An essential secondary structure in the 3′ untranslated region of the Mouse Hepatitis Virus genome

Advances in Experimental Medicine and Biology

Volumn 440, Issue , 1998, Pages 297-302

  Hsue, Bilan ^a   Masters, Paul S ^a  

^a WADSWORTH CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

ARTICLE; GENE SEQUENCE; MURINE HEPATITIS CORONAVIRUS; NONHUMAN; PRIORITY JOURNAL; RNA TRANSCRIPTION; SEQUENCE ANALYSIS; STOP CODON; STRUCTURE ANALYSIS; VIRUS GENOME; VIRUS RECOMBINATION; VIRUS REPLICATION;

3' UNTRANSLATED REGIONS; ANIMALS; CATTLE; GENOME, VIRAL; L CELLS (CELL LINE); MICE; MURINE HEPATITIS VIRUS; NUCLEIC ACID CONFORMATION; RNA, VIRAL;

BOVINAE; BOVINE CORONAVIRUS; CORONAVIRUS; MURINAE; MURINE HEPATITIS VIRUS;

EID: 0031721308     PISSN: 00652598     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4615-5331-1_39     Document Type: Article

References (13)

1. Fischer, F., Peng, D., Hingley, S.T., Weiss, S.R., and Masters, P.S., 1997, The internal open reading frame within the nucleocapsid gene of mouse hepatitis virus encodes a structural protein that is not essential for viral replication, J. Virol. 71:996-1003.
2. Hsue, B., and Masters, P.S., 1997, A bulged stem-loop structure in the 3′ untranslated region of the genome of the coronavirus mouse hepatitis virus is essential for replication, Submitted to J. Virol.
3. Kim, Y.-N., Jeong, Y.S., and Makino, S., 1993, Analysis of cis-acting sequences essential for coronavirus defective interfering RNA replication, Urology 197:53-63.
4. Koetzner, C.A., Parker, M.M., Ricard, C.S., Sturman, L.S., and Masters, P.S., 1992, Repair and mutagenesis of the genome of a deletion mutant of the coronavirus mouse hepatitis virus by targeted RNA recombination, J. Virol. 66:1841-1848.
5. Lin, Y.-J., and Lai, M.M.C., 1993, Deletion mapping of a mouse hepatitis virus defective interfering RNA reveals the requirement of an internal and discontiguous sequence for replication, J. Virol. 67:6110-6118.
6. Lin, Y.-J., Liao, C.-L., and Lai, M.M.C., 1994, Identification of the cis-acting signal for minus-strand RNA synthesis of a murine coronavirus: implications for the role of minus-strand RNA in RNA replication and transcription, J. Virol. 68:8131-8140.
7. Masters, P.S., Koetzner, C.A., Kerr, C.A., and Heo, Y., 1994, Optimization of targeted RNA recombination and mapping of a novel nucleocapsid gene mutation in the coronavirus mouse hepatitis virus, J. Virol. 68:328-337.
8. Parker, M.M., and Masters, P.S., 1990, Sequence comparison of the N genes of five strains of the coronavirus mouse hepatitis virus suggests a three domain structure for the nucleocapsid protein, Virology 179:463-468.
9. Peng, D., Koetzner, C.A., and Masters, P.S., 1995a, Analysis of second-site revertants of a murine coronavirus nucleocapsid protein deletion mutant and construction of nucleocapsid protein mutants by targeted RNA recombination, J. Virol. 69:3449-3457.
10. Peng, D., Koetzner, C.A., McMahon, T., Zhu, Y., and Masters, P.S., 1995b, Construction of murine coronavirus mutants containing interspecies chimeric nucleocapsid proteins, J. Virol. 69:5475-5484.
11. Stemmer, W.P.C. 1994a, Rapid evolution of a protein in vitro by DNA shuffling, Nature 370:389-391.
12. Stemmer, W.P.C. 1994b, DNA shuffling by random fragmentation and reassembly: In vitro recombination for molecular evolution, Proc. Natl. Acad. Sci. USA 91:10747-10751.
13. Van der Most, R.G., Luytjes, W., Rutjes, S., and Spaan, W.J.M., 1995, Translation but not the encoded sequence is essential for the efficient propogation of defective interfering RNAs of the coronavirus mouse hepatitis virus, J. Virol. 69:3744-3751.