Genotyping of grapevine and rootstock cultivars using microsatellite markers

Vitis

Volumn 37, Issue 1, 1998, Pages 15-20

  Sefc, Kristina M ^a   Regner, F ^b   Glossl J ^a   Steinkellner, Herta ^a  

^a UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

^b Hohere Bundeslehranstalt B   (Austria)

Author keywords

Genotyping; Identification; Microsatellites; Simple sequence repeats; Vitis

Indexed keywords

GENETIC DIVERSITY; GENOTYPE; GRAPEVINE; MICROSATELLITE DNA; PORTUGIESER BLAU; PORTUGIESER GRUN;

EID: 0031892224     PISSN: 00427500     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (34)

1. BOTTA, R.; SCOTT, N. S.; EYNARD, I.; THOMAS, M. R.; 1995: Evaluation of microsatellite sequence-tagged site markers for characterizing Vitis vinifera cultivars. Vitis 34, 99-102.
2. BOURQUIN, J. C.; OTTEN, L.; WALTER, B.; 1995: PCR-RFLP analysis of Vitis, Ampelopsis and Parthenocissus and its application to the identification of rootstocks. Vitis 34, 103-108.
3. _ _; SONCO, A.; OTTEN, L.; WALTER, B.; 1993: Restriction fragment length polymorphism and molecular taxonomy in Vitis vinifera L. Theor. Appl. Genet. 87, 431-438.
4. _ _; TOURNIER, P.; OTTEN, L.; WALTER, B. ; 1992: Identification of sixteen grapevine rootstocks by RFLP and RFLP analysis of nuclear DNA extracted from the wood. Vitis 31, 157-162.
5. BOWERS, J. E.; BANDMAN, E. B.; MEREDITH, C. P.; 1993: DNA fingerprint characterization of some wine grape cultivars. Amer. J. Enol. Viticult. 44, 266-274.
6. _ _; DANGL, G. S.; VIGNANI, R.; MEREDITH, C. P.; 1996: Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L.). Genome 39, 628-633.
7. _ _; MEREDITH, C. P.; 1997: The parentage of a classic wine grape, Cabernet Sauvignon. Nat. Gen. 16, 84-87.
8. BROOKFIELD, J. F. Y.; 1996: A simple new method for estimating null allele frequency from heterozygote deficiency. Mol. Ecol. 5, 453-455.
9. BÜSCHER, N.; ZYPRIAN, E.; BLAICH, R.; 1993: Identification of grapevine cultivars by DNA analysis: Pitfalls of random amplified polymorphic DNA techniques using 10mer primers. Vitis 32, 187-188.
10. CIPRIANI, G.; FRAZZA, G.; PETERLUNGER, E.; TESTOLIN, R. ; 1994: Grapevine fingerprinting using microsatellite repeats. Vitis 33, 211-215.
11. COLLINS, G.; SYMONS, R.; 1993: Polymorphism in grapevine DNA detected by the RAPD PCR technique. Pl. Mol. Biol. Reptr. 11 (2), 105-112.
12. FELSENSTEIN, J.; 1989: PHYLIP - Phylogeny Inference Package. Cladistics 5, 164-166.
13. nd ed. Imprimerie Charles Dehan, Montpellier, France.
14. GOGORCENA, Y.; ARULSEKAR, S.; DANDEKAR, A. M.; PARFITT, D. E.; 1993: Molecular markers for grape characterization. Vitis 32, 183-185.
15. GUERRA, B.; MEREDITH, C. P.; 1995: Comparison of Vitis berlandieri x Vitis riparia rootstock cultivars by restriction fragment length polymorphism analysis. Vitis 34, 109-112.
16. HU, G.; 1993: DNA polymerase-catalyzed addition of nontemplated extra nucleotides to the 3́ end of a DNA fragment. DNA Cell Biol. 12 (8), 763-770.
