJKL genes of Rhizobium meliloti involved in cytochrome c biogenesis are required for "respiratory" nitrate reduction ex planta and for nitrogen fixation during symbiosis
    • Kereszt, A., Slaska-Kiss, K., Putnoky, P., Banfali, Z. & Kondorosi, A. (1995). The cycHJKL genes of Rhizobium meliloti involved in cytochrome c biogenesis are required for "respiratory" nitrate reduction ex planta and for nitrogen fixation during symbiosis. Mol Gen Genet 247, 39-47.
    • (1995) Mol Gen Genet , vol.247 , pp. 39-47
    • Kereszt, A.1    Slaska-Kiss, K.2    Putnoky, P.3    Banfali, Z.4    Kondorosi, A.5
  • 18
    • 0031458333 scopus 로고    scopus 로고
    • The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
    • Klenk, H.-P., Clayton, R. A., Tomb, J.-F. & 48 other authors (1997). The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature, 390, 364-370.
    • (1997) Nature , vol.390 , pp. 364-370
    • Klenk, H.-P.1    Clayton, R.A.2    Tomb, J.-F.3
  • 20
    • 0025317783 scopus 로고
    • The HtrA (DegP) protein, essential for Escherichia coli survival at high temperatures, is an endopeptidase
    • Lipinska, B., Zylicz, M. & Georgopoulos, C. (1990). The HtrA (DegP) protein, essential for Escherichia coli survival at high temperatures, is an endopeptidase. J Bacteriol 172, 1791-1797.
    • (1990) J Bacteriol , vol.172 , pp. 1791-1797
    • Lipinska, B.1    Zylicz, M.2    Georgopoulos, C.3
  • 21
    • 0027429443 scopus 로고
    • Molecular organisation of the Escherichia coli gab cluster: Nucleotide sequences of the structural genes gabD and gabP and expresssion of the GABA permease gene
    • Niegemann, E., Schultz, A. & Bartsch, K. (1993). Molecular organisation of the Escherichia coli gab cluster: nucleotide sequences of the structural genes gabD and gabP and expresssion of the GABA permease gene. Arch Microbiol 160, 454-460.
    • (1993) Arch Microbiol , vol.160 , pp. 454-460
    • Niegemann, E.1    Schultz, A.2    Bartsch, K.3
  • 22
    • 0024372494 scopus 로고
    • 1 (nitrite reductase) from Paracoccus denitrificans
    • 1 (nitrite reductase) from Paracoccus denitrificans. Mol Microbiol 3, 653-661.
    • (1989) Mol Microbiol , vol.3 , pp. 653-661
    • Page, M.D.1    Ferguson, S.J.2
  • 23
    • 0025140710 scopus 로고
    • 1 are translocated to the periplasm of Paracoccus denitrificans in the absence of haem incorporation caused by either mutation or inhibition of haem synthesis
    • 1 are translocated to the periplasm of Paracoccus denitrificans in the absence of haem incorporation caused by either mutation or inhibition of haem synthesis. Mol Microbiol 4, 1181-1192.
    • (1990) Mol Microbiol , vol.4 , pp. 1181-1192
    • Page, M.D.1    Ferguson, S.J.2
  • 25
    • 0030749493 scopus 로고    scopus 로고
    • 3-type cytochrome biogenesis; evidence for a reductase role in vivo
    • 3-type cytochrome biogenesis; evidence for a reductase role in vivo. Mol Microbiol 24, 977-990.
    • (1997) Mol Microbiol , vol.24 , pp. 977-990
    • Page, M.D.1    Ferguson, S.J.2
  • 26
    • 0031050448 scopus 로고    scopus 로고
    • The Paracoccus denitrificans ccmA, B and C genes: Cloning and sequencing, and analysis of the potential of their products to form a haem or apo- C-type cytochrome transporter
    • Page, M. D., Pearce, D. A., Norris, H. A. C. & Ferguson, S. J. (1997a). The Paracoccus denitrificans ccmA, B and C genes: cloning and sequencing, and analysis of the potential of their products to form a haem or apo-c-type cytochrome transporter. Microbiology 143, 563-576.
