Microsatellite gene diversity analysis in anadromous arctic char, Salvelinus alpinus, from Labrador, Canada

Canadian Journal of Fisheries and Aquatic Sciences

Volumn 55, Issue 5, 1998, Pages 1264-1272

  Bernatchez, Louis ^a   Dempson, J Brian ^b   Martin, Sylvain ^a  

^a UNIVERSITÉ LAVAL   (Canada)

^b FISHERIES AND OCEANS CANADA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

FISH; GENETIC ANALYSIS; GENETIC VARIATION; POPULATION STRUCTURE;

CANADA; LABRADOR;

ANIMALIA; SALVELINUS ALPINUS;

EID: 0031773186     PISSN: 0706652X     EISSN: None     Source Type: Journal    
DOI: 10.1139/f97-325     Document Type: Article

References (37)

1. Angers, B., and Bernatchez, L. 1998. Combined use of SMM and non-SMM methods to infer fine structure and evolutionary history of brook chair (Salvelinus fontinalis, Salmonidae) populations from microsatellites. Mol. Biol. Evol. 15: 143-159.
2. Angers, B., Bernatchez, L., Angers, A., and Desgroseillers, L. 1995. Specific microsatellite loci of brook charr (Salvelinus fontinalis Mitchill) reveals strong population subdivision on microgeographic scale. J. Fish Biol. 47(Suppl. A): 177-185.
3. Bernatchez, L. 1996. Réseau de suivi environnemental du complexe La Grande. Caractérisation génétique des formes naines et normales de grand corégone du réservoir Caniapiscau et du lac Sérigny à l'aide de marqueurs microsatellites. Rapport présenté par l'université Lavai à la Vice-présidence Environnement et Collectivités d'Hydro-Québec.
4. Bernatchez, L. 1997. Mitochondrial DNA analysis confirms the existence of two glacial races of rainbow smelt Osmerus mordax and their reproductive isolation in the St. Lawrence River estuary (Québec, Canada). Mol. Ecol. 6: 73-83.
5. Bernatchez, L., and Martin, S. 1996. Mitochondrial DNA diversity in anadromous rainbow smelt, Osmerus mordax Mitchill: a genetic assessment of the member-vagrant hypothesis. Can. J. Fish. Aquat. Sci. 53: 424-433
6. Brookfield, J.F.Y. 1996. A simple new method for estimating null allele frequency from heterozygote deficiency. Mol. Ecol. 5: 453-455.
7. Brunner, P., Douglas, M., and Bernatchez, L. 1998. Microsatellite and mitochondrial DNA assessment of population structure and stocking effects in arctic charr Salvelinus alpinus (Teleostei: Salmonidae) from central alpine lakes. Mol. Ecol. 7: 209-223.
8. Cavalli-Sforza, L.L., and Edwards, A.W.F. 1967. Phylogenetic analysis: models and estimation procedures. Am. J. Hum. Gen. 19: 233-257.
9. Davidson, W.S., Birt, T.P. , and Green, J.M. 1989. A review of genetic variation in Atlantic salmon, Salmo salar L., and its importance for stock identification, enhancement programmes and aquaculture. J. Fish Biol. 34: 547-560.
10. Dempson, J.B. 1995. Trends in population characteristics of an exploited anadromous arctic charr, Salvelinus alpinus, stock in northern Labrador. Nord. J. Freshwater Res. 71: 197-216.
11. Dempson, J.B., and Kristofferson, A.H. 1987. Spatial and temporal aspects of the ocean migration of anadromous Arctic charr. Am. Fish. Soc. Symp. 1: 340-357.
12. Dempson, J.B., and Shears, M. 1994. Status report for northern Labrador arctic charr stocks in 1994. Dep. Fish. Oceans Atl. Fish. Res. Doc. No. 95/76.
13. Felsenstein, J. 1993. PHYLIP (Phylogeny inference package), version 3.5c edition. Department of Genetics, SK-50, University of Washington, Seattle.
14. Fontaine, P.-M., Dodson, J.J., Bernatchez, L., and Slettan, A. 1997. A genetic test of metapopulation structure in Atlantic salmon (Salmo salar) using microsatellites. Can. J. Fish. Aquat. Sci. 54: 2434-2442.
15. Goldstein, D.B., Linares, A.R., Cavalli-Sforza, L.L., and Feldman, M.W. 1995. An evaluation of genetic distances for use with microsatellite loci. Genetics, 139: 463-471.
