-
1
-
-
0030025916
-
A computer analysis of primer and probe hybridization potential with bacterial small-subunit rRNA sequences
-
Brunk, C. F., E. Avaniss-Aghajani, and C. A. Brunk. 1996. A computer analysis of primer and probe hybridization potential with bacterial small-subunit rRNA sequences. Appl. Environ. Microbiol. 62:872-879.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 872-879
-
-
Brunk, C.F.1
Avaniss-Aghajani, E.2
Brunk, C.A.3
-
2
-
-
0027801562
-
Phylogenetic diversity of aggregate-attached vs. free-living marine bacterial assemblages
-
DeLong, E. F., D. G. Franks, and A. L. Alldredge. 1993. Phylogenetic diversity of aggregate-attached vs. free-living marine bacterial assemblages. Limnol. Oceanogr. 38:924-934.
-
(1993)
Limnol. Oceanogr.
, vol.38
, pp. 924-934
-
-
DeLong, E.F.1
Franks, D.G.2
Alldredge, A.L.3
-
3
-
-
0002960326
-
Nucleic acids II: Restriction site analysis
-
D. M. Hillis and C. Moritz (ed.), Sinauer Assoc., Inc., Sunderland, Mass.
-
Dowling, T. E., C. Moritz, and J. D. Palmer. 1990. Nucleic acids II: restriction site analysis, p. 250-317. In D. M. Hillis and C. Moritz (ed.), Molecular systematics. Sinauer Assoc., Inc., Sunderland, Mass.
-
(1990)
Molecular Systematics
, pp. 250-317
-
-
Dowling, T.E.1
Moritz, C.2
Palmer, J.D.3
-
4
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
5
-
-
0029035937
-
Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana
-
Haddad, A., F. Camacho, P. Durand, and S. C. Cary. 1995. Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana. Appl. Environ. Microbiol. 61:1679-1687.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1679-1687
-
-
Haddad, A.1
Camacho, F.2
Durand, P.3
Cary, S.C.4
-
6
-
-
0024190701
-
Applications of nucleic acid hybridization in microbial ecology
-
Holben, W. E., and J. M. Tiedje. 1988. Applications of nucleic acid hybridization in microbial ecology. Ecology 69:561-568.
-
(1988)
Ecology
, vol.69
, pp. 561-568
-
-
Holben, W.E.1
Tiedje, J.M.2
-
7
-
-
0027722962
-
Phylogenetic analysis of restriction site data
-
Holsinger, K. E., and R. K. Jansen. 1993. Phylogenetic analysis of restriction site data. Methods Enzymol. 224:439-455.
-
(1993)
Methods Enzymol.
, vol.224
, pp. 439-455
-
-
Holsinger, K.E.1
Jansen, R.K.2
-
8
-
-
8944249988
-
Inferring relatedness of a macromolecule to a sequence database without sequencing
-
Intelligent systems for molecular biology '96. in press. AAAI & MIT Press, Cambridge, Mass.
-
Kim, J., J. R. Cole, E. Torng, and S. Pramanik. Inferring relatedness of a macromolecule to a sequence database without sequencing. In Intelligent systems for molecular biology '96. Proceedings of the fourth international conference on computational biology, in press. AAAI & MIT Press, Cambridge, Mass.
-
Proceedings of the Fourth International Conference on Computational Biology
-
-
Kim, J.1
Cole, J.R.2
Torng, E.3
Pramanik, S.4
-
9
-
-
0019296687
-
A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. 1980. A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
10
-
-
0028170111
-
The Ribosomal Database Project
-
Maidak, B. L., N. Larsen, M. J. McCaughey, R. Overbeek, G. J. Olsen, K. Fogel, J. Blandy, and C. R. Woese. 1994. The Ribosomal Database Project. Nucleic Acids Res. 22:3485-3487.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3485-3487
-
-
Maidak, B.L.1
Larsen, N.2
McCaughey, M.J.3
Overbeek, R.4
Olsen, G.J.5
Fogel, K.6
Blandy, J.7
Woese, C.R.8
-
11
-
-
8944240107
-
-
Unpublished data
-
Moyer, C. L. Unpublished data.
-
-
-
Moyer, C.L.1
-
12
-
-
0028184602
-
Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii
-
Moyer, C. L., F. C. Dobbs, and D. M. Karl. 1994. Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl. Environ. Microbiol. 60:871-879.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 871-879
-
-
Moyer, C.L.1
Dobbs, F.C.2
Karl, D.M.3
-
13
-
-
0028976424
-
Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system. Loihi Seamount, Hawaii
-
Moyer, C. L., F. C. Dobbs, and D. M. Karl. 1995. Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system. Loihi Seamount, Hawaii. Appl. Environ. Microbiol. 61:1555-1562.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1555-1562
-
-
Moyer, C.L.1
Dobbs, F.C.2
Karl, D.M.3
-
14
-
-
0028055018
-
The winds of (evolutionary) change: Breathing new life into microbiology
-
Olsen, G. J., C. R. Woese, and R. Overbeek. 1994. The winds of (evolutionary) change: breathing new life into microbiology. J. Bacteriol. 176:1-6.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1-6
-
-
Olsen, G.J.1
Woese, C.R.2
Overbeek, R.3
-
15
-
-
0002842298
-
The analysis of natural microbial populations by ribosomal RNA sequences
-
Pace, N. R., D. A. Stahl, D. J. Lane, and G. J. Olsen. 1986. The analysis of natural microbial populations by ribosomal RNA sequences. Adv. Microb. Ecol. 9:1-55.