17. JEAN-JAQUES, I.; DEFONTAINE, A.; HALLET, J. N.; 1993: Characterization of Vitis vinifera cultivars by random amplified polymorphic DNA markers. Vitis 32, 189-190.
18. MAURO, M. C.; STREFELER, M.; WEEDEN, N. F.; REISCH, B. I.; 1992: Genetic analysis of restriction fragment length polymorphism in Vitis. J. Hered. 83, 18-21.
19. MCPEARSON, J. M.; ECKSTEIN, P. E.; SCOLES, G. J.; GAJADHAR, A. A.; 1993: Variability of the random amplified polymorphic DNA assay among thermal cyclers, and effects of primer and DNA concentration. Mol. Cell. Probes 7, 293-299.
20. NEI, M.; 1973: Analysis of gene diversity in subdivided populations. Proc. Nat. Acad. Sci. USA 70, 3321-3323.
21. PAGE, R. D. M.; 1996: TREEVIEW: An application to display phylogenetic trees on personal computers. Comp. Applic. Biosci. 12, 357-358.
22. PARFITT, D. E.; ARULSEKAR, S.; 1989: Study of the parentage of grape cultivars by genetic interpretation of GPI-2 and PGM-2 isozymes. Euphytica 65, 195-202.
23. REGNER, F.; MESSNER, R.; 1993: Molekulare Differenzierung von Rebsorten mittels RAPD-Analyse. Mitt. Klosterneuburg 43, 160-164.
24. _ _; STEINKELLNER, H.; TURETSCHEK, E.; STADLHUBER, A.; GLOSSL, J.; 1996: Genetische Charakterisierung von Rebsorten (Vitis vinifera) durch Mikrosatelliten-Analyse. Mitt. Klosterneuburg 46, 52-60.
25. SCHNEIDER, A.; 1996: Grape variety identification by means of ampelographic and biometric descriptors. Riv. Viticolt. Enol. 49 (1), 11-16.
26. SEFC, K. M.; STEINKELLNER, H.; GLÖSSL, J.; KAMPFER, S.; REGNER, F.; 1998: Reconstruction of a grapevine pedigree by microsatellite analysis. Theoret. Appl. Genet., accepted.
27. _ _; _ _; WAGNER, H. W.; GLÖSSL, J.; REGNER, F.; 1997: Application of microsatellite markers to parentage studies in grapevine. Vitis 36, 179-183.
28. SMITH, J. R.; CARPTEN, J. D.; BROWNSTEIN, M. J.; GHOSH, S., MAGNUSON, V. L.; GILBERT, D. A.; TRENT, J. M.; COLLINS, F. S.; 1995: Approach to genotyping errors caused by nontemplated nucleotide addition by Taq DNA polymerase. Genome Res. 5, 312-317.
29. STRIEM, M. J.; SPIEGEL-ROY, P.; BEN-HAYYIM, G.; BECKMANN, J.; GIDONI, D.; 1990: Genomic DNA fingerprinting of Vitis vinifera by the use of multi-loci probes. Vitis 29, 223-227.
30. THOMAS, M. R.; CAIN, P.; SCOTT, N. S.; 1994: DNA typing of grapevines: A universal methodology and database for describing cultivars and evaluating genetic relatedness. Plant Mol. Biol. 25, 939-949.
31. _ _; MATSUMOTO, S.; CAIN, P.; SCOTT, N. S.; 1993: Repetitive DNA of grapevine: classes present and sequences suitable for cultivar identification. Theoret. Appl. Genet. 86, 173-180.
32. _ _; SCOTT, N. S.; 1993: Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence-tagged sites (STSs). Theoret. Appl. Genet. 86, 985-990.
33. TSCHAMMER, J.; ZYPRIAN, E.; 1994: Molecular characterization of grapevine cultivars of Riesling-type and of closely related Burgundies. Vitis 33, 249-250.
34. WALTERS; T. W.; POSLUSZNY, U.; KEVAN, P. G.; 1989: Isozyme analysis of the grape (Vitis). A practical solution. Can. J. Bot. 67, 2894-2899.