-
1
-
-
0003150431
-
Introduction to the proteinase inhibitors: X-ray crystallography
-
Barrett, A.J., Salvesen, G. (eds.). Amsterdam: Elsevier
-
Read, R., James, M.N.G. Introduction to the proteinase inhibitors: X-ray crystallography. In: "Proteinase Inhibitors." Barrett, A.J., Salvesen, G. (eds.). Amsterdam: Elsevier, 1986:301-336.
-
(1986)
Proteinase Inhibitors
, pp. 301-336
-
-
Read, R.1
James, M.N.G.2
-
2
-
-
0025123333
-
The structure of protein-protein recognition sites
-
Janin, J., Chothia, C. The structure of protein-protein recognition sites. J. Biol. Chem. 265:16027-16030, 1990.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 16027-16030
-
-
Janin, J.1
Chothia, C.2
-
3
-
-
0026530977
-
Natural protein proteinase inhibitors and their interaction with proteinases
-
Bode, W., Huber, R. Natural protein proteinase inhibitors and their interaction with proteinases. Eur. J. Biochem. 204:433-451, 1992.
-
(1992)
Eur. J. Biochem.
, vol.204
, pp. 433-451
-
-
Bode, W.1
Huber, R.2
-
6
-
-
0022961424
-
Protein inhibitors of serine proteinases -Mechanism and classification
-
Friedman, M. (ed.). New York: Plenum
-
Laskowski, M., Jr. Protein inhibitors of serine proteinases -Mechanism and classification. In: "Nutritional and Toxicological Significance of Enzyme Inhibitors." Friedman, M. (ed.). New York: Plenum, 1986:1-17.
-
(1986)
Nutritional and Toxicological Significance of Enzyme Inhibitors
, pp. 1-17
-
-
Laskowski Jr., M.1
-
7
-
-
0014211618
-
On the size of the active site in proteases. I. Papain
-
Schechter, P., Berger, A. On the size of the active site in proteases. I. Papain. Biochem. Biophys. Res. Commun. 27:157-162, 1967.
-
(1967)
Biochem. Biophys. Res. Commun.
, vol.27
, pp. 157-162
-
-
Schechter, P.1
Berger, A.2
-
8
-
-
0027139338
-
Affinity and specificity of serine endopeptidase-protein inhibitor interactions
-
Krystek, S., Stouch, T., Novotny, J. Affinity and specificity of serine endopeptidase-protein inhibitor interactions. J. Mol. Biol. 234:661-679, 1993.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 661-679
-
-
Krystek, S.1
Stouch, T.2
Novotny, J.3
-
10
-
-
0025082684
-
Additivity of mutational effects in proteins
-
Wells, J.A. Additivity of mutational effects in proteins. Biochemistry 29:8509-8517, 1990.
-
(1990)
Biochemistry
, vol.29
, pp. 8509-8517
-
-
Wells, J.A.1
-
11
-
-
0031024397
-
Interscaffolding additivity. Association of P, variants of eglin c and of turkey ovomucoid third domain with serine proteinases
-
Qasim, M.A., Ganz, P.J., Saunders, C.W., Bateman, K.S., James, M.N.G., Laskowski, M., Jr. Interscaffolding additivity. Association of P, variants of eglin c and of turkey ovomucoid third domain with serine proteinases. Biochemistry 36:1598-1607, 1997.
-
(1997)
Biochemistry
, vol.36
, pp. 1598-1607
-
-
Qasim, M.A.1
Ganz, P.J.2
Saunders, C.W.3
Bateman, K.S.4
James, M.N.G.5
Laskowski Jr., M.6
-
12
-
-
0001079105
-
On the use of sequence homologies to predict protein structure: Identical pentapeptides can have completely different conformations
-
Kabsch, W., Sander, C. On the use of sequence homologies to predict protein structure: Identical pentapeptides can have completely different conformations. Proc. Natl. Acad. Sci. USA 81:1075-1078, 1984.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 1075-1078
-
-
Kabsch, W.1
Sander, C.2
-
13
-
-
0027448801
-
Origins of structural diversity within sequentially identical hexapeptides
-
Cohen, B.I., Presnell, S.R., Cohen, F.E. Origins of structural diversity within sequentially identical hexapeptides. Protein Sci. 2:2134-2145, 1993.
-
(1993)
Protein Sci.
, vol.2
, pp. 2134-2145
-
-
Cohen, B.I.1
Presnell, S.R.2
Cohen, F.E.3
-
14
-
-
0021779081
-
Turns in peptides and proteins
-
Rose, G.D., Gierasch, L.M., Smith, J.A. Turns in peptides and proteins. Adv. Protein Chem. 37:1-109, 1985.
-
(1985)
Adv. Protein Chem.
