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Volumn 22, Issue 3, 1998, Pages 158-166

A whole-genome analysis of allelic changes in renal cell carcinoma by in-gel competitive reassociation

Author keywords

DNA subtraction; Loss of heterozygosity; Renal cell carcinoma

Indexed keywords

ARTICLE; CHROMOSOME 8; CHROMOSOME 9; CONTROLLED STUDY; GENE MAPPING; GENETIC ANALYSIS; GENOME; HUMAN; HUMAN TISSUE; KIDNEY CARCINOMA; MOLECULAR CLONING; PRIORITY JOURNAL;

EID: 0031855372     PISSN: 08991987     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1098-2744(199807)22:3<158::AID-MC3>3.0.CO;2-H     Document Type: Article
Times cited : (7)

References (42)
  • 1
    • 0025975990 scopus 로고
    • Allelotype of renal cell carcinoma
    • Morita R, Ishikawa J, Tsutsumi M, et al. Allelotype of renal cell carcinoma. Cancer Res 51:820-823, 1991.
    • (1991) Cancer Res , vol.51 , pp. 820-823
    • Morita, R.1    Ishikawa, J.2    Tsutsumi, M.3
  • 2
    • 0026029404 scopus 로고
    • Allelic loss of chromosome 3p characterizes clear cell phenotype of renal cell carcinoma
    • Ogawa O, Kakehi Y, Ogawa K, Koshiba M, Sugiyama T, Yoshiba O. Allelic loss of chromosome 3p characterizes clear cell phenotype of renal cell carcinoma. Cancer Res 51:949-953, 1991.
    • (1991) Cancer Res , vol.51 , pp. 949-953
    • Ogawa, O.1    Kakehi, Y.2    Ogawa, K.3    Koshiba, M.4    Sugiyama, T.5    Yoshiba, O.6
  • 4
    • 0028868209 scopus 로고
    • Localization of tumor suppressor loci on chromosome 9 in primary human renal cell carcinomas
    • Cairns P, Tokino K, Eby Y, Sidransky D. Localization of tumor suppressor loci on chromosome 9 in primary human renal cell carcinomas. Cancer Res 55:224-227, 1995.
    • (1995) Cancer Res , vol.55 , pp. 224-227
    • Cairns, P.1    Tokino, K.2    Eby, Y.3    Sidransky, D.4
  • 5
    • 0028886532 scopus 로고
    • Loss of heterozygosity at the familial RCC t(3;8) locus in most clear cell renal carcinomas
    • Druck T, Kastury K, Hadaczek P, et al. Loss of heterozygosity at the familial RCC t(3;8) locus in most clear cell renal carcinomas. Cancer Res 55:5348-5353, 1995.
    • (1995) Cancer Res , vol.55 , pp. 5348-5353
    • Druck, T.1    Kastury, K.2    Hadaczek, P.3
  • 6
    • 0028790326 scopus 로고
    • Terminal deletion of chromosome 3p sequences in nonpapillary renal cell carcinomas: A breakpoint cluster between loci D3S1285 and D3S1603
    • Wilhelm M, Bugert P, Kenck C, Staehler G, Kovacs G. Terminal deletion of chromosome 3p sequences in nonpapillary renal cell carcinomas: A breakpoint cluster between loci D3S1285 and D3S1603. Cancer Res 55:5383-5385, 1995.
    • (1995) Cancer Res , vol.55 , pp. 5383-5385
    • Wilhelm, M.1    Bugert, P.2    Kenck, C.3    Staehler, G.4    Kovacs, G.5
  • 7
    • 0029890634 scopus 로고    scopus 로고
    • Allelic losses at chromosomes 1p, 2p, 6p, 10p, 13q, 17p, and 21q significantly correlate with the chromophobe subtype of renal cell carcinoma
    • Schwerdtle RF, Storkel S, Neuhaus C, et al. Allelic losses at chromosomes 1p, 2p, 6p, 10p, 13q, 17p, and 21q significantly correlate with the chromophobe subtype of renal cell carcinoma. Cancer Res 56:2927-2930, 1996.