    • (1997) Microbiology , vol.143 , pp. 563-576
    • Page, M.D.1    Pearce, D.A.2    Norris, H.A.C.3    Ferguson, S.J.4
  • 27
    • 0030729757 scopus 로고    scopus 로고
    • Unexpected implications from the H. pylori genome for understanding periplasmic c-type cytochrome assembly in Gram-negative bacteria in co-existence with disulphide bond formation
    • Page, M. D., Tomlinson, E. & Ferguson, S. J. (1997b). Unexpected implications from the H. pylori genome for understanding periplasmic c-type cytochrome assembly in Gram-negative bacteria in co-existence with disulphide bond formation. Mol. Microbiol 26, 413-415.
    • (1997) Mol. Microbiol , vol.26 , pp. 413-415
    • Page, M.D.1    Tomlinson, E.2    Ferguson, S.J.3
  • 28
    • 0029024872 scopus 로고
    • Diminished degradation of yeast cytochrome c by interactions with its physiological partners
    • Pearce, D. A. & Sherman, F. (1995). Diminished degradation of yeast cytochrome c by interactions with its physiological partners. Proc Natl Acad Sci USA 92, 3735-3739.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 3735-3739
    • Pearce, D.A.1    Sherman, F.2
  • 29
    • 0028279520 scopus 로고
    • Predictions of transmembrane segments in proteins utilising multiple sequence alignments
    • Persson, B. & Argos, P. (1994). Predictions of transmembrane segments in proteins utilising multiple sequence alignments. J Mol Biol 237, 182-192.
    • (1994) J Mol Biol , vol.237 , pp. 182-192
    • Persson, B.1    Argos, P.2
  • 30
    • 0025823215 scopus 로고
    • Discovery and sequence analysis of bacterial genes involved in the biogenesis of c-type cytochromes
    • Ramseier, T., Winteler, H. V. & Hennecke, H. (1991). Discovery and sequence analysis of bacterial genes involved in the biogenesis of c-type cytochromes. J Biol Chem 266, 7793-7803.
    • (1991) J Biol Chem , vol.266 , pp. 7793-7803
    • Ramseier, T.1    Winteler, H.V.2    Hennecke, H.3
  • 31
    • 0028964914 scopus 로고
    • The cycHJKL gene cluster plays an essential role in the biogenesis of c-type cytochromes in Bradyrhizobium japonicum
    • Ritz, D., Thöny-Meyer, L. & Hennecke, H. (1995). The cycHJKL gene cluster plays an essential role in the biogenesis of c-type cytochromes in Bradyrhizobium japonicum. Mol Gen Genet 247, 27-38.
    • (1995) Mol Gen Genet , vol.247 , pp. 27-38
    • Ritz, D.1    Thöny-Meyer, L.2    Hennecke, H.3
  • 32
    • 0028295739 scopus 로고
    • 550 requires targeting to the periplasm whereas that of holo Hydrogenobacter thermophilus does not. Implications for c-type cytochrome biogenesis
    • 550 requires targeting to the periplasm whereas that of holo Hydrogenobacter thermophilus does not. Implications for c-type cytochrome biogenesis. FEBS Lett 340, 65-70.
    • (1994) FEBS Lett , vol.340 , pp. 65-70
    • Sambongi, Y.1    Ferguson, S.J.2
  • 34
    • 0023127806 scopus 로고
    • Universal chemical assay for the detection and determination of siderophores
    • Schwyn, B. & Neilands, J. B. (1987). Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160, 47-56.