, vol.37
, pp. 1-109
-
-
Rose, G.D.1
Gierasch, L.M.2
Smith, J.A.3
-
15
-
-
0025610743
-
A common pentapeptide conformation occurs in viral acid proteases and other proteins
-
Karpen, M.E., Neet, K.E., de Haseth, P.L. A common pentapeptide conformation occurs in viral acid proteases and other proteins. J. Mol. Biol. 216:201-206, 1990.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 201-206
-
-
Karpen, M.E.1
Neet, K.E.2
De Haseth, P.L.3
-
16
-
-
0022981913
-
Loops in globular proteins: A novel category of secondary structure
-
Leszczynski, J.F., Rose, G.D. Loops in globular proteins: A novel category of secondary structure. Science 234:849-855, 1986.
-
(1986)
Science
, vol.234
, pp. 849-855
-
-
Leszczynski, J.F.1
Rose, G.D.2
-
17
-
-
0023955009
-
Analysis, design and modification of loop regions in proteins
-
Thornton, J.M., Sibanda, B.L., Edwards, M.S., Barlow, D.J. Analysis, design and modification of loop regions in proteins. BioEssays 8:63-69, 1988.
-
(1988)
BioEssays
, vol.8
, pp. 63-69
-
-
Thornton, J.M.1
Sibanda, B.L.2
Edwards, M.S.3
Barlow, D.J.4
-
18
-
-
0024391832
-
Conformation of β-hairpins in protein structures. A systematic classification with applications to modelling by homology, electron density fitting and protein engineering
-
Sibanda, B.L., Blundell, T.L., Thornton, J.M. Conformation of β-hairpins in protein structures. A systematic classification with applications to modelling by homology, electron density fitting and protein engineering. J. Mol. Biol. 206: 759-777, 1989.
-
(1989)
J. Mol. Biol.
, vol.206
, pp. 759-777
-
-
Sibanda, B.L.1
Blundell, T.L.2
Thornton, J.M.3
-
19
-
-
0030589039
-
Structural families of homologous proteins: Automatic classification, modelling and application to antibodies
-
Martin, A.C.R., Thornton, J.M. Structural families of homologous proteins: Automatic classification, modelling and application to antibodies. J. Mol. Biol. 263:800-815, 1996.
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 800-815
-
-
Martin, A.C.R.1
Thornton, J.M.2
-
20
-
-
0031557395
-
An automated classification of the structure of protein loops
-
Oliva, B., Bates, P.A., Querol, E., Aviles, F.X., Sternberg, M.J.E. An automated classification of the structure of protein loops. J. Mol. Biol. 266:814-830, 1997.
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 814-830
-
-
Oliva, B.1
Bates, P.A.2
Querol, E.3
Aviles, F.X.4
Sternberg, M.J.E.5
-
21
-
-
0031588926
-
Predicting the conformational class of short and medium size loops connecting regular secondary structures: Application to comparative modelling
-
Rufino, S.D., Donate, L.E., Canard, L.H.J., Blundell, T.L. Predicting the conformational class of short and medium size loops connecting regular secondary structures: Application to comparative modelling. J. Mol. Biol. 267:352-367, 1997.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 352-367
-
-
Rufino, S.D.1
Donate, L.E.2
Canard, L.H.J.3
Blundell, T.L.4
-
22
-
-
0031564640
-
PDB-based protein loop prediction: Parameters for selection and methods for optimization
-
van Vlijmen, H.W.T., Karplus, M. PDB-based protein loop prediction: Parameters for selection and methods for optimization. J. Mol. Biol. 267:975-1001, 1997.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 975-1001
-
-
Van Vlijmen, H.W.T.1
Karplus, M.2
-
23
-
-
0030039296
-
PROMOTIF - A program to identify and analyze structural motifs in proteins
-
Hutchinson, E.G., Thornton, J.M. PROMOTIF - A program to identify and analyze structural motifs in proteins. Protein Sci. 5:212-220, 1996.
-
(1996)
Protein Sci.
, vol.5
, pp. 212-220
-
-
Hutchinson, E.G.1
Thornton, J.M.2
-
24
-
-
0015222647
-
The interpretation of protein structures: Estimation of static accessibility
-
Lee, B.K., Richards, F.M. The interpretation of protein structures: Estimation of static accessibility. J. Mol. Biol. 55:379-400, 1971.
-
(1971)
J. Mol. Biol.
, vol.55
, pp. 379-400
-
-
Lee, B.K.1
Richards, F.M.2
-
25
-
-
0003742069
-
-
Department of Biochemistry & Molecular Biology, University College, London
-
Hubbard, S.J., Thornton, J.M. NACCESS computer program. Department of Biochemistry & Molecular Biology, University College, London, 1993.
-
(1993)
NACCESS Computer Program
-
-
Hubbard, S.J.1
Thornton, J.M.2
-
26
-
-
0017187836
-
The nature of the accessible and buried surface in proteins
-
Chothia, C. The nature of the accessible and buried surface in proteins. J. Mol. Biol. 105:1-14, 1976.