    • (1996) Cancer Res , vol.56 , pp. 2927-2930
    • Schwerdtle, R.F.1    Storkel, S.2    Neuhaus, C.3
  • 8
    • 0027240519 scopus 로고
    • Identification of the von Hippel-Lindau disease tumor suppressor gene
    • Latif F, Tory K, Gnarra JR, et al. Identification of the von Hippel-Lindau disease tumor suppressor gene. Science 260:1317-1320, 1993.
    • (1993) Science , vol.260 , pp. 1317-1320
    • Latif, F.1    Tory, K.2    Gnarra, J.R.3
  • 9
    • 0027954044 scopus 로고
    • Mutations of the VHL tumor suppressor gene in renal carcinoma
    • Gnarra JR, Tory K, Weng Y, et al. Mutations of the VHL tumor suppressor gene in renal carcinoma. Nat Genet 7:85-90, 1994.
    • (1994) Nat Genet , vol.7 , pp. 85-90
    • Gnarra, J.R.1    Tory, K.2    Weng, Y.3
  • 10
    • 0028235907 scopus 로고
    • Frequent somatic mutations and loss of heterozygosity of the von Nippel-Lindau tumor suppressor gene in primary human renal cell carcinomas
    • Shuin T, Kondo K, Torigoe S, et al. Frequent somatic mutations and loss of heterozygosity of the von Nippel-Lindau tumor suppressor gene in primary human renal cell carcinomas. Cancer Res 54:2852-2855, 1994.
    • (1994) Cancer Res , vol.54 , pp. 2852-2855
    • Shuin, T.1    Kondo, K.2    Torigoe, S.3
  • 11
    • 0028129399 scopus 로고
    • Specific loss of chromosomes 1, 2, 6, 10, 13, 17, and 21 in chromophobe renal cell carcinomas revealed by comparative genomic hybridization
    • Speicher MR, Schoell B, du Manoir S, et al. Specific loss of chromosomes 1, 2, 6, 10, 13, 17, and 21 in chromophobe renal cell carcinomas revealed by comparative genomic hybridization. Am J Pathol 145:356-364, 1994.
    • (1994) Am J Pathol , vol.145 , pp. 356-364
    • Speicher, M.R.1    Schoell, B.2    Du Manoir, S.3
  • 12
    • 0028939263 scopus 로고
    • Comparative genomic analysis of tumors: Detection of DNA losses and amplification
    • Lisitsyn NA, Lisitsina NM, Dalbagni G, et al. Comparative genomic analysis of tumors: Detection of DNA losses and amplification. Proc Natl Acad Sci USA 92:151-155, 1995.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 151-155
    • Lisitsyn, N.A.1    Lisitsina, N.M.2    Dalbagni, G.3
  • 13
    • 0030040471 scopus 로고    scopus 로고
    • Genetic aberrations detected by comparative genomic hybridization are associated with clinical outcome in renal cell carcinoma
    • Moch H, Presti JJC, Sauter G, et al. Genetic aberrations detected by comparative genomic hybridization are associated with clinical outcome in renal cell carcinoma. Cancer Res 56:27-30, 1996.
    • (1996) Cancer Res , vol.56 , pp. 27-30
    • Moch, H.1    Presti, J.J.C.2    Sauter, G.3
  • 14
    • 0028091126 scopus 로고
    • Molecular genetic investigation of sporadic renal cell carcinoma: Analysis of allele loss on chromosomes 3p, 5q, 11p, 17 and 22
    • Foster K, Crossey PA, Cairns P, et al. Molecular genetic investigation of sporadic renal cell carcinoma: Analysis of allele loss on chromosomes 3p, 5q, 11p, 17 and 22. Br J Cancer 69:230-234, 1994.
    • (1994) Br J Cancer , vol.69 , pp. 230-234
    • Foster, K.1    Crossey, P.A.2    Cairns, P.3
  • 15
    • 0028930201 scopus 로고
    • Comprehensive allelotyping of human renal cell carcinomas using microsatellite DNA probes
    • Thrash-Bingham CA, Greenberg RE, Howard S, et al. Comprehensive allelotyping of human renal cell carcinomas using microsatellite DNA probes. Proc Natl Acad Sci USA 92:2854-2858, 1995.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 2854-2858
    • Thrash-Bingham, C.A.1    Greenberg, R.E.2    Howard, S.3
  • 16
    • 0028864564 scopus 로고
    • Genomic alterations and instabilities in renal cell carcinomas and their relationship to tumor pathology
    • Thrash-Bingham CA, Salazar H, Freed JJ, Greenberg RE, Tartof. KD. Genomic alterations and instabilities in renal cell carcinomas and their relationship to tumor pathology. Cancer Res 55:6189-6195, 1995.
