메뉴 건너뛰기




Volumn 75, Issue 1, 1998, Pages 513-520

Scanning force microscopy of DNA molecules elongated by convective fluid flow in an evaporating droplet

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOPHAGE DNA;

EID: 0031836779     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(98)77540-X     Document Type: Article
Times cited : (64)

References (48)
  • 4
    • 0000734376 scopus 로고
    • Stretching DNA with a receding meniscus: Experiments and models
    • Bensimon, D., A. Simon, V. Croquette, and A. Bensimon. 1995. Stretching DNA with a receding meniscus: experiments and models. Phys. Rev. Lett. 74:4754-4757.
    • (1995) Phys. Rev. Lett. , vol.74 , pp. 4754-4757
    • Bensimon, D.1    Simon, A.2    Croquette, V.3    Bensimon, A.4
  • 6
    • 0029252016 scopus 로고
    • Adsorption of DNA to mica, silylated mica, and minerals: Characterization by atomic force microscopy
    • Bezanilla, M., S. Manne, D. E. Laney, Y. L. Lyubchenko, and H. G. Hansma. 1995. Adsorption of DNA to mica, silylated mica, and minerals: characterization by atomic force microscopy. Langmuir. 11: 655-659.
    • (1995) Langmuir , vol.11 , pp. 655-659
    • Bezanilla, M.1    Manne, S.2    Laney, D.E.3    Lyubchenko, Y.L.4    Hansma, H.G.5
  • 8
    • 0029970157 scopus 로고    scopus 로고
    • Visualizing protein-nucleic acid interactions on a large scale with the scanning force microscope
    • Bustamante, C., and C. Rivetti. 1996. Visualizing protein-nucleic acid interactions on a large scale with the scanning force microscope. Annu. Rev. Biophys. Biomol. Struct. 25:395-429.
    • (1996) Annu. Rev. Biophys. Biomol. Struct. , vol.25 , pp. 395-429
    • Bustamante, C.1    Rivetti, C.2
  • 10
    • 0029060384 scopus 로고
    • Ordered restriction endonuclease maps of yeast artificial chromosomes created by optical mapping on surfaces
    • Cai, W., H. Aburatani, V. P. Stanton, Jr., D. E. Housman, Y. K. Wang, and D. C. Schwartz. 1995. Ordered restriction endonuclease maps of yeast artificial chromosomes created by optical mapping on surfaces. Proc. Natl. Acad. Sci. USA. 92:5164-5168.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 5164-5168
    • Cai, W.1    Aburatani, H.2    Stanton V.P., Jr.3    Housman, D.E.4    Wang, Y.K.5    Schwartz, D.C.6
  • 12
    • 0017756095 scopus 로고
    • The molecular complexity of G DNA
    • Dore, E., C. Frontali, and M. Grignoli. 1977. The molecular complexity of G DNA. Virology. 79:442-445.
    • (1977) Virology , vol.79 , pp. 442-445
    • Dore, E.1    Frontali, C.2    Grignoli, M.3
  • 13
    • 0015329983 scopus 로고
    • Initiation and replication of DNA synthesis during replication of bacteriophage T7
    • Dressier, D., J. Wolfson, and M. Magazin. 1971. Initiation and replication of DNA synthesis during replication of bacteriophage T7. Proc. Natl. Acad. Sci. USA. 69:998-1002.
    • (1971) Proc. Natl. Acad. Sci. USA , vol.69 , pp. 998-1002
    • Dressier, D.1    Wolfson, J.2    Magazin, M.3
  • 14
    • 0027365639 scopus 로고
    • Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd, and Cd
    • Duguid, J. G., V. A. Bloomfield, J. M. Benevides, and G. J. Thomas, Jr. 1993. Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd, and Cd. Biophys. J. 65:1916-1928.
    • (1993) Biophys. J. , vol.65 , pp. 1916-1928
    • Duguid, J.G.1    Bloomfield, V.A.2    Benevides, J.M.3    Thomas G.J., Jr.4
  • 16
    • 0028631162 scopus 로고
    • DNA bending by Cro protein in specific and nonspecific complexes: Implications for protein site recognition and specificity
    • Erie, D. A., G. Yang, H. C. Schultz, and C. Bustamante. 1994. DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity. Science. 266: 1562-1566.