    • (1987) Anal Biochem , vol.160 , pp. 47-56
    • Schwyn, B.1    Neilands, J.B.2
  • 35
    • 0021027842 scopus 로고
    • A broad host range mobilization system for in vivo genetic engineering: Transposon mutagenesis in Gram-negative bacteria
    • Simon, R., Priefer, U. & Pühler, A. (1983). A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Bio/Technology 1, 37-45.
    • (1983) Bio/Technology , vol.1 , pp. 37-45
    • Simon, R.1    Priefer, U.2    Pühler, A.3
  • 36
    • 0016439452 scopus 로고
    • The identification and biosynthesis of siderochromes formed by Micrococcus denitrificans
    • Tait G. H. (1975). The identification and biosynthesis of siderochromes formed by Micrococcus denitrificans. Biochem J 146, 191-204.
    • (1975) Biochem J , vol.146 , pp. 191-204
    • Tait, G.H.1
  • 37
    • 0028290646 scopus 로고
    • Cytochrome c biogenesis in bacteria: A possible pathway begins to emerge
    • Thöny-Meyer, L., Ritz, D. & Hennecke, H. (1994). Cytochrome c biogenesis in bacteria: a possible pathway begins to emerge. Mol Microbiol 12, 1-9.
    • (1994) Mol Microbiol , vol.12 , pp. 1-9
    • Thöny-Meyer, L.1    Ritz, D.2    Hennecke, H.3
  • 39
    • 17044454865 scopus 로고    scopus 로고
    • Escherichia coli ccm in-frame deletion mutants can produce periplasmic cytochrome b but not cytochrome c
    • Throne-Holst, M., Thöny-Meyer, L. & Hederstedt, L. (1997). Escherichia coli ccm in-frame deletion mutants can produce periplasmic cytochrome b but not cytochrome c. FEBS Lett 410, 351-355.
    • (1997) FEBS Lett , vol.410 , pp. 351-355
    • Throne-Holst, M.1    Thöny-Meyer, L.2    Hederstedt, L.3
  • 40
    • 0001888973 scopus 로고
    • Isolation and characterisation of Paracoccus denitrificans mutants with increased conjugation frequencies and pleiotropic loss of a (nGATCn) DNA-modifying property
    • de Vries, G. E., Harms, N., Hoogedijk, J. J. & Stouthamer, A. H. (1989). Isolation and characterisation of Paracoccus denitrificans mutants with increased conjugation frequencies and pleiotropic loss of a (nGATCn) DNA-modifying property. Arch Microbiol 152, 52-57.
    • (1989) Arch Microbiol , vol.152 , pp. 52-57
    • De Vries, G.E.1    Harms, N.2    Hoogedijk, J.J.3    Stouthamer, A.H.4
  • 41
    • 0029867910 scopus 로고    scopus 로고
    • The plastid-encoded ccs a gene is required for heme attachment to chloroplast c-type cytochromes
    • Xie, Z. & Merchant, S. (1996). The plastid-encoded ccs A gene is required for heme attachment to chloroplast c-type cytochromes. J Biol Chem 271, 4632-4639.
    • (1996) J Biol Chem , vol.271 , pp. 4632-4639
    • Xie, Z.1    Merchant, S.2
  • 42
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-Perron, C., Vieira, J. & Messing, J. (1985). Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 43
    • 0031034273 scopus 로고    scopus 로고
    • High affinity iron aquisition in Rhizobium leguminosarum requires the cycHJKL operon and the feuPQ gene products, which belong to the family of two-component transcriptional regulators
    • Yeoman, K. H., Delgado, M.-J., Wexler, M., Downie, J. A. & Johnston, A. W. B. (1997). High affinity iron aquisition in Rhizobium leguminosarum requires the cycHJKL operon and the feuPQ gene products, which belong to the family of two-component transcriptional regulators. Microbiology 143, 127-134.
    • (1997) Microbiology , vol.143 , pp. 127-134
    • Yeoman, K.H.1    Delgado, M.-J.2    Wexler, M.3    Downie, J.A.4    Johnston, A.W.B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.