    • (1995) Cancer Res , vol.55 , pp. 6189-6195
    • Thrash-Bingham, C.A.1    Salazar, H.2    Freed, J.J.3    Greenberg, R.E.4    Tartof, K.D.5
  • 17
    • 0025142475 scopus 로고
    • Differential cloning of genomic DNA: Cloning of DNA with an altered primary structure by in-gel competitive reassociation
    • Yokota H, Oishi M. Differential cloning of genomic DNA: Cloning of DNA with an altered primary structure by in-gel competitive reassociation. Proc Natl Acad Sci USA 87:6398-6402, 1990.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 6398-6402
    • Yokota, H.1    Oishi, M.2
  • 19
    • 0028946867 scopus 로고
    • A differential cloning procedure for rearranged or altered genomic DNA based on in-gel competitive reassociation
    • Kiyama R, Inoue S, Ohki R, Kikuya E, Yokota H, Oishi M. A differential cloning procedure for rearranged or altered genomic DNA based on in-gel competitive reassociation. Adv Biophys 31:151-161, 1995.
    • (1995) Adv Biophys , vol.31 , pp. 151-161
    • Kiyama, R.1    Inoue, S.2    Ohki, R.3    Kikuya, E.4    Yokota, H.5    Oishi, M.6
  • 20
    • 0028936665 scopus 로고
    • Analysis of recombination junctions in extrachromosomal circular DNA obtained by in-gel competitive reassociation
    • Iwasaki T, Ohki R, Kiyama R, Oishi M. Analysis of recombination junctions in extrachromosomal circular DNA obtained by in-gel competitive reassociation. FEBS Lett 363:239-245, 1995.
    • (1995) FEBS Lett , vol.363 , pp. 239-245
    • Iwasaki, T.1    Ohki, R.2    Kiyama, R.3    Oishi, M.4
  • 21
    • 0030050407 scopus 로고    scopus 로고
    • Construction of highly extensive polymorphic DNA libraries by in-gel competitive reassociation procedure
    • Inoue S, Kiyama R, Oishi M. Construction of highly extensive polymorphic DNA libraries by in-gel competitive reassociation procedure. Genomics 31:271-276, 1996.
    • (1996) Genomics , vol.31 , pp. 271-276
    • Inoue, S.1    Kiyama, R.2    Oishi, M.3
  • 22
    • 0029655195 scopus 로고
    • Construction of libraries for methylation sites by in-gel competitive reassociation (IGCR)
    • Mizuguchi R, Inoue S, Kiyama R, Oishi M. Construction of libraries for methylation sites by in-gel competitive reassociation (IGCR). DNA Res 2:219-223, 1995.
    • (1995) DNA Res , vol.2 , pp. 219-223
    • Mizuguchi, R.1    Inoue, S.2    Kiyama, R.3    Oishi, M.4
  • 23
    • 0028051816 scopus 로고
    • Highly efficient method for obtaining a subtracted genomic DNA library by the modified in-gel competitive reassociation method
    • Sasaki H, Nomura S, Akiyama N, et al. Highly efficient method for obtaining a subtracted genomic DNA library by the modified in-gel competitive reassociation method. Cancer Res 54:5821-5823, 1994.
    • (1994) Cancer Res , vol.54 , pp. 5821-5823
    • Sasaki, H.1    Nomura, S.2    Akiyama, N.3
  • 25
    • 0021378551 scopus 로고
    • Nucleotide sequence of the human c-myc locus: Provocative open reading frame within the first exon
    • Gazin C, Dupont S, de Dinechin D, et al. Nucleotide sequence of the human c-myc locus: Provocative open reading frame within the first exon. EMBO J 3:383-387, 1984.
    • (1984) EMBO J , vol.3 , pp. 383-387
    • Gazin, C.1    Dupont, S.2    De Dinechin, D.3
  • 26
    • 0026574906 scopus 로고
    • Loss of heterozygosity affecting the p53, Rb, and mcc/apc tumor suppressor gene loci in dysplastic and cancerous ulcerative colitis
    • Greenwald BD, Harpaz N, Yin J, et al. Loss of heterozygosity affecting the p53, Rb, and mcc/apc tumor suppressor gene loci in dysplastic and cancerous ulcerative colitis. Cancer Res 52:741-745, 1992.