    • (1994) Science , vol.266 , pp. 1562-1566
    • Erie, D.A.1    Yang, G.2    Schultz, H.C.3    Bustamante, C.4
  • 17
    • 0017837317 scopus 로고
    • Separation of very large DNA molecules by gel electrophoresis
    • Fangman, W. L. 1978. Separation of very large DNA molecules by gel electrophoresis. Nucleic Acids Res. 5:653-666.
    • (1978) Nucleic Acids Res. , vol.5 , pp. 653-666
    • Fangman, W.L.1
  • 18
    • 33947474324 scopus 로고
    • The ion-exchange properties of muscovite mica
    • Gaines, Jr., G. L. 1957. The ion-exchange properties of muscovite mica. J. Phys. Chem. 61:1408-1413.
    • (1957) J. Phys. Chem. , vol.61 , pp. 1408-1413
    • Gaines G.L., Jr.1
  • 19
    • 5544228349 scopus 로고    scopus 로고
    • Atomic force microscopy of biomolecules
    • Hansma, H. G. 1996. Atomic force microscopy of biomolecules. J. Vac. Sci. Technol. B14:1390-1394.
    • (1996) J. Vac. Sci. Technol. , vol.B14 , pp. 1390-1394
    • Hansma, H.G.1
  • 21
    • 0028364295 scopus 로고
    • Biomolecular imaging with atomic force microscope
    • Hansma, H. G., and J. Hoh. 1994. Biomolecular imaging with atomic force microscope. Annu. Rev. Biophys. Biomol. Struct. 23:115-39.
    • (1994) Annu. Rev. Biophys. Biomol. Struct. , vol.23 , pp. 115-139
    • Hansma, H.G.1    Hoh, J.2
  • 22
    • 0029863919 scopus 로고    scopus 로고
    • DNA binding to mica correlates with cationic radius: Assay by atomic force microscopy
    • Hansma, H. G., and D. E. Lancey. 1996a. DNA binding to mica correlates with cationic radius: assay by atomic force microscopy. Biophys. J. 70:1933-39.
    • (1996) Biophys. J. , vol.70 , pp. 1933-1939
    • Hansma, H.G.1    Lancey, D.E.2
  • 24
    • 0029866788 scopus 로고    scopus 로고
    • Atomic force microscopy of long and short double-stranded, single-stranded and triple-stranded nucleic acids
    • Hansma, H. G., I. Revenko, K. Kim, and D. E. Laney. 1996b. Atomic force microscopy of long and short double-stranded, single-stranded and triple-stranded nucleic acids. Nucleic Acids Res. 24:713-720.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 713-720
    • Hansma, H.G.1    Revenko, I.2    Kim, K.3    Laney, D.E.4
  • 25
    • 84960604029 scopus 로고
    • Imaging and nanodissection of individual supercoiled plasmids by atomic force microscopy
    • Henderson, E. 1992. Imaging and nanodissection of individual supercoiled plasmids by atomic force microscopy. Nucleic Acids Res. 20:445-447.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 445-447
    • Henderson, E.1
  • 26
    • 0030567303 scopus 로고    scopus 로고
    • Imaging of single extended DNA molecules on flat (aminopropyl)triethoxysilane-mica by atomic force microscopy
    • Hu, J., M. Wang, H.-U. G. Weier, P. Frantz, W. Kolbe, D. F. Ogletree, and M. Salmeron. 1996. Imaging of single extended DNA molecules on flat (aminopropyl)triethoxysilane-mica by atomic force microscopy. Langmuir. 12:1697-1700.
    • (1996) Langmuir. , vol.12 , pp. 1697-1700
    • Hu, J.1    Wang, M.2    Weier, H.-U.G.3    Frantz, P.4    Kolbe, W.5    Ogletree, D.F.6    Salmeron, M.7
  • 27
    • 0028919169 scopus 로고
    • Two-dimensional motion of DNA bands during 120° pulsed-field gel electrophresis. I. Effect of molecular weight
    • Hutson, M. S., G. Holzwarth, T. Duke, and J.-L. Viovy. 1995. Two-dimensional motion of DNA bands during 120° pulsed-field gel electrophresis. I. Effect of molecular weight. Biopolymers. 35:297-306.