16. Gyselman, E.C. 1994. Fidelity of anadromous Arctic charr (Salvelinus alpinus) to Nauyuk Lake, N.W.T., Canada. Can. J. Fish. Aquat. Sci. 51: 1927-1934.
17. Hartl, D.L., and Clark, A.G. 1989. Principles of population genetics. Sinauer Associates Inc, Sunderland, Mass.
18. Hedrick, P.W., Hedgecock, D., and Hamelberg, S. 1995. Effective population size in winter-run chinook salmon. Conserv. Biol. 9: 615-624.
19. Jarne, P.J., and Lagoda, J.L. 1996. Microsatellites, from molecules to populations and back. TREE, 11: 424-429.
20. Johnson, L. 1980. The arctic charr, Salvelinus alpinus. In Charrs: salmonid fishes of the genus Salvelinus. Edited by E.K. Balon. Dr. W. Junk, The Hague, Netherlands, pp. 15-98.
21. Michalakis, Y., and Excoffier, L. 1996. A generic estimation of population subdivision using distances between alleles with special reference for microsatellite loci. Genetics, 142: 1061-1064.
22. Morris, D.B., Richard, K.R, and Wright, J.M. 1996. Microsatellites from rainbow trout (Oncorhynchus mykiss) and their use for genetic study of salmonids. Can. J. Fish. Aquat. Sci. 53: 120-126.
23. Nei, M. 1987. Molecular evolutionary genetics. Columbia University Press, New York.
24. O'Reilly, P.T., Hamilton, L.C., McConnell, S.K., and Wright, J.M. 1996. Rapid analysis of genetic variation in Atlantic salmon (Salmo salar) by PCR multiplexing of dinucleotide and tetra-nucleotide microsatellites. Can. J. Fish. Aquat. Sci. 53: 2292-2298.
25. Osinov, A.G., Pavlov, S.D., and Maksimov, V.A. 1996. Allozyme variation and genetic differentiation in populations of Arctic charr Salvelinus alpinus from the Baltic Sea - Taimyr part of the range. Russ. J. Gen. 32: 474-485.
26. Presa, P., and Guyomard, R. 1996. Conservation of microsatellites in three species of salmonids. J. Fish Biol. 49: 1326-1329.
27. Quinn, T.P. 1984. Homing and straying in Pacific salmon. In Mechanisms of migration in fishes. Edited by J.D. McCleave, G.P. Arnold, J.J. Dodson, and W.H. Neill. Plenum, New York, pp. 357-362.
28. Raymond, M., and Rousset, F. 1995. GENEPOP (version 1.2): population genetics software for exact test and ecumenism. J. Hered. 86: 248-249.
29. Rousset, F., and Raymond, M. 1997. Statistical analyses of population genetic data: new tools, old concepts. TREE, 8: 313-317.
30. Sinclair, M., and Iles, T.D. 1988. Population richness of marine fish species. Aquat. Living Resour. 1: 71-83.
31. Schneider, S., Kueffer, J.-M., Roessli, D., and Excoffier, L. 1997. ARLEQUIN version 1: an exploratory populalion genetics software environment. Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland.
32. Takezaki, N., and Nei, M. 1996. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics, 144: 389-399.
33. Tessier, N., Bernatchez, L., and Wright, J.M. 1997. Population structure and impact of supportive breeding inferred from mitochondrial and microsatellite DNA analyses in landlocked Atlantic salmon (Salmo salar L.). Mol. Ecol. 7: 735-750.
34. Verspoor, E., and Jordan, W.C. 1989. Genetic variation at the Me-2 locus in the Atlantic salmon within and between rivers: evidence for its selective maintenance. J. Fish Biol. 35: 205-213.
35. Ward, R.D., Woodwark, M., and Skibinski, O.F. 1994. A comparison of genetic diversity levels in marine, freshwater, and anadromous fishes. J. Fish Biol. 44: 213-232.
36. Weir, B.S., and Cockerham, C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution, 38: 1358-1370.
37. Wilson, C.C., Hebert, P.D.N., Reist, J.D., and Dempson, J.B. 1996. Phylogeography and postglacial dispersal of arctic charr Salvelinus alpinus in North America. Mol. Ecol. 5: 187-197.