-
(1976)
J. Mol. Biol.
, vol.105
, pp. 1-14
-
-
Chothia, C.1
-
27
-
-
0024420202
-
Comparing short protein substructures by a method based on backbone torsion angles
-
Karpen, M.E., de Haseth, P.L., Neet, K.E. Comparing short protein substructures by a method based on backbone torsion angles. Proteins 6:155-167, 1989.
-
(1989)
Proteins
, vol.6
, pp. 155-167
-
-
Karpen, M.E.1
De Haseth, P.L.2
Neet, K.E.3
-
28
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T.A., Zou, J-Y, Cowan, S.W., Kjeldgaard, M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A. 47:110-119, 1991.
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
29
-
-
0025912338
-
Molecular recognition. Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors
-
Hubbard, S.J., Campbell, S.F., Thornton, J.M. Molecular recognition. Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors. J. Mol. Biol. 220:507-530, 1991.
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 507-530
-
-
Hubbard, S.J.1
Campbell, S.F.2
Thornton, J.M.3
-
30
-
-
0024834425
-
Structural determinants of the conformation of medium-sized loops in proteins
-
Tramontano, A., Chothia, C., Lesk, A.M. Structural determinants of the conformation of medium-sized loops in proteins. Proteins 6:382-394, 1989.
-
(1989)
Proteins
, vol.6
, pp. 382-394
-
-
Tramontano, A.1
Chothia, C.2
Lesk, A.M.3
-
31
-
-
0028175628
-
1H NMR determination of the three dimensional structures of mirror image forms of a Leu-5 variant of the trypsin inhibitor from Ecballium elaterium (EETI II)
-
1H NMR determination of the three dimensional structures of mirror image forms of a Leu-5 variant of the trypsin inhibitor from Ecballium elaterium (EETI II). Protein Sci. 3:291-302, 1994.
-
(1994)
Protein Sci.
, vol.3
, pp. 291-302
-
-
Nielsen, K.J.1
Alewood, D.2
Andrews, J.3
Kent, S.B.H.4
Craik, D.J.5
-
32
-
-
0024395940
-
A 3D building blocks approach to analyzing and predicting structure of proteins
-
Unger, R., Harel, D., Wherland, S., Sussman, J.L. A 3D building blocks approach to analyzing and predicting structure of proteins. Proteins 5:355-373, 1989.
-
(1989)
Proteins
, vol.5
, pp. 355-373
-
-
Unger, R.1
Harel, D.2
Wherland, S.3
Sussman, J.L.4
-
33
-
-
0026035085
-
Insertion of an elastase-binding loop into interleukin-1β
-
Wolfson, A.J., Kanaoka, M., Lau, F.T.K., Ringe, D. Insertion of an elastase-binding loop into interleukin-1β. Protein Eng. 4:313-317, 1991.
-
(1991)
Protein Eng.
, vol.4
, pp. 313-317
-
-
Wolfson, A.J.1
Kanaoka, M.2
Lau, F.T.K.3
Ringe, D.4
-
34
-
-
0030959346
-
The thrombin E192Q-BPTI complex reveals gross structural rearrangements: Implications for the interaction with antithrombin and thrombomodulin
-
van de Locht, A., Bode, W., Huber, R., et al. The thrombin E192Q-BPTI complex reveals gross structural rearrangements: implications for the interaction with antithrombin and thrombomodulin. EMBO J. 16:2977-2984, 1997
-
(1997)
EMBO J.
, vol.16
, pp. 2977-2984
-
-
Van De Locht, A.1
Bode, W.2
Huber, R.3
-
35
-
-
0027050807
-
The refined 1.9-Å X-ray crystal structure of D-Phe-Pro-Arg chloromethylketone-inhibited human α-thrombin: Structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships
-
Bode, W., Turk, D., Karshikov, A. The refined 1.9-Å X-ray crystal structure of D-Phe-Pro-Arg chloromethylketone-inhibited human α-thrombin: Structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships. Protein Sci. 1:426-471, 1992.
-
(1992)
Protein Sci.
, vol.1
, pp. 426-471
-
-
Bode, W.1
Turk, D.2
Karshikov, A.3
-
36
-
-
0030580057
-
Antibody-antigen interactions: Contact analysis and binding site topography
-
MacCallum, R.M., Martin, A.C.R., Thornton, J.M. Antibody-antigen interactions: Contact analysis and binding site topography. J. Mol. Biol. 262:732-745, 1996.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 732-745
-
-
MacCallum, R.M.1
Martin, A.C.R.2
Thornton, J.M.3
-
37
-
-
0023099415
-
Ovomucoid third domains from 100 avian species. Isolation, sequence and hypervariability of enzyme-inhibitor contact residues
-
Laskowski, M., Jr., Kato, I., Ardelt, W., et al. Ovomucoid third domains from 100 avian species. Isolation, sequence and hypervariability of enzyme-inhibitor contact residues. Biochemistry 26:202-221, 1987.
-
(1987)
Biochemistry
, vol.26
, pp. 202-221
-
-
Laskowski Jr., M.1
Kato, I.2
Ardelt, W.3
|