    • (1992) Cancer Res , vol.52 , pp. 741-745
    • Greenwald, B.D.1    Harpaz, N.2    Yin, J.3
  • 27
    • 0028231090 scopus 로고
    • The 1993-94 Genethon human genetic linkage map
    • Gyapay G, Morissette J, Vignal A, et al. The 1993-94 Genethon human genetic linkage map. Nat Genet 7:246-339, 1994.
    • (1994) Nat Genet , vol.7 , pp. 246-339
    • Gyapay, G.1    Morissette, J.2    Vignal, A.3
  • 28
    • 0026332706 scopus 로고
    • A cluster of highly polymorphic dinucleotide repeats in intron 17b of the cystic fibrosis transmembrane conductance regulator (CFTR) gene
    • Zielenski J, Markiewicz D, Rininsland F, Rommens J, Tsui LC. A cluster of highly polymorphic dinucleotide repeats in intron 17b of the cystic fibrosis transmembrane conductance regulator (CFTR) gene. Arn J Hum Genet 49:1256-1262, 1991.
    • (1991) Arn J Hum Genet , vol.49 , pp. 1256-1262
    • Zielenski, J.1    Markiewicz, D.2    Rininsland, F.3    Rommens, J.4    Tsui, L.C.5
  • 29
    • 0027953579 scopus 로고
    • Loss of heterozygosity and p53 gene mutations in breast cancer
    • Deng G, Chen L-C, Schott DR, et al. Loss of heterozygosity and p53 gene mutations in breast cancer. Cancer Res 54:499-505, 1994.
    • (1994) Cancer Res , vol.54 , pp. 499-505
    • Deng, G.1    Chen, L.-C.2    Schott, D.R.3
  • 31
    • 0021771149 scopus 로고
    • Human satellite I sequences include a male specific 2.47 kb tandemly repeated unit containing one Alu family member per repeat
    • Frommer M, Prosser J, Vincent PC. Human satellite I sequences include a male specific 2.47 kb tandemly repeated unit containing one Alu family member per repeat. Nucleic Acids Res 12:2887-2900, 1984.
    • (1984) Nucleic Acids Res , vol.12 , pp. 2887-2900
    • Frommer, M.1    Prosser, J.2    Vincent, P.C.3
  • 32
    • 0026021052 scopus 로고
    • Novel DNA sequences at chromosome 10q26 are amplified in human gastric carcinoma cell lines: Molecular cloning by competitive DNA reassociation
    • Mor O, Messinger Y, Rotman G, et al. Novel DNA sequences at chromosome 10q26 are amplified in human gastric carcinoma cell lines: Molecular cloning by competitive DNA reassociation. Nucleic Acids Res 19:117-123, 1991.
    • (1991) Nucleic Acids Res , vol.19 , pp. 117-123
    • Mor, O.1    Messinger, Y.2    Rotman, G.3
  • 33
    • 0025111437 scopus 로고
    • Isolation of an amplified DNA sequence in stomach cancer
    • Nakatani H, Sakamoto H, Yoshida T, et al. Isolation of an amplified DNA sequence in stomach cancer. Jpn J Cancer Res 81:707-710, 1990.
    • (1990) Jpn J Cancer Res , vol.81 , pp. 707-710
    • Nakatani, H.1    Sakamoto, H.2    Yoshida, T.3
  • 34
    • 0028773892 scopus 로고
    • Polymorphisms, but lack of mutations or instability, in the promoter region of the mitochondrial genome in human colonic tumors
    • Heerdt BG, Chen J, Stewart LR, Augenlicht LH. Polymorphisms, but lack of mutations or instability, in the promoter region of the mitochondrial genome in human colonic tumors. Cancer Res 54:3912-3915, 1994.
    • (1994) Cancer Res , vol.54 , pp. 3912-3915
    • Heerdt, B.G.1    Chen, J.2    Stewart, L.R.3    Augenlicht, L.H.4
  • 35
    • 0026664420 scopus 로고
    • Mitochondrial and chromosomal DNA alterations in human chromophobe renal cell carcinomas
    • Kovacs A, Storkel S, Thoenes W, Kovacs G. Mitochondrial and chromosomal DNA alterations in human chromophobe renal cell carcinomas. J Pathol 167:273-277, 1992.
