Cloning and characterization of the rpoH gene of Rhodobacter capsulatus

Molecular and General Genetics

Volumn 260, Issue 2-3, 1998, Pages 212-217

  Emetz, D ^a   Klug, G ^a  

^a UNIVERSITY HOSPITAL GIESSEN   (Germany)

Author keywords

Heat shock; Oxygen regulation; Rhodobacter capsulatus; Sigma factors

Indexed keywords

MESSENGER RNA; OXYGEN; SIGMA FACTOR;

ARTICLE; BACTERIAL GROWTH; GENE EXPRESSION; GENE MAPPING; HEAT SHOCK; IMMUNOBLOTTING; MOLECULAR CLONING; OXYGEN TENSION; PRIORITY JOURNAL; PROMOTER REGION; RHODOBACTER CAPSULATUS;

AMINO ACID SEQUENCE; CLONING, MOLECULAR; GENE EXPRESSION REGULATION, BACTERIAL; HEAT; HEAT-SHOCK PROTEINS; MOLECULAR SEQUENCE DATA; OXYGEN; RHODOBACTER CAPSULATUS; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY, AMINO ACID; SIGMA FACTOR; TRANSCRIPTION FACTORS;

BACTERIA (MICROORGANISMS); RHODOBACTER CAPSULATUS; RHODOPSEUDOMONAS;

EID: 0031767767     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380050888     Document Type: Article

References (36)

1. Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K (1992) Short protocols in molecular biology. John Wiley and Sons, New York
2. Barany F (1985) Two-codon insertion mutagenesis of plasmid genes by using single-stranded hexameric oligonucleotides. Proc Natl Acad Sci USA 82:4204-4206
3. Bukau B (1993) Regulation of the Escherichia coli heat-shock response. Molecular Microbiology 9:671-680
4. Cannon W, Missailidis S, Austin S, Moore M, Drake A, Buck M (1996) Purification and activities of the Rhodobacter capsulatus RpoN (sigma N) protein. Mol Microbiol 21:233-245
5. Cowing DW, Bardwell JCA, Craig EA, Woolford C, Hendrix RW, Gross CA (1985) Consensus sequence for Escherichia coli heat shock gene promoters. Proc Natl Acad Sci USA 82:2679-2683
6. Cullen PJ, Kaufman CK, Bowman WC, Kranz RG (1997) Characterization of the Rhodobacter capsulatus housekeeping RNA polymerase. In vitro transcription of photosynthesis and other genes. J Bacteriol 272:27266-27273
7. E is an essential Sigma Factor in Escherichia coli. J Bacteriol 179:6862-6864
8. Drews G (1976) Mikrobiologisches Praktikum (3rd edn). Springer Verlag, Berlin-Heidelberg-New York
9. Drews G, Imhoff JF (1991) Phototrophic purple bacteria. In: Shiveley JM, Barton LL (eds) Variations in autotrophic life. Academic Press, London, pp 51-97
10. Forrest ME, Beatty JT (1987) Purification of Rhodobacter capsulatus RNA polymerase and its use for in vitro transcription. FEBS Lett 212:28-34
11. Heck C, Rothfuchs R, Jäger A, Rauhut R, Klug G (1996) Effect of the pufQ-pufB intercistronic region on puf mRNA stability in Rhodobacter capsulatus. Mol Microbiol 20:1165-1178
12. Hübner P, Willison JC, Vignais PM, Bickle TA (1991) Expression of regulatory nif genes in Rhodobacter capsulatus. J Bacteriol 173:2993-2999
13. Joshi HM, Tabita FR (1996) A global two component signal transduction system that integrates the control of photosynthesis, carbon dioxide assimilation, and nitrogen fixation. Proc Natl Acad Sci USA 93:14515-14520
14. Kansy JW, Kaplan S (1989) Purification, characterization, and transcriptional analyses of RNA polymerases from Rhodobacter spaeroides cells grown chemotrophically and phototrophically. J Biol Chem 264:13751-13759
15. Karls RK, Jin DJ, Donohue TJ (1993) Transcription properties of RNA polymerase holoenzyme isolated from the purple nonsulfur bacterium Rhodobacter sphaeroides. J Bacteriol 175:7629-7638
16. 32 family. J Bacteriol 180:10-19
17. Lee WT, Terlersky, KC Tabita FR, (1997) Cloning and characterization of two groESL operons of Rhodobacter spaeroides: transcriptional regulation of the heat-induced groESL operon. J Bacteriol 179:487-495
18. 70 family: sequence conservation and evolutionary relationships. J Bacteriol 174:3843-3849
19. MacGregor BJ, Karls RK, Donohue TJ (1998) Transcription of the Rhodobacter sphaeroides cycA P1 promoter by alternate RNA polymerase holoenzyme. J Bacteriol 180:1-9
20. 32 homologs from gram negative bacteria: conserved mRNA and protein segment for heat shock regulation. Nucleic Acids Res 23:4383-4390
21. Narberhaus F, Kowarik M, Beck C, Hennecke, H (1998) Promotor selectivity of the Bradyrhizobium japonicum RpoH transcription factors in vivo and in vitro. J. Bacteriol. 180:2395-2401
22. 1 and three small heat shock genes. J Bacteriol. 178:5337-5346
23. Nickel CM, Vanderkerckhove J, Beyer P, Tadros MH (1997) Molecular analysis of the Rhodobacter capsulatus chaperone dnaKJ operon: purification and characterization of DnaK. Gene 192:251-259
24. Pasternak C, Assemat K, Clément-Métral J, Klug G (1997) Thioredoxin is essential for Rhodobacter spaeroides growth by aerobic and anaerobic respiration. Microbiology 4:83-91
25. Pasternak C, Chen W, Heck C, Klug G (1996) Cloning, nucleotide sequence and characterization of the rpoD gene encoding the primary sigma factor of Rhodobacter capsulatus. Gene 176:177-184
26. Reisenauer A, Mohr CD, Shapiro L (1996) Regulation of a heat shock sigma 32 homolog in Caulobacter crescentus. J Bacteriol 178:1919-1927
27. Sambrook J, Maniatis T, Fritsch EF (1989) Molecular cloning: a laboratory manual (2nd edn). Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
28. Servant P, Mazodier P (1996) Heat induction of hsp18 gene expression in Streptomyces albus G: transcriptional and post-transcriptional regulation. J Bacteriol 178:7031-7036
29. Simon R, Priefer U, Pühler A (1983) A broad host range mobilizationsystem for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Bio/Technology 1:784-791
30. Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
31. Von Gabain A, Belasco JG, Schottel JL, Chang ACY, Cohen SN (1983) Decay of mRNA in Escherichia coli: investigation of the fate of specific segments of transcripts. Proc Natl Acad Sci USA 80:653-657
32. Wu J, Newton A (1996) Isolation, identification, and transcriptional specificity of the heat shock sigma factor sigma 32 from Caulobacter crescentus. J Bacteriol 178:2094-2101
33. 32-dependent promoter. J Bacteriol 179:514-521
34. Yanisch-Perron C, Vieira J and Messing J (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119
35. Yura T, Nagai H, Mori H (1993) Regulation of the heat-shock response in bacteria. Annu Rev Microbiol 47:321-350
36. 32. J Bacteriol 170:3640-3649