    • (1995) Biopolymers , vol.35 , pp. 297-306
    • Hutson, M.S.1    Holzwarth, G.2    Duke, T.3    Viovy, J.-L.4
  • 29
    • 0015367619 scopus 로고
    • Electron microscope studies of heteroduplex DNA from a deletion mutant of bacteriophage φX-174
    • Kim, J.-S., P. A. Sharp, and N. Davidson. 1972. Electron microscope studies of heteroduplex DNA from a deletion mutant of bacteriophage φX-174. Proc. Natl. Acad. Sci. USA. 69:1948-1952.
    • (1972) Proc. Natl. Acad. Sci. USA , vol.69 , pp. 1948-1952
    • Kim, J.-S.1    Sharp, P.A.2    Davidson, N.3
  • 31
    • 0031017249 scopus 로고    scopus 로고
    • Visualization of supercoiled DNA with atomic force microscopy in situ
    • Lyubchenko, Y. L., and L. S. Shlyyakhtenko. 1997. Visualization of supercoiled DNA with atomic force microscopy in situ. Proc. Natl. Acad. Sci. USA. 94:496-501.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 496-501
    • Lyubchenko, Y.L.1    Shlyyakhtenko, L.S.2
  • 33
    • 0028950997 scopus 로고
    • Optical mapping of lambda bacteriophage clones using restriction endonucleases
    • Meng, X., K. Benson, K. Chada, E. J. Huff, and D. C. Schwartz. 1995. Optical mapping of lambda bacteriophage clones using restriction endonucleases. Nature Genet. 9:432-438.
    • (1995) Nature Genet. , vol.9 , pp. 432-438
    • Meng, X.1    Benson, K.2    Chada, K.3    Huff, E.J.4    Schwartz, D.C.5
  • 34
    • 0029127492 scopus 로고
    • High-resolution atomic-force microscopy of DNA: The pitch of the double helix
    • Mou, J., D. M. Czajkowsky, Y. Zhang, and Z. Shao. 1995. High-resolution atomic-force microscopy of DNA: the pitch of the double helix. FEBS Lett. 371:279-282.
    • (1995) FEBS Lett. , vol.371 , pp. 279-282
    • Mou, J.1    Czajkowsky, D.M.2    Zhang, Y.3    Shao, Z.4
  • 35
    • 0029638377 scopus 로고
    • Stretching of a single tethered polymer in a uniform flow
    • Perkins, T. T., D. E. Smith, R. G. Larson, and S. Chu. 1995. Stretching of a single tethered polymer in a uniform flow. Science. 268:83-87.
    • (1995) Science , vol.268 , pp. 83-87
    • Perkins, T.T.1    Smith, D.E.2    Larson, R.G.3    Chu, S.4
  • 36
    • 0027244844 scopus 로고
    • Evidence of DNA bending in transcription complexes imaged by scanning force microscopy
    • Rees, W. A., R. W. Keller, J. P. Vesenka, C. Yang, and C. Bustamante. 1993. Evidence of DNA bending in transcription complexes imaged by scanning force microscopy. Science. 260:1646-1649.
    • (1993) Science , vol.260 , pp. 1646-1649
    • Rees, W.A.1    Keller, R.W.2    Vesenka, J.P.3    Yang, C.4    Bustamante, C.5
  • 37
    • 0021153574 scopus 로고
    • Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis
    • Schwartz, D. C., and C. R. Cantor. 1984. Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis. Cell. 37:67-75.
    • (1984) Cell. , vol.37 , pp. 67-75
    • Schwartz, D.C.1    Cantor, C.R.2
  • 38
    • 0027485082 scopus 로고
    • Ordered restriction maps of Saccharomyces cerevisiae chromosomes constructed by optical mapping
    • Schwartz, D. C., X. Li, L. I. Hernandez, S. P. Ramnarain, E. J. Huff, and Y.-K. Wang. 1993. Ordered restriction maps of Saccharomyces cerevisiae chromosomes constructed by optical mapping. Science. 262: 110-114.