    • (1992) J Pathol , vol.167 , pp. 273-277
    • Kovacs, A.1    Storkel, S.2    Thoenes, W.3    Kovacs, G.4
  • 36
    • 0029019959 scopus 로고
    • Mitochondrial DNA mutations in normal and tumor tissues from breast cancer patients
    • Bianchi MS, Bianchi NO, Bailliet G. Mitochondrial DNA mutations in normal and tumor tissues from breast cancer patients. Cytogenet Cell Genet 71:99-103, 1995.
    • (1995) Cytogenet Cell Genet , vol.71 , pp. 99-103
    • Bianchi, M.S.1    Bianchi, N.O.2    Bailliet, G.3
  • 37
    • 0028265754 scopus 로고
    • Analysis of nuclear and mitochondrial DNA alterations in thyroid and renal oncocytic tumors
    • Tallini G, Ladanyi M, Rosai J, Jhanwar SC. Analysis of nuclear and mitochondrial DNA alterations in thyroid and renal oncocytic tumors. Cytogenet Cell Genet 66:253-259, 1994.
    • (1994) Cytogenet Cell Genet , vol.66 , pp. 253-259
    • Tallini, G.1    Ladanyi, M.2    Rosai, J.3    Jhanwar, S.C.4
  • 38
    • 0030879277 scopus 로고    scopus 로고
    • Identification of the tuberous sclerosis gene TSC1 on chromosome 9q34
    • van Slegtenhorst M, de Hoogt R, Hermans C, et al. Identification of the tuberous sclerosis gene TSC1 on chromosome 9q34. Science 277:805-808, 1997.
    • (1997) Science , vol.277 , pp. 805-808
    • Van Slegtenhorst, M.1    De Hoogt, R.2    Hermans, C.3
  • 39
    • 0028844192 scopus 로고
    • Multifocal renal cell carcinoma in sibs from a chromosome 9 linked (TSC1) tuberous sclerosis family
    • Sampson JR, Patel A, Mee AD. Multifocal renal cell carcinoma in sibs from a chromosome 9 linked (TSC1) tuberous sclerosis family. J Med Genet 32:848-850, 1995.
    • (1995) J Med Genet , vol.32 , pp. 848-850
    • Sampson, J.R.1    Patel, A.2    Mee, A.D.3
  • 40
    • 10344222964 scopus 로고    scopus 로고
    • Evidence for two tumor suppressor loci associated with proximal chromosome 9p to q and distal chromosome 9q in bladder cancer and the initial screening for GAS1 and PTC mutations
    • Simoneau AR, Spruck CH 3rd, Gonzalez-Zulueta M, et al. Evidence for two tumor suppressor loci associated with proximal chromosome 9p to q and distal chromosome 9q in bladder cancer and the initial screening for GAS1 and PTC mutations. Cancer Res 56:5039-5043, 1996.
    • (1996) Cancer Res , vol.56 , pp. 5039-5043
    • Simoneau, A.R.1    Spruck III, C.H.2    Gonzalez-Zulueta, M.3
  • 41
    • 0028898538 scopus 로고
    • Mutations of the p53 gene and p53 protein overexpression are associated with sarcomatoid transformation in renal cell carcinomas
    • Oda H, Nakatsuru Y, Ishikawa T. Mutations of the p53 gene and p53 protein overexpression are associated with sarcomatoid transformation in renal cell carcinomas. Cancer Res 55:658-662, 1995.
    • (1995) Cancer Res , vol.55 , pp. 658-662
    • Oda, H.1    Nakatsuru, Y.2    Ishikawa, T.3
  • 42
    • 0021154199 scopus 로고
    • Human epidermal growth factor receptor cDNA is homologous to a variety of RNAs overproduced in A431 carcinoma cells
    • Xu Y-H, Ishii S, Clark AJL, et al. Human epidermal growth factor receptor cDNA is homologous to a variety of RNAs overproduced in A431 carcinoma cells. Nature 309:806-810, 1984.
    • (1984) Nature , vol.309 , pp. 806-810
    • Xu, Y.-H.1    Ishii, S.2    Clark, A.J.L.3


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