-
(1986)
Adv. Microb. Ecol.
, vol.9
, pp. 1-55
-
-
Pace, N.R.1
Stahl, D.A.2
Lane, D.J.3
Olsen, G.J.4
-
16
-
-
0027146060
-
Desulfurella acetivorans, a thermophilic, acetate-oxidizing and sulfur-reducing organism, represents a distinct lineage within the Proteobacteria
-
Rainey, F. A., R. Toalster, and E. Stackebrandt. 1993. Desulfurella acetivorans, a thermophilic, acetate-oxidizing and sulfur-reducing organism, represents a distinct lineage within the Proteobacteria. Syst. Appl. Microbiol. 16: 373-379.
-
(1993)
Syst. Appl. Microbiol.
, vol.16
, pp. 373-379
-
-
Rainey, F.A.1
Toalster, R.2
Stackebrandt, E.3
-
17
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
18
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt, E., and B. M. Goebel. 1994. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44:846-849.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
19
-
-
0024005650
-
Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology
-
Stahl, D. A., B. Flesher, H. R. Mansfield, and L. Montgomery. 1988. Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology. Appl. Environ. Microbiol. 54:1079-1084.
-
(1988)
Appl. Environ. Microbiol.
, vol.54
, pp. 1079-1084
-
-
Stahl, D.A.1
Flesher, B.2
Mansfield, H.R.3
Montgomery, L.4
-
20
-
-
0001897782
-
Convergent evolution and non-parametric inferences from restriction fragment and sequence data
-
B. Weir (ed.), Marcel Dekker, New York
-
Templeton, A. R. 1983. Convergent evolution and non-parametric inferences from restriction fragment and sequence data, p. 151-179. In B. Weir (ed.), Statistical analysis of DNA sequence data. Marcel Dekker, New York.
-
(1983)
Statistical Analysis of DNA Sequence Data
, pp. 151-179
-
-
Templeton, A.R.1
-
21
-
-
0001830451
-
Approaches to the comprehensive evaluation of prokaryotic diversity of a habitat
-
D. Allsopp, D. L. Hawksworth, and R. R. Colwell (ed.), CAB International North America, Tucson, Ariz
-
Tiedje, J. M. 1995. Approaches to the comprehensive evaluation of prokaryotic diversity of a habitat, p. 73-87. In D. Allsopp, D. L. Hawksworth, and R. R. Colwell (ed.), Microbial diversity and ecosystem function. CAB International North America, Tucson, Ariz.
-
(1995)
Microbial Diversity and Ecosystem Function
, pp. 73-87
-
-
Tiedje, J.M.1
-
23
-
-
0028139018
-
Isolation and characterization of Desulfitobacterium dehalogenans gen. nov., sp. nov., an anaerobic bacterium which reductively dechlorinates chlorophenolic compounds
-
Utkin, I., C. R. Woese, and J. Wiegel. 1994. Isolation and characterization of Desulfitobacterium dehalogenans gen. nov., sp. nov., an anaerobic bacterium which reductively dechlorinates chlorophenolic compounds. Int. J. Syst. Bacteriol. 44:612-619.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 612-619
-
-
Utkin, I.1
Woese, C.R.2
Wiegel, J.3
-
24
-
-
0026050670
-
A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
-
Winker, S., and C. R. Woese. 1991. A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics. Syst. Appl. Microbiol. 14:305-310.
-
(1991)
Syst. Appl. Microbiol.
, vol.14
, pp. 305-310
-
-
Winker, S.1
Woese, C.R.2
-
25
-
-
0028387348
-
There must be a prokaryote somewhere: Microbiology's search for itself
-
Woese, C. R. 1994. There must be a prokaryote somewhere: microbiology's search for itself. Microbiol. Rev. 58:1-9.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 1-9
-
-
Woese, C.R.1
-
26
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese, C. R., O. Kandler, and M. L. Wheelis. 1990. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 87:4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
27
-
-
0029031784
-
Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth on toluene and description of Azoarcus tolulyticus sp. nov
-
Zhou, J., M. R. Fries, J. C. Chee-Sanford, and J. M. Tiedje. 1995. Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth on toluene and description of Azoarcus tolulyticus sp. nov. Int. J. Syst. Bacteriol. 45:500-506.
-
(1995)
Int. J. Syst. Bacteriol.
, vol.45
, pp. 500-506
-
-
Zhou, J.1
Fries, M.R.2
Chee-Sanford, J.C.3
Tiedje, J.M.4
|