    • (1993) Science , vol.262 , pp. 110-114
    • Schwartz, D.C.1    Li, X.2    Hernandez, L.I.3    Ramnarain, S.P.4    Huff, E.J.5    Wang, Y.-K.6
  • 39
    • 0028876064 scopus 로고
    • Video light microscopy of 670-kb DNA in a hanging drop: Shape of the envelop of DNA
    • Sewer, P., A. Estrada, and R. A. Harris. 1995. Video light microscopy of 670-kb DNA in a hanging drop: shape of the envelop of DNA. Biophys. J. 69:2649-2660.
    • (1995) Biophys. J. , vol.69 , pp. 2649-2660
    • Sewer, P.1    Estrada, A.2    Harris, R.A.3
  • 40
    • 0030024985 scopus 로고    scopus 로고
    • Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules
    • Smith, S. B., Y. Cui, and C. Bustamante. 1996. Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules. Science. 271:795-798.
    • (1996) Science , vol.271 , pp. 795-798
    • Smith, S.B.1    Cui, Y.2    Bustamante, C.3
  • 42
    • 0028019332 scopus 로고
    • Stretched DNA structures observed with atomic force microscopy
    • Thundat, T., D. P. Allison, and R. J. Warmack. 1994. Stretched DNA structures observed with atomic force microscopy. Nucleic Acids Res. 22:4224-4228.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4224-4228
    • Thundat, T.1    Allison, D.P.2    Warmack, R.J.3
  • 43
    • 0026688439 scopus 로고
    • DNA electrophoresis in microlithographic arrays
    • Volkmuth, W. D., and R. H. Austin. 1992. DNA electrophoresis in microlithographic arrays. Nature. 358:600-602.
    • (1992) Nature , vol.358 , pp. 600-602
    • Volkmuth, W.D.1    Austin, R.H.2
  • 44
    • 0014686390 scopus 로고
    • Mapping of deletions and substitutions in heteroduplex DNA molecules of bacteriophage lambda by electron microscopy
    • Westmoreland, B. C., W. Szybalski, and H. Ris. 1969. Mapping of deletions and substitutions in heteroduplex DNA molecules of bacteriophage lambda by electron microscopy. Science. 163:1343-1348.
    • (1969) Science , vol.163 , pp. 1343-1348
    • Westmoreland, B.C.1    Szybalski, W.2    Ris, H.3
  • 45
    • 0015295314 scopus 로고
    • Bacteriophage T7 DNA replication: A linear replicating intermediate
    • Wolfson, J., D. Dressier, and M. Magazin. 1971. Bacteriophage T7 DNA replication: a linear replicating intermediate. Prof. Natl. Acad. Sci. USA. 69:499-504.
    • (1971) Prof. Natl. Acad. Sci. USA , vol.69 , pp. 499-504
    • Wolfson, J.1    Dressier, D.2    Magazin, M.3
  • 46
    • 0028831314 scopus 로고
    • Determination of heat-shock transcription factor 2 stoichiometry at looped DNA complexes using scanning force microscopy
    • Wyman, C., E. Grotkopp, C. Bustamante, and H. C. M. Nelson. 1995. Determination of heat-shock transcription factor 2 stoichiometry at looped DNA complexes using scanning force microscopy. EMBO J. 14:117-123.
    • (1995) EMBO J. , vol.14 , pp. 117-123
    • Wyman, C.1    Grotkopp, E.2    Bustamante, C.3    Nelson, H.C.M.4
  • 47
    • 0027626858 scopus 로고
    • Effect of probe force on the resolution of atomic force microscopy of DNA
    • Yang, J., and Z. Shao. 1993. Effect of probe force on the resolution of atomic force microscopy of DNA. Ultramicroscopy. 50:157-170.
    • (1993) Ultramicroscopy , vol.50 , pp. 157-170
    • Yang, J.1    Shao, Z.2
  • 48
    • 0028221231 scopus 로고
    • DNA stretching on functionalized gold surfaces
    • Zimmerman, R. M., and E. C. Cox. 1994. DNA stretching on functionalized gold surfaces. Nucleic Acids Res. 22:492-497.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 492-497
    • Zimmerman, R.M.1    Cox, E.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.